Oncorhynchus kisutch (coho salmon): 109873574
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Entry
109873574 CDS
T09179
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109873574
04020 Calcium signaling pathway
109873574
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109873574
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109873574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
109873574
NCBI-ProteinID:
XP_031665301
Ensembl:
ENSOKIG00005047629
LinkDB
All DBs
Position
LG29:14899520..15132027
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AA seq
2248 aa
AA seq
DB search
MSERLDDTEPYFIGIFCFEGGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATVGSD
FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIGVEFY
MGKFHSTCFTVDTGERAAAFPCGTEAPSRMCPNGTECTEYWIGPNYGITNFDNILFAVLT
VFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERV
EKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDENAEEKSPLDVLKRGKVKKSKN
ELIGAEEGDDHFTDMSSVVPPGSPFGRASVKSMKLDSSSYFRRKERRMRFFIRRMVKAQS
FYWTVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSEMSLKMYGLGARNYFH
SSFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKFTKYWNSLRNLVVSLL
NSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDTFPAAILTVFQILTGE
DWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEE
KQEEEANKKLALQKAMEVKEVSPVSAANISIAVFVKQNRDVLSRSSSVSSVHSPKEQQRA
NKIMSVWEQRTNQLRQNNLRASSEALFNELDPEERLRVSSALHLRPDMKTHNDRPLVVEP
GNGDKPRPPKEDRDGADPQQEGGDPYGPQLRKHHRHRERNGENGESRHHTHHSRSRDHYH
PDGPRPKEGKVERSHSREGGQGHRHHHQAGSPEEGVNGGGEEREHRHHHSHRQPREGNGA
LANGARVERKGRGHKEGNGEGNGERRRYRSRMVRAQSTLDGEECRENGKRDGDWDQGHRA
SLDAQGESLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNSNTVHIPVTITAPPRE
TTIIPMNNIDRESLPLNEEKKNLEEDEEELKNGPKHILPYSSMFVFGQTNPVRRLCHYVV
NLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGL
LLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIKRLPK
LKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKSLEKDCRGKFL
DYDRDDVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDQGPSPG
FRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKNERACIDFAINAK
PLTRYMPADKQSFQYKMWKFVVSPPFEYSIMTMIALNTVVLMMKFHGAPELYEAMLKYLN
IVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEIKTDKLINLSFLR
LFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNE
ESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGSGGKECGSDFAYF
YFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWAEYDPAACGRMTY
LDMHEMLRHMSPPLGVGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTLMALIRTALEIKL
ASGVLAQRLCDADLRKEISRVWPNLPQKTVDLLVTPYKIDEFNELICPFAVVNRELTVGK
VYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNKKGAAFFRPMMPMTHMQEETPITTAKP
PPPSQPEPEPQPEPPPVTTSLTNGDTVPSPRSAIKESISGDQLSQEGQRSSTNSRTVQRG
QSEDVPYSIKPQEPVEMRQVENGADLEGYFGLEGHGRAASMPRLDSQYYPIPDISPIRRS
ASTLASQRPQEVSLRDHTLERPSQAQAQSSSAPGQAQDRPYHHHHHHRCHRRRDKDRDKK
QKSLDRASSVQPSSIAGLPADPAVEGLSMERARERDRGRPQERRHHSAAGEKQRYYSCER
YGGREHYHTKSAGPSRSTSPGETHDLGLFKQSIGMAKGSQVVLTSAFSTPCRGRRQLPQT
PLTPRPAVAYKTANSSPVQFGATGHKSSLSRGLSEHSTLLESPAMPVTRIGSDPNLSPQS
RGAPRHSLPEEPDDFQDAVSTHGGGGGRSPRTSASASHGATEPSSAPAPQGRAGVPNGYH
FTLGVNAGSSSSTRGTGSFREKEEDDWC
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgcctggatgacacagagccctactttattggaatattctgtttcgagggc
ggcattaagatcatcgccttgggctttgcattccacaaaggctcgtacctccgcaacggc
tggaacgtaatggactttgtggtcgtcctcactgggatccttgctacggtgggctcagac
tttgacctgaggactctgcgggcagtgagagtactcagacctctcaaactggtgtctggc
atccccagtcttcaggtggtattgaagtctatcatgaaggccatggtgcctctgctccag
ataggcatgctgctcttcttcgccatactcatgtttgccatcatcggagtggagttctac
atgggcaagttccactccacttgcttcactgtcgacactggtgagcgtgcggcagcgttc
ccctgtggcacggaggccccatccaggatgtgtcctaacggtacagagtgtacagagtac
tggatcggccccaactacggcatcaccaactttgacaacatcctgttcgccgtgctcact
gtcttccagtgcatcaccatggagggatgggtggacatcctctacaacgccaatgatgcc
tcggggaacacctggaactggctctacttcatccccctcatcatcatcggatccttcttc
atgctcaacctggtcctgggtgtcttatcaggggagtttgccaaagagagagagcgtgtg
gagaagaggcaggactttctgaagctgaggagacagcagcagatagagagagagctgacg
gggtacctggagtggatatgcaaggcagaggaggtgctgctggcggaggaggatgagaac
gcggaggagaagtcccctctggacgtgttgaagcgaggcaaggtcaagaagagtaagaat
gagctgatcggtgctgaggagggagacgatcacttcactgacatgtcctctgttgttccc
ccgggctcaccgtttggccgggccagcgtgaagagcatgaagctggacagttcatcctac
ttccgtcgcaaggagaggaggatgcgtttcttcatccgtcgcatggtcaaagcccagagc
ttctactggacagtcctttgcctggtggggctcaacacactgtgtgtggccatcgtccac
tatgaccaacccgagtggctcaccactgccctgtacctggcagagtttgtgttcctgggt
ctgtttctgtctgagatgagcctgaagatgtacggcctgggagccaggaactacttccat
tcctctttcaactgcttcgactttggtgtgataatagggagtatacttgaggtggtgtgg
tcgatgatcaaaccaggggcatcctatggcattagtgtactgagggctcttcgtctgctc
aggttgttcaagtttaccaagtactggaactccctgaggaacctggtggtgtctctgctc
aactccatgaagtccattatcagcttgctcttcctcctcttcctcttcattgtggtcttt
gctctgctgggcatgcaactttttggaggacagtttaatttcgaagaggagacgccgacg
accaacttcgataccttcccggcggccattctcaccgtcttccagattctgactggcgag
gattggaatgcagtaatgtatcatggcattgagtctcaggggggcgtgcggcggggaatg
ttctcctcggtctacttcatcgtcctcacactctttggaaactacactctcctgaacgtc
ttcttggctatcgccgtcgacaacctcgccaatgcacaggagctcaccaaggatgaggag
aagcaggaggaagaagccaataagaagctggccctgcagaaggccatggaggtgaaggag
gtcagccccgtgtcagcagctaacatctccatcgctgtttttgtaaagcaaaatcgagat
gtactctctcgcagctcgtccgtctccagcgtacattcacctaaggagcagcagagagcc
aataagattatgtcagtgtgggagcagcgcaccaaccagctgcgtcaaaacaacttgagg
gccagctcagaggctctgttcaatgagctggacccagaggaacgcctgcgtgtctcctcc
gccctccacctgcgccccgatatgaagacccacaacgaccgccccctagtggtggagcca
ggcaatggggacaaaccacgaccccccaaggaggacagagatggagcagacccccagcaa
gagggaggagacccctacggcccacaactccgcaagcaccaccgtcaccgggagaggaat
ggggagaacggggagagcaggcatcacacccaccacagccgcagtagggaccactaccac
ccagacgggccccggcccaaagaaggaaaggtggagaggagccatagtcgagaggggggc
cagggccacaggcaccatcaccaggctggatccccggaagaaggggtgaacggagggggg
gaggagagggagcaccgccaccaccactcccacagacagccccgagagggaaacggggcc
ctggctaacggggccagagtggagaggaagggccggggtcacaaggaggggaacggagag
gggaacggagagaggaggagataccgctcccgcatggtcagggcccagtcaactctggat
ggagaggagtgcagagagaatggaaagagagatggagactgggaccagggacacagagct
tcactggacgctcaaggggagagcctggccaccagccctgtgcagcctcctgcaggtctg
caggccggagagaagcaagaggatgcagacaaccagaagaacagccacagagccagccag
gcaggcctcaacagcaacactgtccacatccctgtcaccatcactgccccgcccagagag
actaccatcatacccatgaataacatagaccgtgagagcctccccctgaacgaggagaag
aagaacttagaggaggatgaggaggagctgaagaacggccccaaacacattctaccctac
agctccatgtttgtgttcgggcagaccaacccggtgcgtcggctgtgccactacgtggtg
aacctgcgttactttgagatgtgtatcctgtcggtcatcaccatgagcagcatagccctg
gctgctgaagaccctgtgcaggccaatgcaccacgcaataacgtgctcaaatacctggac
tacgtcttcacgggagtgttcacctttgaaatggtgattaagatgatagacctgggacta
ctcctccatcctggttcttacttccgcgacctgtggaacatcctggactttatcgtggtc
agtggagctctggtggcgttcgcctgctcaggaactaaaggcaaggacatcaacaccatc
aagtcactcagggtgctgcgagtcctgaggcccctgaagaccattaaacgactgcccaag
ctcaaggctgtgtttgactgcgtggtcaactctctgaagaacgtgctcaacatcctcatt
gtctacatgctcttcatgttcatcttcgctgtgatcgctgtgcagttgttcaagggcaag
ttcttctactgcaccgatgagtctaaaagtctggagaaggactgcaggggtaagtttctg
gactatgaccgtgatgacgtggctgcccaggatcgtgagtggagaaagtacgagttccat
tatgataacgtgctgtgggccttcctcaccctcttcaccgtctccactggggagggctgg
ccaatggtcctaaagcattctgtggatgccacctatgaggaccagggccccagcccaggc
ttccgtatggagacctctatcttctatgtggtctactttgtggtctttcccttcttcttc
gtcaacatctttgtggctctcatcatcatcaccttccaggaacagggagacaaggcaatg
tcagagtgtagtctggagaagaacgagagagcttgtatcgactttgccatcaatgccaag
cctctgacgcgctacatgccagctgacaagcagtcgtttcagtataagatgtggaagttt
gtggtgtcgccgccctttgagtactccatcatgaccatgatcgcactcaacactgtggtg
ctgatgatgaagtttcacggtgctccggagctgtacgaggccatgctgaagtacctgaac
atcgtgttcacagctctcttcacactggagtgcatcctgaagatcatcgcttttggacca
ctgaattacctgaaggcagcctggaacgtgtttgactttgtgacagttttgggaagtatc
acggacatcttggtcacagagattaagacggacaagctgatcaacctgagtttcctgagg
cttttcagggcggccaggctcatcaagctattgaggcagggctataccatccgcatcctg
ctgtggacctttgtccagtccttcaaggctctaccttacgtctgcctcctcatcgctatg
ctcttcttcatctatgccatcatcggcatgcaggtgtttggaaacattgagctgaatgag
gaatcggccatcaaccaccacaacaacttccagacattctttcaggctctgatgcttctg
ttcaggagtgcaacaggcgaggcgtggcatgagatcatgctgtcgtgtctgagtaaccgt
ccgtgtgataaactgtcagggtctggagggaaggaatgcggcagtgattttgcttacttc
tactttgtctccttcatcttcctctgctccttcctgatgctcaacctttttgtggcggtc
atcatggacaactttgagtacctaaccagagatgcctccatcctggggcctcaccacctg
gacgaatttatccgcgtctgggccgagtacgaccctgctgcctgtggccgtatgacctac
cttgatatgcacgagatgctccgccacatgtcccctcctctaggtgtgggaaagaaatgc
ccgcccagaatcgcctataagcgattggtcaaaatgaacatgcccatcgccgatgacaat
acggtgcacttcacgtccacgctgatggctctcatccgcactgctctggagatcaaactg
gcatctggggtgctggctcagcgcctgtgtgatgctgatctgaggaaggagatctccaga
gtctggcctaacctgcctcagaagactgttgacctgctggtcacaccatataaaattgat
gagttcaatgagctcatatgcccctttgcggttgtaaaccgagagctgacagtggggaag
gtctatgctgccctcatgatctttgactactacaagcagaaccgggccaagaggctggaa
cagcaactgggactggacttcacagggacaattaagaataaaaagggtgcagccttcttc
cgccccatgatgcccatgacccatatgcaggaggagacgccaatcaccactgccaagccc
ccgcccccctcacaacctgaaccagagcctcagccagagcccccgcccgtcaccacctct
ctaaccaatggtgacacagtaccaagccctagaagtgccataaaagagtccatatcagga
gatcagctgtctcaggagggccagcggtccagcactaacagtcggactgtacagcggggc
cagtcagaggacgtgccctactccatcaaacctcaggaaccagtggagatgaggcaggtg
gagaacggtgctgatttagagggctactttggtctggagggccatggcagagcagcctcc
atgcctagactggactcccagtactatcctatccctgacatcagtcctatcaggcggtcg
gcatccacattggcttcccagcgcccccaggaggtgagtctgagggaccacaccctggag
aggcctagccaagcccaggcccagtcatcctcagccccaggccaggcccaagacaggccc
taccaccatcaccaccaccaccgctgtcacagacgcagggacaaggacagggacaagaag
cagaagtcactcgacagggcgtccagcgtgcagccttctagtatagcaggtttgcctgct
gatcctgccgtggagggcttgtccatggagcgggcgagggagcgtgaccgaggcaggcct
caggagaggaggcatcactctgctgccggggagaagcagcgctactactcctgtgagcgc
tacggaggcagggagcactaccacaccaagtcagccggaccgagccgctccacctcccct
ggagagacccatgacctaggcctcttcaagcagagtatcggcatggctaaaggcagccaa
gtggtcttaacttcagcgttcagcacgccctgccgtgggcgcagacagctcccccagacc
cccctcaccccccgccccgccgtggcctacaagaccgccaactcctcacctgtgcagttt
ggtgccacggggcacaagtccagtctcagccggggcctctcggagcatagcaccctgctg
gagtcacccgccatgcccgtcacccgcatcggctcagaccccaacctgagcccccagtcg
cggggtgcccctcgacacagcctccctgaggagcctgatgacttccaggacgctgtgagc
acccatggagggggaggtggacgctcccccaggacctctgcctcagcttcccatggggct
actgagccttcctctgcacctgccccacagggccgggctggggtcccaaacgggtaccac
ttcactctgggggtcaacgccggttcgagttccagcaccagaggaactgggagcttccgg
gagaaggaagaggatgactggtgttag
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integrated database retrieval system
