Oncorhynchus kisutch (coho salmon): 109873359
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Entry
109873359 CDS
T09179
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K02620
transcription factor 7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04310
Wnt signaling pathway
oki04519
Cadherin signaling
oki04520
Adherens junction
oki04916
Melanogenesis
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109873359
09133 Signaling molecules and interaction
04519 Cadherin signaling
109873359
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109873359
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
109873359
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109873359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109873359
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
109873359
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
ZNF704_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109873359
NCBI-ProteinID:
XP_031663434
Ensembl:
ENSOKIG00005036882
LinkDB
All DBs
Position
LG28:complement(37645827..37708922)
Genome browser
AA seq
500 aa
AA seq
DB search
MPQLSSGGGDDQGANDEMISFKDEGEQDEKIQENAFTERDLADLKSSLVNESETNQSSNA
AAVRRSQQNEHRGYQEKHREHLDSVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSMSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRPQSQDISGFYSLPPGG
VGQMPPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHPTGIPHPAI
MPPSGKLDHHDHYDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTL
KESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYPSWSARDNYDAGLRGCAGEK
SKADWGKKKRRKREKQQDSSADPGSPKKCRARFGLNQQTDWCGPCRRKKKCIRYLQGGWC
TSPTSSDGSAIDSPLSPVDGIPPQPASPLHNPLHLMPSKHTPLILSKSTTTELSFKALIE
SSQQHDNIHHHHDCTLPKSH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagtggcggaggagatgatcaaggagcaaacgatgaaatgatatcc
ttcaaggatgaaggcgaacaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaagtcgtctctggtgaatgaatcggagacaaatcaaagttcgaacgca
gcggcggtcagacgaagtcagcaaaacgaacatagaggttatcaagagaaacaccgggag
catctcgacagcgtgtccaaacatcaagatggagggatgtataaaacagcgtatccagga
tacccgtttctcatgctgcctgacccatacattcccaacggatccatgtccccatcttcc
aacaaagtttcagtggtccaacagtctcacgggatgcaccccctgacgtccctgctgccc
tacagcaacgaccacttcaaccccagcccccctcacctgcccacagacatgagtcagaaa
ggcgttcacaggccccagtcccaggacatctcaggtttctactccctaccccctggcggt
gtaggacagatgcccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctggggccaggcatgcaccccacggggatcccccacccagccatc
atgcccccttcaggcaaactggaccatcatgaccattacgacaggaacatgtacgctaag
cctcatcaggagcccaagcgggagaaggagcccaagaagccggtgatcaagaagcctctg
aatgctttcatgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacactg
aaggagagcgctgccatcaaccagatactgggccgaaggtggcacgccctgacccgggag
gagcaggccaagtactatgagctggccaggaaggagcggcagctacacatgcaactctac
cccagctggtccgccagagacaactacgatgcaggccttagagggtgcgcgggggaaaag
agtaaagctgattggggcaagaagaagagaagaaaaagagagaagcagcaggactcctca
gcagaccctggctctcctaagaaatgcagagctcgcttcggcctcaaccaacaaacggac
tggtgcggtccctgcaggaggaaaaagaagtgcattcgataccttcaaggaggatggtgc
accagccccacttcttccgatggaagcgctatagactcgcccctctcccccgttgacggc
atcccccctcagcctgcttcccccttgcacaaccccctgcacctcatgcccagcaaacac
acacctcttatcctctcaaaatccacaaccacagaactgtctttcaaagctttaatagaa
tcatcccaacagcacgacaatatccatcatcatcatgactgtaccctgcccaagtctcac
tag
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integrated database retrieval system
