Oncorhynchus kisutch (coho salmon): 109873381
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Entry
109873381 CDS
T09179
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109873381
04020 Calcium signaling pathway
109873381
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109873381
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109873381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
109873381
NCBI-ProteinID:
XP_031672206
Ensembl:
ENSOKIG00005003648
LinkDB
All DBs
Position
LG3:complement(21597587..21689811)
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AA seq
1939 aa
AA seq
DB search
MLATVGADFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMF
AIIGLDFYMGKFHRTCFRTDTGEQAAEFPCGLEAPARTCENGTVCQEYWIGPNYGITNFD
NILFAILTVFQCITMEGWVDILYNANDASGNTWNWIYFIPLIIIGSFFMLNLVLGVLSGE
FAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKHAEEMSPLDGAWY
KRKHNNPVLKRAKKSKNDLINAEEGEDHFTDISSVAPPGSPFTRASLKSSKNDSASYFRR
KEKRLRFTIRRLVKAQSFYWTVLCLVGLNTLCVAIVHYDQPEWLTYALYLAEFVFLGLFL
TEMSMKMYGLGPRNYFHSSFNCFDFGVIIGSIFEVIWAVVKPGASYGISVLRALRLLRIF
KVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGMFNFEEETPTTNF
DTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRWGMFSSIYFIVLTLFGNYTLLNVFLA
IAVDNLANAQELTKDEEEQEVAITKKMALQKVKEVKEVSPISAANISITAFVKQSRGALS
CSSSVCSVNSLMEQQKSLKMMSVWEQRTTQLRRHNLRASSEALYSELDPEERLRMSSALH
IRPDMKTHLDRPLVVEPHDGPGPMGYLKPWTPEETDNPGDPAGPQPRRRHRDRERPIDKA
NDIGDSGKEGRHHVHHSRSKDPNGTRCKEGKSERSHSREGGRRHHHQTSVDEGGGGGTGT
GEREHRHHHSHRQAREGNGTVNSGRKDERRSRHKDGRSGEICSRGENGANGERRRQKTHS
YRGKSTLEGEEHSERERGKGHRDRYVESEGDSMATSTQQDPGDQRWGTEIPEDSDNHRNV
RRTGRTAIHIPPVTITAPPGETTLIPMNSIDCETIPMNKEKKTLEALTRTGPRPILPYSS
MFVFGQTNMVRRLCHYIVSLRYFEMCILVVISMSSIALAAEDPVQANAPRNNVLKYLDYV
FTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGSKGKDISTIKS
LRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVIAVQLFKGKFF
YCSDESKALEKDCRGNFLDYDKDEVAAQPRVWKKYEFHYDNVLWAFLTLFTVSTGEGWPD
VLKHSVDATFEDQGPSPGYRIEISIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSE
CSLEKNERACIDFAINAKPLTRYMPENVQSFQYRMWKFVVSPPFEYAIMIMIALNTVVLM
MKFHGAPDFYEAMLKHFNIVFTALFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITD
IVVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAML
FFIYAIIGMQVFGNIELNEDTSITHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRA
CDERSGNLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLD
EFIRVWAEYDPAACGRIKYLDMYQILLHMSPPLGLGKKCPPRVAYKRLVKMNMPIADDNT
VHFTSTLMALIRTALEIKLASGMVAQRLSDADLKKELSQVWPSLSQKTMDLLVTPHKPNE
LTVGKVYAAMMIFDYYKQNRAKRLKEQQQQQQNATGSQGKVGALFKPILPLTHKQEKVKE
KAMTNVEPPCELLPQPQSQALPRPSSTLLNNGGTLPGHDGTMKGSSSWVSEKSREVHRPR
NKTPVQSGQSKDVPNLTIPQESVEMRKMDTSCSTVPGPGSGLESQGRAVSMPRLNAELQR
SKSRHSPGTLLAPVPDCSPVKRSASTHAPQRPQEVNLHEYTLERPSTQERPHHHHHRCHH
HRERDKKQRSLDRTPSTIG
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacagtgggagcagactttgacttgagaactctgagggcagtacgggtcctg
aggccactgaaactggtgtctggaatccctagtcttcaggtagttctaaagtccatcatg
aaagccatggtgcctctgctgcagattggcatgctgctcttcttcgctatactcatgttc
gccatcatcggcctggacttttacatgggcaagttccaccggacctgcttcaggactgat
acaggtgagcaggcagcagagttcccctgtggtttggaggctccagcgaggacctgtgaa
aatggaactgtgtgtcaggaatactggatcggccccaactacggcattaccaactttgac
aacatcctctttgctattctgaccgtcttccagtgcatcaccatggagggatgggtggac
atcctctataacgccaacgatgcctcagggaacacctggaactggatctacttcatcccc
ctcatcatcatcggatccttcttcatgctcaacctggtcctgggagtcctgtctggggag
tttgccaaggagcgtgagcgtgtggagaagaggcaggagtttctgaagcttcgcaggcag
cagcagatcgagagggagctgactggatacctggaatggatatgcaaggcagaggaggtg
atgctggcagaggaggacaagcatgctgaagagatgtctcctctggatggagcgtggtac
aagaggaaacacaacaacccagtgttaaaaagagccaagaagagcaagaatgacctgatc
aacgctgaggagggcgaagaccacttcactgacatctcatctgttgctcccccaggttct
ccattcacccgggccagcctgaagagcagcaagaacgacagtgcttcctacttccggagg
aaagagaagcggctccgcttcaccatcagacgcctggtcaaggcccagagcttctactgg
acagtcctgtgtctggtgggcctcaacacactgtgtgtggccattgttcattatgaccag
cctgagtggctcacctatgcgctgtatttggcagagtttgtattcctgggcttgtttctg
actgagatgtccatgaaaatgtatggactaggacctaggaactacttccattcctctttc
aattgttttgattttggagtgattataggcagtatttttgaggtgatctgggcagttgtg
aaacctggggcttcctacggcatcagtgtcctgcgagctctccgtctgctcaggattttc
aaagtcactaagtactggaactctctgaggaacctggtggtctctttactcaactccatg
aagtccattatcagcctgctcttccttctcttcctcttcatcgtggtgttcgccctactg
ggcatgcagctctttgggggaatgtttaattttgaagaggagacaccaacaacaaacttt
gacacctttccagcagccattctcacagttttccagattctgacaggagaggactggaat
gcggtgatgtatcatgggatagagtcccaggggggcgttcggtggggaatgttctcctct
atctacttcatcgttctcaccctgtttggaaactacactctgctcaatgtcttcttggcc
atcgctgttgacaaccttgcaaacgcacaggagctcactaaggacgaggaggagcaggag
gtggccatcactaagaagatggccctccagaaggtcaaggaggtgaaggaggtcagcccc
atttcggcagctaacatctccatcacagcttttgtaaagcaaagtcgaggtgcactctct
tgcagctcgtccgtctgcagcgttaattcacttatggagcagcagaagtctctgaagatg
atgtcagtgtgggagcagcgcaccactcagctgaggagacacaacctgcgggccagcagt
gaggccctgtacagcgagctggaccctgaggagaggctacgcatgtcctccgccctgcac
atccgccctgacatgaagacccacctggaccggcccctggtcgtggagccccacgatggc
cccggccccatgggctacctcaagccctggacccctgaggagacagataaccctggggac
ccagccggcccccagccacgtaggcgccaccgggacagggagagacccatcgacaaggcc
aatgacattggagattcaggcaaagagggtaggcaccatgtccatcacagtcgcagcaag
gaccccaacgggactcggtgcaaggaggggaagagtgagcggtcgcacagccgtgagggt
ggcaggaggcaccaccaccagacctcagtggacgagggaggtggagggggaactgggacg
ggagagagagagcaccgccaccaccactcccacagacaggccagagagggtaatggcact
gtcaacagcggacgcaaggatgagcgcaggtcacgccacaaagatggccgctcgggagag
atatgctccaggggagagaacggggccaatggggagaggaggagacagaagacccacagt
tacaggggcaagtccacactggagggagaggagcacagtgagagggagagggggaagggc
cacagggacagatatgtggaatctgagggcgactccatggccactagcacccagcaggac
cctggagatcagaggtggggcacagagatacctgaggactcagacaaccataggaatgtc
agacggacaggacggacggccatccacatcccccctgtcaccatcaccgccccgcctggg
gagaccacccttatccccatgaacagtatagactgtgagaccatacctatgaacaaggag
aagaagaccctggaggcgttgactcggaccggacccagacccatcctcccctacagctcc
atgtttgtgtttggccagaccaacatggtgcggcgtctgtgtcattacattgtgagcctg
cggtactttgagatgtgtatcctggtagtgatatctatgagtagcattgcattggctgct
gaggaccctgtccaggccaacgctccacgcaacaatgtgctcaagtatctggactacgtc
tttacgggagttttcacatttgagatggtgattaagatggttgacctgggccttcttctc
catcctggttcttacttcagagatctctggaacattctggacttcattgtggtcagtgga
gcactggtggcatttgcattttcagggtccaaaggaaaggacatcagcaccatcaagtcc
ctcagagttctgcgagtcttacggcccctcaagaccatcaagcgcctgccaaagctgaag
gctgtgtttgactgtgtggtcaactccctgaagaacgtcttcaacatcctcattgtctac
atgctcttcatgttcatcttcgctgtcatcgctgtgcaactgttcaaggggaagttcttc
tactgctccgatgagtccaaggcactggagaaggactgcagaggtaatttcctggactac
gataaggatgaggtggccgcccagcctcgggtgtggaagaagtatgagttccactatgac
aacgtgctgtgggccttcctcactctcttcactgtgtccaccggagagggctggcccgat
gttctgaagcactctgtggacgctacctttgaggaccagggtcccagtccaggctaccgt
atagagatctccatcttctacgtggtctacttcgtggtctttcccttcttcttcgtcaac
atctttgtggccttgatcatcattaccttccaggagcaaggggacaaggccatgtcagag
tgcagcctggagaaaaacgagagggcctgcattgacttcgccatcaacgccaagccactg
acgcgttacatgccagagaacgtgcagtccttccagtaccggatgtggaagtttgtggtg
tcacccccgtttgagtacgccattatgatcatgattgccctgaacaccgtggtgctcatg
atgaagttccatggagctccagacttctacgaggccatgttgaagcacttcaacatcgtc
ttcactgccctcttctctctggagtgtattctgaagatcatcgccttcggaccactgaac
tacctgaaggatgcctggaacgtgtttgactttgtgaccgtgctgggaagtataactgac
atcgtggtcacagaaatcaatacaacggaccggcttttgaacctgagttttctgaggctg
ttcagagcagctcgtctcatcaaactactgaggcaaggctacaccatccgtatcctgctg
tggaccttcgtccagtcctttaaggccctgccctatgtttgccttctgatagcaatgctg
ttcttcatctatgccatcatcggtatgcaggtgttcggaaacattgagctcaacgaggac
acatccatcactcaccacaacaacttccgcacttttcttcaggctctcatgctactgttc
aggagtgccacaggggaggcgtggcatgagatcatgctgtcgtgtttgagtcacagagcc
tgtgatgagaggtcaggcaacctggggaaggagtgtggcagtgactttgcctacttctac
tttgtgtccttcatcttcctctgctctttcctgatgcttaatctgtttgtggctgtgatc
atggataactttgaatacctgactcgagactcttctatactggggcctcatcatctggat
gagttcatccgtgtttgggctgagtacgaccctgctgcctgtggccgtatcaagtacctc
gatatgtatcagatactcctccacatgtccccacccttaggtttgggaaagaaatgtccg
ccaagagtcgcctacaagcggctagtcaagatgaacatgcccatcgctgatgacaacaca
gtccacttcacctctacactcatggccctgatccggacggctctggagatcaaactggcc
tcagggatggttgcccagcgtctctctgatgctgatctgaagaaagagctctcccaggtt
tggccaagcctctcacagaaaactatggatctgttggtgacaccacacaaacccaatgag
cttactgttgggaaggtgtatgcagccatgatgatctttgactactacaagcagaaccga
gccaagaggctcaaggaacagcaacagcagcagcagaatgctactggctcccaggggaag
gtgggggccctgtttaaaccaatactgcccctgactcacaagcaggagaaagtgaaggag
aaggccatgaccaacgtggagcctccctgtgagctactgcctcagccccagtctcaggcc
ctacctagacccagctccaccctgctcaacaacggaggcacactgccaggccatgacggc
accatgaaaggatcatcctcctgggtgtcagagaagtctagagaagtccacagacccagg
aataagacacctgtccaaagtggccagtctaaggatgtcccaaacctaaccatcccccag
gagtcagtggagatgaggaagatggacaccagttgcagcacagtgcctggtcctgggtct
ggactggagagccagggaagagctgtgtccatgcctcgcctcaacgcagagctgcagagg
agcaagtcgcgccactccccggggaccctgctggcacctgttcctgactgcagcccagtg
aaacgctctgcgtccacccacgccccccagcgcccccaggaggtgaacctgcatgaatac
accctggagaggcccagcacccaagaaaggcctcaccatcaccaccaccgctgccaccac
caccgagagagggacaagaagcagcggtcactggacaggacgccaagcaccattggttag
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