Oncorhynchus kisutch (coho salmon): 109873456
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Entry
109873456 CDS
T09179
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06784
roundabout, axon guidance receptor 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109873456
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
ROBO family
109873456
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_6
C2-set_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
109873456
NCBI-ProteinID:
XP_020320700
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All DBs
Position
LG28:complement(30118850..30157612)
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AA seq
1157 aa
AA seq
DB search
MQVGRWLLWVTWLYIWAEVSRQCQCQCTCIPEPGLAEGSKTPVKEHDRHRLEHRQHRPHR
DKPHRRKGSRLRTDVVEVRPRIVHHPSDVVVKVGSPATLSCRAEGTPEPSIEWLRNGQPL
EMDKLDSQSRPIVLSEGSLFFLSVVPGRRSQSHEGVYACMARNRAGKATSRNASLYIAAL
REDFRVQPCDVEVAVGEVAVMNCSPPVGHPEPNATWRKDGVLINNTNPHYTELNGKLIIA
PAQKNDSGVYICVASNTVGVRESRAARLSVLAKPVLVLKPQDVSVGTGESAQFYCEAKGD
PMPAVEWSRVQGPLPNGRYLVNPDQSLQIYYVTPQDSGRYTCTAVNDVGVVTASAQLVVE
GAASTRQRDLHRELSDLRIALENVTVLTPNSNMSQVQWKLQSFPTQPQYLDGFEVLCRSL
LPASSDWAAKRVPLPNFQTLVGPLKRGYKYDFKVRPYGSSLYGRESNTRHLRVPETVPSA
PPQAVSITRSPDHNDTVYVTWEPPPHKAHNGIIQGYQLWCVQLEEQQYLNWTVDSGTHSL
EINPLYPDKEYWVQVAAVNGAGVGVQSDPHRLVIDSRRSGAPQSDSPSRDLTLVLAVLRN
PVFIGSIGALLCCILMVMAFCLYRRHTRPGNHLGRGHGKAKGLYRLASEDLIIKHRMAAP
DSPWISGAWSPAQSGEKYQGMWAQSQENPGFRKTTKKDPGSLDSAVPIVPDSCGVYGTFY
VDLTGNGLKTFNSPTRCPKRPHCHTTSSSHSSQRGTEAVRTAVKTMLVKDGQALPPAQPK
MGVLKESWEKNYKRELHAENSAPLVSSRSQALAVRGVPYKQRLSHLPSGGRSECVKPLAS
SRFLHHSASLHLVDMLPTPPPLPMEDTTDTHSLTSEEGSSRSTKLMVDDGSHQSVCAASG
LRGPPSNTTGFPSYSRLSTASYCLSLDEEQDTTMTSQEVTQYLELSPKAERRSTMPDNPP
SSSLSRPFSPTPTLGYICGLLPSDQLEDRLTDDQESQSMGSRRARLQSTPLSLCSEWEGS
LWNGWGSVSEGNMANSARTSFISSSDGSFINDANFAGVLATVAAESMSGASFSDFSPPAS
PLSALFPPAPDEGAECFGELDPMPVWDWSTTWVEEMEAQYRAQYTSQADAPPACNTWGHC
RADRHCEDRQATGGGRV
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttggcaggtggctgctctgggtgacctggctctatatctgggcggaagtgtca
cgccagtgtcaatgccaatgcacatgtatacctgagccgggactggccgaggggtcaaag
acaccggtcaaggagcatgaccgtcatcgattggaacaccggcagcatcggccacacagg
gacaagccacaccggagaaaaggttccagactgaggacggatgtggtggaggtgcgcccg
cggattgtccaccacccctcagatgtagtggtcaaggtaggcagccccgccaccctctcc
tgccgcgccgaaggcacacccgagccctctattgagtggctccgcaatggccagcccctg
gagatggacaagctggacagccaatcgcggcctatcgtcctatcggagggcagccttttt
ttcctcagcgtggtgccagggaggcggagtcagtcacatgagggcgtgtacgcctgcatg
gcaaggaaccgcgctggcaaggctaccagccgcaacgcctccctctatatcgcagccctg
cgtgaggacttccgggtgcagccctgtgacgtggaggtggctgtgggggaggtggcggtg
atgaactgcagcccgccggtaggccaccccgagcccaatgccacctggagaaaagacggg
gtcctcatcaacaacaccaatccgcactacactgaactgaatgggaagttgataattgcc
ccagcccagaaaaatgactctggcgtgtacatctgtgtggcctccaacactgtgggagta
agagagagcagggccgcacgcctgtctgtcctagccaagccagtgttggtgctgaagcct
caggatgtgtcggtggggacaggagagtctgcccagttctactgcgaggctaaaggagac
cccatgccagctgtggagtggagccgagtgcagggccctctgcccaacggcaggtatcta
gtgaatcctgaccagagcctccagatctactacgtgacaccacaggattctgggaggtac
acctgcacagctgtcaacgacgtgggggtggtcaccgccagcgcacagcttgtggtggag
ggagctgcaagcaccagacagagggaccttcacagagagttgtcggacctgcgcatagct
ctggagaatgtgacggtgctgactccaaactccaacatgtcccaagtgcagtggaagctc
cagtctttcccaacccagcctcaatacctggatggtttcgaggtcctctgtcgctctctc
ttgcccgccagttcggactgggctgctaagagagtgccactacccaactttcaaacactg
gtcggcccgctcaagaggggctacaagtatgacttcaaagtgcgtccctacggcagcagc
ttgtatggccgggagagcaacaccaggcacctgcgtgtacctgaaacagtgcctagcgcc
ccacctcaggccgtctccataacaaggtcccctgaccacaatgacacggtctatgtgacc
tgggagcctccaccccacaaagctcacaacggcatcatccagggataccagttgtggtgt
gtgcagttggaggagcagcagtacttgaactggacagtggacagtgggacccacagtctg
gaaataaaccctctgtacccagacaaagagtactgggtccaggtggcagcagtcaacgga
gctggcgtcggggtgcagagtgacccccatagactggtcatcgactcccggaggtccggg
gccccccagtcagacagccccagtagggacctgactctggtcctggctgtgctgaggaac
cctgtgttcatcggaagcattggtgccctcctgtgttgcatcctaatggtgatggccttc
tgcctgtaccgccgccacacacgacccggcaaccacctgggacgaggccacggcaaggct
aaaggtttgtacaggttggccagtgaggacctaatcatcaaacaccgaatggcggcccca
gactcaccatggatctcgggtgcgtggagtccggcccagagtggcgagaagtaccagggc
atgtgggctcagagccaggagaaccccggcttcaggaagaccaccaagaaggaccctggc
tccctggactctgctgtccccatcgtgcccgacagctgcggtgtctatgggacgttctac
gtggacctgacgggaaacggcctcaagaccttcaacagccccacccgatgccccaagagg
ccccactgccacaccacctcctcctcacactcctcccagcgcggcacagaggcggtgcgt
accgctgtcaagaccatgctggtcaaggatggacaggccctgcccccagcccagcccaag
atgggcgtgctcaaggagtcatgggagaagaattacaaacgagagctccatgcagagaac
agcgcccccttggtgtcatcgaggagccaggcactggctgtgaggggagtgccttacaaa
cagaggctcagccatctcccatcaggtgggcgctccgagtgcgtcaagcccctggcttcg
tcccgcttcctgcaccactcagcctcactgcacttggtggacatgctccccaccccaccc
ccactgcccatggaggacaccactgacacacacagcctcacctcagaggaagggtccagt
aggtccactaaactgatggtggatgacgggtctcaccagtctgtgtgtgctgcgtccggt
ctccgtggccccccatccaacactacgggcttcccctcctacagccgcctgtccactgcc
tcttactgcctgtcattagacgaggagcaggacacgacaatgacctcacaggaagtcacc
cagtacctggagctcagccccaaggccgagaggcgcagcacaatgccggataatcctcct
tcctcctccctgtcccgccctttctcccccactcccactttgggctacatctgtgggctc
ctcccctccgaccaactggaggacaggttgactgacgaccaggagtcccagtcaatgggc
tctcgacgggcccggctccagagcacacccttgtcgctctgcagtgaatgggagggctcg
ctgtggaacggctgggggtcggtgtcagagggcaacatggctaacagtgcccgcaccagc
ttcatcagctcgtcggacggctcattcataaacgatgccaactttgccggcgtgctggcc
actgtggccgcagagtccatgagtggagcctctttctcagacttctctcccccggcgtcg
cccctcagtgccctgttccctccggctccagatgaaggagcggagtgtttcggggagctg
gatcccatgcctgtttgggactggagtacaacctgggtggaggagatggaggcgcagtac
cgcgcccagtacacctcccaggcagatgcaccccccgcctgcaacacctgggggcattgt
cgtgctgaccgtcactgtgaggaccgccaagccaccggagggggtagggtttga
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