Oncorhynchus kisutch (coho salmon): 109873518
Help
Entry
109873518 CDS
T09179
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X4
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04210
Apoptosis
oki04517
IgSF CAM signaling
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109873518
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109873518
09142 Cell motility
04820 Cytoskeleton in muscle cells
109873518
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109873518
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109873518
Intermediate filaments
Intermediate filament-binding proteins
109873518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
EF-hand_FSTL1
Motif
Other DBs
NCBI-GeneID:
109873518
NCBI-ProteinID:
XP_020320765
Ensembl:
ENSOKIG00005032298
LinkDB
All DBs
Position
LG29:complement(2825624..2879162)
Genome browser
AA seq
2490 aa
AA seq
DB search
MATIEIQDLGQQRETSRLPRETLATTSPQRMDTSGVKVLESADDIQERRQQVLDRYRRFK
ELSGVRRQKLEDSYRFQFFRRDADELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEA
EVQANAGAIIKLDETGNLMTSEGHFASETIRTRLEELHRLWDLLLQKTKEKGVRLLQAQK
LVQYLRECEDALDWISDKEAMATSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQ
LAGKLSQESHPEAELIVRKQEEVNAAWQRLKGLAQQRQGRLFGAAEVQRFNRDVDETISW
IKEKEQLMASDDFGRDLASVQALLRKHEGLERDLAALEDKVNTLGGEAERLQQTHPQNAS
QIHLKRDELITNWEQIRTLAAERHAHLNDSYRLQRYTADFRDLTSWVTEMKALINADELA
NDVAGAEALLDRHQEHKGEIDAHEDSFKATDEAGQALLNTGHYALEEVKEKLGVLTEEKE
SLLELWEVRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHE
DFEKSLSAQEEKITALDEFATKLIQNNHYAKEDVATRRDALLSRRNALHERAQSRRAALE
DSFHLQQFFRDSDELKSWINEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDA
LQKSGQELLDGKHYAADEVSVRMDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDI
ELWLYEVEGHLASDDYGKDLTSVQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHF
DGDNIKRKQEALVARYDALRDPMAARKQKLSDSLRLQQLFRDVEDEETWVREKEPIAAST
NRGKDLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGEAMVEEGHFAGEEVKVKLGELNG
RWDTLKGKAGQRRQDLEDSLQAQQYFADANEAESWMREKEPIVGSPDYGKDEDSAEALLK
KHEALMSDLSAYGTSIQALKEQAQSCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKK
GDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPTQSSSRENLLDEQGSIGLRQDQIE
NQYGTLLELGEKRKDMLEKSCKKFMLFREANELQQWINEKEGALTNEEVGSDLEQVEVLQ
KKFDDFQKDLKANESRLRDINKVASELESEGLMAEEANMVQAQEQVMVGSVPGKDDTDSK
NASPWKNVRLAVQTTANFNTIKELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKE
WIEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVKSLGETAERLIQSHPEAV
DDIQEKCTELNTAWSSLVARADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRSLVSSEEL
AKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDHER
ADLEKAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKH
EDFDKAINVQEEKIAALQSFADQLVGADHYAKPEISKRRNEVLDRWRRLKAQMIEKRSKL
GESQTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHAN
ADRIRGVIDTGNALIQRGACAGSEDAVQSRLGALDEQWQFLVNKSAEKSQKLKEANKQQN
FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQAD
SLTASTAFDPTQVKDKRNAVNGRFAKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKE
KKLLVSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSVQDTGKKLSDDNTIGQEEIE
QRLGQFEEHWTELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTL
AAVQGLLKKHEAFETDFTVHRDRVNDVCSNGDELINKNNHHVDSISAKMTSLRGKVSELE
RAAAMRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFD
AGLQAFQQEGITNITALKDQLLAAKHVQSKAIEARHAALMKRWNKLLDNSQARKKKLLEA
QDHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHEAFRSSLSS
AQADFNQLAELDRQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEE
NDKLRQEFAQHANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQL
KKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTE
DALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILDTVDPNR
DGNVSLQEYMAFMISRETENVKSSEEIESAFRALSVDAKPYVTKEELYQNLSKEQADYCI
SHMKPYLDSKGREMPSAFDFVEFTRSLFVN
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atggccaccattgaaatccaagacctagggcaacagcgggagacaagccgtctgcctagg
gagactttggccaccacctctcctcagagaatggataccagtggggtgaaagtgctggag
tctgccgacgacatccaggagcgccggcagcaggtgttggatcgctaccggcgcttcaag
gagctgtcgggtgtgcgccggcagaagctggaggactcctaccgtttccagttcttccgc
cgcgatgccgatgagctggagaagtggatccaggagaagctgcagatcgcctccgatgag
aactacaaggaccccaccaacctccagggcaagctccagaaacaccaggccttcgaggcg
gaggtgcaggccaacgctggagccatcatcaagcttgatgagactggcaacctcatgacc
tccgagggtcactttgcctctgaaaccatccgcactcgtctggaggagctgcaccgtctt
tgggacctgctgctgcagaagaccaaggagaaaggtgttcgtctgctgcaggcccagaag
ctggtgcagtacctgcgcgagtgtgaggatgccctggactggattagtgacaaggaggcc
atggccacctcagaggagctgggccaggacttggagcatgtggaggtgctccagaagaag
tttgaggagttccagacggacctggcggctcacgaggagcgtgtgaacgaggtgaaccag
ctggcgggcaagctgagccaggagtcccaccccgaggcggagctcatcgtccgcaagcag
gaggaggtgaacgccgcctggcagaggctcaagggcctggcgcagcagaggcagggcagg
ctgttcggagctgccgaggtgcagcgcttcaacagggatgtggacgagaccatcagctgg
atcaaggagaaggagcaactcatggcgtccgatgactttggccgggacctggccagcgtt
caggccctgctgcgcaagcacgagggcctggagagagacctggctgccctggaggacaag
gtcaacactctgggcggagaggctgaacgtctgcagcagacccacccccagaacgcttcc
cagatccacctgaagagggacgagctcatcaccaactgggagcagatccgcacgctggcc
gccgagcgccacgcccacctcaacgactcctacaggctgcagcgctacactgcagacttc
cgtgacctgaccagctgggtgacggagatgaaggccctgatcaacgctgacgagttggcc
aacgacgtggccggagccgaggctcttctcgaccgccaccaggagcacaaaggtgagatt
gatgcccatgaggacagcttcaaagccacggacgaagccggtcaggccttgctcaacacc
ggacactacgccttagaggaggtcaaggagaagctgggtgtcctgactgaagagaaggag
tctctgctggagctgtgggaggtgcgcaggcagcagtatgagcagtgcatggacctgcag
ctcttctacagggacacagagcaggtcgacaactggatgagcaaacaagaggctttcctt
ctgaacgaggaccttggtgactctctggacagcgtggaggccttgcttaagaaacacgag
gactttgagaagtccctcagcgcccaggaggagaagatcactgccctggatgaatttgcc
accaaactgatccagaacaaccactatgccaaggaggatgttgctactcgtagagatgct
ctgctgagccgccgcaacgccctgcacgagcgtgctcagtcccgccgcgccgctctggag
gactccttccacctgcagcagttcttccgtgactcggacgaactcaagagctggatcaat
gagaagatgaagacggccaccgacgaagcctacaaggacccgtccaacctacagggcaag
gtccagaagcaccaggccttcgaggcggagctgtcagccaaccagagccgcatcgatgct
ctgcagaagtctgggcaggagctcctagatgggaagcactacgccgccgacgaggtgtct
gtacgcatggacgaggtcagctcccagtggaagaagctgctggaggccaccgaactcaaa
ggcatcaagctgcgcgaggccaaccagcagcagcagttcaacagaaacgtggaggacatt
gagctgtggctgtatgaggtcgagggccacctggcttcagatgactacggcaaagatctg
accagcgtccagaacctgcagaagaagcacgccctgctggaggctgacgtggctgcccac
caggaccgcatcgatggcatcaccattcaggcgcgtcagttccaggaagccggtcacttt
gacggcgacaacatcaagcgcaagcaggaggcgctggtggcgcgctacgatgccctccgc
gaccccatggccgcccgcaagcagaagctgtcagactccctgcggctgcagcagctcttc
agggacgtggaggacgaggaaacctgggtccgggagaaggagcccatcgccgcctccacc
aaccggggaaaagacctgatcggcgtccagaacttgctgaagaagcaccaggccctgcag
gcggagatcgccggccatgagccccgcatcaaggccgtcacccagaaaggagaggctatg
gtggaggaaggccactttgctggggaggaggttaaggtgaagctgggggagctgaacggc
cgctgggacaccctgaaaggcaaggccgggcagcgcaggcaggacctggaggactcactg
caggcacagcagtactttgccgacgccaacgaggcagagtcgtggatgagggagaaagag
cccatcgtgggcagtcccgactacggcaaggatgaggattcggctgaggccctgctgaag
aagcacgaagccctgatgtctgacctgagtgcttatggcaccagcatccaggctttgaag
gagcaggcccaatcctgcaggcaacaagttgcgcccaccgatgatgagactggcaaggag
ctggtgctggccctctatgactaccaggagaagagcccccgtgaggtcaccatgaagaag
ggagacatcctcaccctgctcaacagtaccaacaaggactggtggaaggtggaggtgaac
gaccgccagggctttgtgccagcggcctacgtcaagaagctagaccccacccagtcctct
tcccgggagaacctgctggacgagcagggcagcatcggcctccgccaggaccagatcgag
aaccagtacggcactctcctggagctgggcgagaaacgcaaggacatgctagaaaagagc
tgcaagaagttcatgctgttccgcgaggctaacgaactgcagcagtggatcaacgagaag
gagggagccctcaccaacgaggaggtgggctccgacctggagcaggtggaggtgctgcag
aagaagtttgacgacttccagaaggacctgaaggccaacgagtctcgtctgagggacatc
aacaaggtggcatctgagctggagtctgagggcctaatggcagaggaggcaaacatggtc
caagctcaggaacaagtaatggtgggttccgttcctggcaaggatgataccgattccaaa
aatgcttcaccatggaagaatgtacgcttggctgttcaaacgacggctaactttaatact
atcaaggagctgaacaaccgctggaggtccctgcagcagctggctgaggagaggagcaac
atgctggggagtgcccatgaggtgcagaggttccacagggatgcggatgagaccaaggag
tggatcgaggagaagaaccaggccctgaacaccgacaactacggccacgacctggctagc
gttcaggctctgcagcgcaaacatgagggctttgagagagacctggccgccttgggagac
aaggtgaagtctctgggggagacggcggagcgtctgatccagtcccacccagaggctgtg
gacgacatccaggagaagtgcacagagctcaacacggcctggagcagcctagtggcgcgt
gccgaccagcgcaaggacaagctgggcaactcccacgacctgcagcgcttcctctccgac
ttcagggacctgatgtcctggattaacgggatccgaagcttggtctcctcagaggaactg
gccaaagatgtgaccggggctgaggcccttctggagagacaccaggagcaccgtactgag
atcgacgcccgtgcgggcaccttccaggcctttgagcagtttggccagcagctgttggca
cgcggccactacgccagtccggagatccagcagaagctggaggccctggaccacgagagg
gccgacctggagaaggcctgggtccagagacgcatgatgctcgaccagtgcctggagctc
cagctgttcaaccgtgactgtgagcaggctgagaactggatggcagcgcgcgaggccttc
ctggccagcgacgacaagggcgactccctggacagcgtggaggccctcatcaagaaacac
gaggactttgacaaggccatcaatgttcaggaggagaagatcgctgccctgcagtccttt
gctgaccagctggtcggcgctgaccactacgccaagcctgagatctccaaacgtcgcaac
gaagtcctggacaggtggcgccgtctgaaggcccagatgattgagaagcgttccaagctg
ggcgagtcccagaccctgcagcagttcagccgtgatgtggatgagattgaggcctggatc
agcgagaagctgcagacggccaccgacgagtcctacaaggaccccaccaacatccagttg
tccaagctgctgagtaagcaccagaagcaccaggccttcgaggcagagctgcacgccaac
gcagaccgcatccgtggggtcatcgacacaggaaacgccctcatccagagaggggcctgc
gccggcagtgaggacgcagttcagtcgcgtctcggtgccctggatgagcagtggcagttc
ctggtgaacaagtcagcagagaagagccagaagctcaaggaagccaacaagcagcagaac
ttcaacactggcatcaaggactttgacttctggctatctgaggtcgaggcccttcttgcc
tctgaggactatggcaaagacctggcctccgtcaacaacctgctgaagaaacaccagctt
ctggaagccgacatctctgctcatgaggatcgcctgaaggacctgaacggccaggctgac
agcctgacggccagcacagccttcgaccccacccaggtcaaggacaagcgcaacgccgtc
aatggacgcttcgccaagatcaagagcatggctgccggacgccgcgccaagctcaacgag
tctcaccgcctgcaccagttcttcagggacctggacgatgaggagtcttggataaaagaa
aagaaattgcttgtgagttcagaagactatggacgtgatttgacaggagtgcagaatcta
aggaagaaacacaagaggctggaggctgagctgggggcccacgagccagccatccagtct
gtgcaggacactgggaagaagctgtctgatgacaacaccatcggccaggaggagattgag
cagaggctgggccagtttgaggagcactggacggagctgaaggacctggctgcagcaagg
ggacagaggctggaggagtcgctggaataccagcagtttgttgcgaatgttgaagaggag
gaagcctggatcaacgagaagctgaatctggtgggaagcgaagactacggggataccctg
gccgccgtgcagggcctgttgaagaagcatgaggcgtttgagactgacttcaccgtgcac
agggacagagtgaatgatgtgtgttccaacggagacgagctcatcaacaagaacaaccac
cacgtggacagcatctcagccaagatgacgtccctgcggggcaaggtgtctgagctggag
agggccgctgccatgaggaaagccaagctggacgagaactctgccttcctgcagttcaac
tggaaggccgacgtggtggagtcctggatcggtgagaaggagaacagcctgaagactgat
gactacggacgagatctctcctctgtgcagacgttgctcactaagcaggagacgtttgac
gctggtcttcaggccttccagcaggagggcataaccaacatcacggccctcaaggaccag
ctgctggcggccaagcacgtccagtccaaggccattgaggcccgccacgccgccctcatg
aagcgctggaacaagctgctagacaactcacaggctcgcaagaagaagctgctggaggcc
caggatcacttcaggaaggtggaagacctgttcctgacctttgccaagaaggcatcggcc
ttcaatagctggtttgagaatgcagaggaggacctgacggacccggtgcgctgcaactcg
ctggaggagatccgggctctgcgcgatgcccacgaggccttccgctcgtcgctgagctcg
gcgcaggccgacttcaaccagctagctgagctggaccggcagattaagagttaccaggtg
gtgtccaacccctacacctggttcaccatggaggccctggaggagacctggagaaacctg
cagaagatcatcaaggaacgagagctagagttgcagaaggagcagagaaggcaggaggaa
aacgacaagctgcggcaggagtttgctcagcatgccaacgcattccaccagtggctgcag
gagaccaggacatatcttctggatgggtcctgtatggtagaagagtccggaaccttggaa
tcacagcttgaggcaaccaagcgtaagcaccaggagatccgggccatgcgcagccagctg
aagaagatagaggacttgggagcggccatggaggaagccctgatcctggacaacaagtac
acagaacacagcacggtgggcctggcccagcagtgggaccagctagaccaactaggaatg
aggatgcagcacaacctggagcagcagatccaggccaggaacaccactggagtgacagag
gatgccctgaaggagttcagcatgatgttcaagcattttgacaaagagaagtctggccgt
ttaaaccatcaggagttcaagtcgtgtctgcgctcgctgggttacgacctgccaatggtg
gaggagggagaaccagaccccgagtttgagtccatcctcgacacggtcgatcccaacagg
gatggcaacgtgtccttgcaggagtacatggctttcatgatcagccgcgaaacagagaac
gtaaagtccagcgaggaaattgagagcgccttccgagccctcagcgtcgatgccaagccc
tacgtcaccaaggaggagctctaccagaacctgagcaaggaacaggcagactactgcatc
tcgcacatgaagccctacctagacagcaagggccgggaaatgccatctgccttcgacttt
gttgaattcacccgctcgcttttcgtcaactga
DBGET
integrated database retrieval system
