Oncorhynchus kisutch (coho salmon): 109873406
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Entry
109873406 CDS
T09179
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109873406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109873406
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
109873406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
109873406
NCBI-ProteinID:
XP_031664291
Ensembl:
ENSOKIG00005047410
LinkDB
All DBs
Position
LG28:32284170..32300263
Genome browser
AA seq
2238 aa
AA seq
DB search
MAASAASEGSTPGLCPSYAVICSFLERYGTLLDLPELTFPQLERYLQDTISVPKILVDLH
VKLLRKIGKSVSADRWEKYLVKVCHEFNSTWAWELENKGYRDMSVEYKTGILKHLCECQF
DDNVKFKTAINEEDPDQMRLLPIGKDKDGLMYWFQLDQDKNVRVYVEEQDDLDGSSWKCI
VRDRNSLAEILALLKTQIDPALLTKKEGEEEDEAKKYTGGEGEVKKTEDTSEDEEDKPSK
GTTSLVSPKTEITEKEESQLDESDAKSSLNGLKDESESKSQSEEPMVDDKVNINTRAIKE
EPMEVSESKESTATNATEPLAEKPCLTSQTEQTDEAKRKTANELQRAMKNDQQAKIPLKK
REMKLCENVDNNSGGGSSIFVRNPSVAPVKETPEVEETSKEISDAPVGTIECISDQMNGD
AQPTTEKSVNNGLRDSVDGKKQQTKAAAGEEREASAKEKINLDKEKEEMASNTEVAMANE
TSLQKMVPAEKESTEDSEEVKKSALKEAKSPSPLMTKPLTSSKDATSPPEKHSDCKEEQN
VKVSKWDLKVCRTEHTTYTSIETDENPLSSKSQKPDETKGTDSSITSQEVKSAVSKEIDK
TVVNKGGYPLSVVKDMEKPPCTKGTEKWSNPKNPETSVITKQTGRPDPITEKPDYSKCIK
MPTVVKNTEKPPDKEGVEKCDVSKDIKTSVIKKTELSEKSKDAENLAISQETNTSSFLKK
ADKPVSNKEAEKLESIKETDKSLVIKMTVKPEASKHTEKCDNPKDNKMSAVTKEKPAVGI
DAKAAAEVNKKAVLEEDFSASICKDEMGTVAKATKTQSGPKDMEMADVSEKTTQSQLGEP
KKVEKSATPKDIGKSVTPKDAEKCATPKDTEKSTKLVTPKDAEKCATPKDTEKSAMPKDT
VKYAKSAALKDAEKLATPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTP
KDAEKSAKSATPTPKDAEKSGKSATPTPKDAEKSGKSATPTPKDAEKSAKSATPTPKDAE
KSAKSATPTPKDAENSAKSATPTPKVAEKSAKSATPTPKVAEKSAKSATPTPKDAEKSAK
SATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATP
TPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKD
AEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSAIPTPKDAEKSAKSATPTPKDAEKS
AKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKDAEKSAKSATPTPKVAEKSAKNT
ETTSKKIVLSSRGQKPDTEETEKLADTKPVAEKGEKLVTFQDAKQLPSLKKSVPVEVKQE
EPMEMRSEKSTHDNIKIKGHAEKGWPKKAVKSGVKSETNPIKHPKPMNCDASSEKQAISK
KASSLTEGETDKSQDKVIKEDATTQGFPPKEDGSKPDHPKKNDKKEDDGTEKDDKNSTVE
EKLGQAKASEGSEEDDNKEDEDKGEKKDAGTTSEIQEEGIRLKIRGITHRRRAELQRKER
DSGSDTGETGRSLRRSPRICRPTAKGVEFQDRRMEKKEATPPVEKGDEEKTVQRKPREKV
DQDGLYKSKGRRRRKTRWSNTRTQRRKNNDSGEDDESESSEEESEEDNSDESFKVERGKR
RKRNRERHSDDSDTSSDDDLPPNDDPCKHCGFPNHPELILLCDSCDSGYHTACLRPPLMI
IPDGEWFCPPCQHKLLCDKLEEQLTNLDASLKKRERAERRKERLVYVGISVENIITPSLE
VEEEREEEVVKKEKKERTKSWGRRSTRAKKSISYRFDEFDEAIEEAIEEDIREADGGGAG
RGKDMANITGHSRGKDMSTILAAGEGGEGKENGCLPRPNASQRRKKRRRLNDLDSDSTME
EEESEDEFRLSDSTEEEEFVASGKSDAESEVAVDSNDDSDFGSTQRRTARTRRPAKRQRS
AQLRRRRTPRRYADDEEETSEEEMVSEGSSEFSDSDLDCSRRRSRRSQTTKQVNYCESSG
DSDGSKANTNRDKVKPWRRLASSDSEASSSRGSDDSERERTRLKRRADSSEKESQQHRRR
LSLKRRRASEEDDDDHDSDESSEGERPVRKRVNRIDSDDSDKEEEKETKETREEEEGEVL
GKGASPLDYSLVELHPPTNGQCPIKALEGLAHIGPQKPGATAVAIAPNGLELAPQDDDED
DLLGVTDLVDFVCNSDML
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcggcagcatcggagggttctacccccggtttatgcccaagctacgccgtg
atatgctcttttctagagcggtatggaaccttgcttgatttaccggagcttacatttcca
cagttggagcgatatcttcaagacacaatctcagttccaaagatcttggtggaccttcac
gtgaagttgttgaggaagattggcaagtcagtgtccgcagacagatgggagaagtacctt
gtgaaggtgtgccatgagttcaacagtacttgggcatgggagcttgaaaataaaggatac
agggacatgtctgtggagtacaagactggaatcctcaaacatttgtgtgaatgccagttt
gatgacaatgtaaagttcaagacagcaatcaatgaggaggatcctgatcagatgcggctt
ctccccattggcaaggacaaagatggcctgatgtactggttccaacttgaccaggacaag
aatgtgagggtctatgtggaggagcaggacgacctggacgggtcttcctggaagtgcatt
gtcagagacagaaacagcttggctgagatcctggcactgctaaagactcaaatcgaccca
gcactgttgacaaagaaagaaggagaggaggaagatgaggcgaaaaaatatactggggga
gaaggggaagttaaaaagacagaggatacctcagaggatgaagaggacaaaccctccaag
ggaacaacttctttagtctctccaaaaaccgagattacagaaaaagaggaatcacagcta
gacgaatcagatgccaaatcctcattgaatggcctcaaagatgagtcagagtcaaaaagc
caatcagaggagcctatggtggatgacaaggtcaacataaacacccgggccatcaaagaa
gagccaatggaggtgtcagaatccaaggagagcacagccacaaatgctacagagcctctt
gcagagaaaccctgtctgacatcacaaacagaacagacagatgaagccaagaggaagact
gcaaatgaactccaaagggccatgaagaatgaccagcaggccaaaatcccattgaaaaag
agagagatgaaactttgtgaaaatgttgataataatagtggcggtggcagtagtatcttt
gtgcgaaacccatctgttgctcctgtcaaagaaactcctgaagttgaggagacaagtaaa
gagatctctgatgccccggtggggacgatagagtgtataagtgatcaaatgaatggtgat
gctcagcctacaacagaaaaaagcgtcaataatggtttaagagactctgttgatggcaaa
aaacagcaaacaaaagctgctgctggggaagaacgtgaagctagtgcaaaagagaaaata
aacctggacaaggagaaagaggagatggcaagcaacactgaggtggccatggccaatgaa
acaagtctacagaaaatggttccagcagaaaaggaaagcactgaagattcagaggaagta
aaaaaatctgccttgaaagaggctaaatctccgtcccctctaatgacaaagccattgact
tcatctaaggatgcaacaagcccaccggagaagcactctgattgtaaagaggaacaaaat
gtcaaggtatccaagtgggatctaaaagtgtgtcgtacagaacacacgacctatacatca
atagaaaccgatgaaaaccctttgtctagtaagtcacagaaaccagatgaaactaaagga
acagattcatccattacctctcaagaggtcaagtcagctgtctctaaggaaattgacaaa
acagttgtcaataagggcggttatcccctttctgtcgtgaaagatatggaaaaaccaccc
tgcacaaaaggtacagaaaagtggtcaaaccctaaaaacccagaaacctcagtcattact
aaacaaaccgggagacctgacccaattacagagaaaccagactactctaaatgcataaag
atgccaacagtcgtaaaaaatacagagaaaccacccgacaaagagggtgtagagaaatgt
gatgtttctaaagatatcaaaacttctgtaattaaaaagacagagctttcagaaaagagt
aaagatgctgagaacctggccatctctcaagagaccaatacgtcctcattccttaaaaag
gcagacaaaccagtttccaataaagaagcagagaaactggagagcattaaagagactgat
aaatcgttggtcattaaaatgacagtgaaaccagaggcatctaaacatacagagaaatgt
gataaccctaaagacaataaaatgtcagctgtcaccaaggagaaacctgctgtaggcata
gatgcaaaggctgccgctgaggtgaataaaaaagctgtcctggaggaagatttctcagcg
tctatctgtaaagatgaaatgggaactgttgctaaagcaactaagacacaatctggacca
aaagacatggagatggcagacgtctctgagaaaacaacccaatcacaactgggtgaaccc
aaaaaggtagagaaatcggctacccctaaagatattgggaaatcggttacccctaaagat
gcagagaaatgtgctacccctaaagacacagagaaatctactaaattggttacccctaaa
gatgcagagaaatgtgctaccccaaaagacacagagaaatcagcaatgcctaaagataca
gtgaaatatgctaaatcggcagcacttaaagacgcagagaaattggctacccctaaagat
gcagagaagtctgctaaatcagctacacctacccctaaagatgcagagaagtctgctaaa
tcagctacacctacccctaaagatgcagagaagtctgctaaatcagctacacctacccct
aaagatgcagagaagtctgctaaatcagctacacctacccctaaagatgcagagaagtct
ggtaaatctgctacacctacccctaaagatgcagagaagtctggtaaatctgctacacct
acccctaaagatgcagagaagtctgctaaatccgctacacctacccctaaagatgcagag
aagtctgctaaatcagctacacctacccctaaagatgcagagaattctgctaaatcagct
acacctaccccaaaagtcgctgagaagtctgctaaatcagctacacctacccctaaagtc
gctgagaagtctgctaaatcagctacacctacccctaaagatgcagagaagtctgctaaa
tcagctacacctacccctaaagatgcagagaagtctgctaaatccgctacacctacccct
aaagatgcagagaagtctgctaaatccgctacacctacccctaaagatgcagagaagtct
gctaaatccgctacacctacccctaaagatgcagagaagtctgctaaatccgctacacct
acccctaaagatgcagagaagtctgctaaatcagctacacctacccctaaagatgcagag
aagtctgctaaatccgctacacctacccctaaagatgcagagaagtctgctaaatccgct
acacctacccctaaagatgcagagaagtctgctaaatccgctacacctacccctaaagat
gcagagaagtctgctaaatcagctacacctacccctaaagatgcagagaagtctgctaaa
tcagctacacctacccctaaagatgcagagaagtctgctaaatccgctatacctacccct
aaagatgcagagaagtctgctaaatctgctacacctacccctaaagatgcagagaagtct
gctaaatcagctacacctacccctaaagatgcagagaagtctgctaaatccgctacacct
acccctaaagatgcagagaagtctgctaaatccgctacacctacccctaaagatgcagag
aagtctgctaaatccgctacacctacccctaaagtcgctgagaaatcggctaaaaacaca
gagactacctctaaaaagattgttctatcttctaggggacagaaaccagacactgaagaa
actgagaaactggcagacacaaagccagttgcagaaaaaggagagaaacttgtcaccttt
caggacgccaagcaattaccctctctcaaaaagtctgtcccagtggaggtgaaacaggag
gagcctatggaaatgcgttcggaaaagtcaacacatgacaacataaagatcaagggacat
gctgaaaaaggctggccaaaaaaggctgttaaaagtggagtgaagtctgagaccaaccct
atcaaacacccaaagcccatgaactgtgatgcatcatcagaaaaacaggctattagtaag
aaggcatcatctctcactgagggtgagacggacaaaagccaggacaaagtaatcaaggaa
gatgccacaacacagggattccccccaaaagaggatgggagtaagcctgatcatcctaag
aaaaatgacaaaaaggaggatgatggaactgagaaagatgacaaaaattcaacggtagaa
gagaaattgggtcaggcaaaagcaagtgaggggtctgaggaagatgataacaaagaggat
gaggacaagggtgaaaaaaaggatgcgggaacaacatcagagatccaagaggagggaatt
cgcctgaaaatacgcgggattacccaccggaggagagctgagctccagagaaaggagagg
gactctgggtcagatactggtgagactgggagatccctgaggaggtcacccaggatctgc
aggccgaccgctaagggggtggagttccaggacaggaggatggagaagaaagaggccaca
ccccctgtagagaagggtgatgaggagaaaactgttcagaggaaaccgagagagaaggtt
gatcaagatggactgtacaaatctaaggggcgacggaggagaaagacccggtggtccaac
actcgaacacaaaggcgcaaaaataatgattctggtgaagacgacgaaagtgagtcgagc
gaagaggagagtgaggaggacaacagtgatgagagctttaaggtggagaggggcaagagg
aggaagaggaacagagagaggcacagcgacgattctgacacctcctcggatgatgacctc
cctcctaacgatgacccctgtaaacactgcggcttccccaaccatcctgagctgattttg
ctgtgtgactcgtgcgatagcggctaccacacggcctgcctcagaccccctctcatgatc
atcccagacggggagtggttctgcccaccctgccaacataagctgctctgtgacaagctt
gaggagcagcttactaatctcgacgcttccctgaaaaagagggagcgcgccgagcgacga
aaagagcggttggtctatgttggaatcagtgttgaaaacatcatcactccctcgttggag
gtagaggaagaaagggaggaagaggtggtgaagaaggagaagaaagagcgaaccaagagc
tggggtcgaaggtccacaagggcaaagaaaagcataagctacaggtttgatgaatttgat
gaggctattgaggaggcaattgaagaagacatcagagaggctgatggtggaggagctggt
cgaggcaaggacatggccaacatcacaggccatagcagagggaaggacatgtccactatc
ctggcagcaggagagggtggcgagggcaaggagaatgggtgcctaccgcggcccaacgcc
agccagcgcaggaagaagcgccggcgtctcaacgacctggacagcgacagcactatggag
gaggaagagagcgaggacgagttccgtctcagtgacagtacggaggaagaggagtttgtg
gcgtcggggaagagcgatgcagagagcgaagtggcagtcgactccaatgacgacagcgac
ttcggcagcacacaacgcagaaccgccaggacaaggaggccagccaaacgtcagaggagt
gctcagctgcgacggcgccgcacaccacgaaggtacgcggacgatgaagaggagacgagt
gaggaagaaatggtgtcagagggctccagcgagttcagcgatagcgacctggactgtagc
cgacgccgatcccgccggagtcagacgacgaagcaggtcaactactgcgagtcgtccgga
gactctgacggctccaaggccaacacaaaccgtgacaaagtcaaaccgtggcggcgcctc
gccagttcagacagcgaagcgagctcctccagaggctccgatgacagcgagagggagagg
actaggttaaagaggagggccgactcatccgaaaaagagtcccagcagcaccgcagacga
ctttcgctgaaacggcggcgagcctctgaggaggacgatgacgaccacgattccgatgaa
tcatcggagggagaacgtcctgtccgcaagcgtgtgaaccgcatcgactcggacgactct
gacaaggaggaggagaaggagacgaaagaaaccagggaagaggaggaaggggaagtgctg
gggaagggagccagcccgttggactacagcctggtggagctgcatccccccaccaacgga
cagtgtcccatcaaggccctagagggcctggctcacattgggccccaaaaacctggggcc
acagctgtcgccatagcgcccaatggactggagttggcaccacaggatgatgatgaggat
gacctgctgggagtcacagacctggtggactttgtctgcaacagtgatatgttgtaa
DBGET
integrated database retrieval system
