Oncorhynchus kisutch (coho salmon): 109873283
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Entry
109873283 CDS
T09179
Name
(RefSeq) syntaxin-5-like isoform X1
KO
K08490
syntaxin 5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109873283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109873283
Membrane trafficking [BR:
oki04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
109873283
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Apolipoprotein
SIN1
Lys_phage
Motif
Other DBs
NCBI-GeneID:
109873283
NCBI-ProteinID:
XP_031663390
LinkDB
All DBs
Position
LG28:9004499..9021931
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AA seq
227 aa
AA seq
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MHPSVSIHIAYLTVCLFLFRRIGKDLSNTFAKLEKLTIFAKRKSLFDDKAVEIEELTYIV
KQDITSLNKQIAQLQGLVRSRQSQNGKHLQTHSNTIIVSLQSKLASMSNDFKSVLEVRTE
NLKEQKTRRDQFSQAPASSSSHLHASNFSNSLLMQDDCKKTGEVSVDMEFCASQQLQLIN
EQDSYIQRRADTMQNIESTIVELGSIFEQLAHMVKEQEETAEAVTQH
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcatccctctgtcagtatccatatagcctacttaactgtttgtttatttctgtttagg
aggattggaaaggacttgagtaacacttttgccaaactagaaaaactcacaatatttgcc
aaaaggaaatccctctttgatgacaaagctgtggagattgaggagttaacctacatcgtt
aaacaggacataaccagtttaaataaacagatagcacagctgcagggccttgtgcgttcc
agacaaagtcagaatggcaaacatctacagacacattccaacaccatcattgtctccctc
cagtcaaaactggcatcaatgtcaaacgactttaagtccgtgctggaggtcaggactgag
aacctcaaagagcagaaaactagaagagatcagttttctcaagctccagcatcctcctcc
tcccatctccatgccagcaacttcagtaactcattgttaatgcaggacgactgtaaaaag
acaggtgaggtctctgtagatatggaattctgcgccagtcaacagctgcaactcatcaat
gaacaggactcgtacatccagaggcgtgcagacaccatgcagaacatagagagcaccatc
gtagagctgggctctatattcgagcagctggcccacatggtgaaggagcaggaagagact
gcagaggcagtcacacagcactga
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