Oncorhynchus kisutch (coho salmon): 109873273
Help
Entry
109873273 CDS
T09179
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03440
Homologous recombination
oki04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109873273
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109873273
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109873273
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109873273
03036 Chromosome and associated proteins [BR:
oki03036
]
109873273
03400 DNA repair and recombination proteins [BR:
oki03400
]
109873273
Peptidases and inhibitors [BR:
oki01002
]
Metallo peptidases
Family M67
109873273
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109873273
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
109873273
BRISC complex
109873273
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
109873273
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
109873273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
Motif
Other DBs
NCBI-GeneID:
109873273
NCBI-ProteinID:
XP_020320501
Ensembl:
ENSOKIG00005046536
LinkDB
All DBs
Position
LG28:9632028..9638480
Genome browser
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVIPHEAIGKVCLESAVEL
PRILCQEEQDTYRKIHSLTQLDPITKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNK
QNIIELQLEKERLTQELATM
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgcagttcacctcgaatcagatgcttttttggtttgcatgaatcatgca
ttaagtaccgagaaggaggaagtaatgggactctgcatcggggaggtggacaccaaccgc
atcgtccacattcattctgttattattctccgacgctcggacaagaggaaggatcgcgtg
gaaatttcgcctgagcagctgtcttcagcggcaaccgaagcggagaggttggctgaaatg
actggacggccgatgcgtgtagttggttggtaccactctcacccccacatcactgtgtgg
ccatcacatgtggatgtgaggacacaggctatgtatcaaatgatggaccagggctttgtt
gggctgatattctcctgcttcattgaggataagaacacaaaaaccggtcgagttctctac
acctgcttccagtctgtccaagcccagaaaggctctgagtacgagagaatcgagatccca
attcatgtgattccacacgaggccattgggaaagtgtgccttgaatcagcagtggagctt
cccagaatcctctgccaggaagagcaggacacctacagaaagattcacagcttaactcaa
ctggatccgatcacgaagatacacaatggctcagtcttcactaagaacctgtgcagccag
atgtctgctgtgagtggtcccctgctgcagtggctggaggatcgtctggagcagaacaaa
cagaacataattgagctgcagctggagaaagagagactaactcaggagttggcaaccatg
tga
DBGET
integrated database retrieval system
