Oncorhynchus kisutch (coho salmon): 109873590
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Entry
109873590 CDS
T09179
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
109873590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109873590
03037 Cilium and associated proteins [BR:
oki03037
]
109873590
Transporters [BR:
oki02000
]
Other transporters
Pores ion channels [TC:
1
]
109873590
Cilium and associated proteins [BR:
oki03037
]
Other cilia and associated proteins
Stereociliary proteins
109873590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Strabismus
Motif
Other DBs
NCBI-GeneID:
109873590
NCBI-ProteinID:
XP_020320824
Ensembl:
ENSOKIG00005022649
LinkDB
All DBs
Position
LG29:18477938..18485805
Genome browser
AA seq
958 aa
AA seq
DB search
MPRKSDVGAKIEDVGIEIDGDVSDSEDDTSRRRGNRRPAAGRGGARGRGKKPADEDDEDE
EEEEAPRNRRGANKKKAAKSRDTDDESEDDTPKRRQGRAANKGAANKKKGGKAQDNDEDS
EEEKGNKRNKKGATGKKGKEEETKDKKGDAKGKGKGKEKEDEKDKKKKKKKESSSDTDSN
TDSEEESMSEGEMERLKEEVEEKKKVIAIMRNKPWRMKRRLVHLKECQEFVDKFEGALGK
GKGRKFYAYKIMMMKKWIKFQRDFDNFKTTCIPWERKIKEVESHFGSSVASYFIFLRWMY
GMNMVLFGLTFGLVVIPEVLMGLPYGSIPRKTVPRAEQPTAQDYSVLMDFNGYCKYSVLF
YGYYNNQRTIGLLKFRLPLSYLMVGVGTFGYSLMVVIRTMAKNADVGGGDGDDGEFTFAW
KMFTSWDYLIGNPETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANFMIICC
LGGSGYLIFFVVKRSQEFANRDDLSWYEKNELELIMSLLGLVCPPLFETIAELEEYHPRI
ALKWQLGRIFALFLGNLYTFLFALFDEVNNKLEEEVSIRNASIWAQKEYYANFTLYNNDT
DTTPPPMDPSDVIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRFLNYCWC
WDLEATYPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQCWAVMA
TNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGKAKMFDVIM
ETIDLDLPAFLGTLMGYAANPGLIIPAVLLMVLAIYYLNSVSEAYQHANAELKKKMQMAR
DEEKNRRNNTESTDQVMKDLEDLLPNRSLLPPAPPPETGADNKADQGGKSTKVRPGTAGK
DVNLQKDVSLSSPNPNARGAVTRPPGPRGPGPLPGNGQQGPGGGPGRGRGRGQPPPRR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagagtgatgtgggggcgaagattgaggatgttggaatcgagatcgatggg
gacgtgagtgacagtgaggatgacaccagtcgaaggagagggaacagaagaccggcagct
ggcagaggaggagcccgcggcaggggcaaaaagccagctgatgaggatgatgaggacgag
gaggaagaggaggcccccagaaaccgcagaggagccaacaagaagaaggctgctaagtca
cgtgacaccgacgacgaaagtgaggatgacacccccaagagaagacaaggaagagcagca
aataaaggagcagcaaacaaaaagaaaggaggaaaggcccaggacaatgacgaggacagc
gaggaggagaaggggaacaagagaaacaagaagggagccacgggaaagaaggggaaagaa
gaggagaccaaagataagaaaggagacgccaaagggaagggcaaaggaaaggagaaggaa
gacgagaaggacaagaagaagaagaagaagaaagagagcagctcagacacagactctaac
acagactcagaggaagagtccatgtcagagggagagatggaacgactgaaggaggaggtg
gaggagaagaagaaggtcatagctattatgaggaacaagccctggcgaatgaagaggagg
ctggtacatctgaaagaatgtcaagaatttgtggataaatttgaaggggctctgggaaaa
ggaaaaggcaggaagttttatgcttataaaatcatgatgatgaagaaatggatcaaattc
caaagagattttgataatttcaaaacgacttgcataccatgggaacgaaagataaaagag
gttgaaagtcactttgggtcctcagttgcttcctacttcatcttcctgcgctggatgtat
ggcatgaacatggtcctctttggcttaaccttcggactggttgtgatcccagaggttctg
atgggacttccgtatggatccattcccagaaagacagtgcccagagctgagcagcccact
gctcaagactactctgtcctcatggacttcaacgggtattgcaaatactcagtcctcttc
tatggttactacaacaaccagaggaccattgggctgctgaagttccgcctcccgctgtct
tacctcatggtaggagtggggacttttggctacagcctgatggtggtgatacgaacaatg
gctaagaatgctgacgtggggggaggggacggagatgacggggagttcacctttgcctgg
aagatgttcaccagctgggattacctcatcggcaaccccgagacggctgacaacaagtac
gcctccatcaccaccagcttcaaggagtccatcgtggatgagcaggagaaccaaaaggat
gagaacatccacctgaggaggttcctgcgtgtgctggccaacttcatgatcatctgctgc
ctgggaggaagtggctacctcatcttctttgtggtgaagaggtcccaggaatttgccaac
agggacgacctgagctggtacgagaaaaacgagttggagctcatcatgtccctgttgggc
ctggtgtgtcctcccctgtttgagaccatcgctgagctggaggagtaccacccccggatc
gccctcaaatggcagctggggcgcatctttgccctctttctgggaaacctctacactttc
ctgtttgccctgtttgatgaggtcaacaacaagcttgaggaggaggtgtccattaggaat
gcgtccatctgggcccagaaggaatactacgctaacttcaccctctacaacaatgacacg
gacaccaccccgccccccatggacccctctgacgtcatcaggggaccatgctgggagacc
gccgtcggcatagagtttgtgaagctgaccgtgtcagacatccaggtgacctacttgacc
atcctgattggtgactttgcgcgggctgtcattgtcaggttcctcaactactgctggtgc
tgggacctcgaagccacatatccatcgtatggagagtttgacatcagtggcaacgttctt
ggtctggtcttcaaccaaggaatgatctggatgggtgcattctatgctccagggctggta
gggataaacgtcctgcgtctcctctcctccatgtactaccagtgctgggccgtaatggcc
actaacgtgccccatgagagggtcttcaaagcctccaaatccaacaacttctacatgggc
ctcctccttctcatcctctttctcagtctactgcctgtggtctacaccatcatgactttg
ccaccctcctttgactgtgggccattcagtgggaaggccaagatgtttgatgtcatcatg
gagacgatagacctggacctgcctgcctttctgggaacactgatgggctacgcagccaac
cctggcctcattataccagctgtgctactgatggtactggctatctactatttgaactcg
gtatctgaggcgtaccaacatgccaatgcggagctgaagaagaagatgcagatggcaaga
gatgaggagaagaacaggaggaacaacactgaaagcacagaccaggtcatgaaggacctg
gaggacctgctccccaaccgctctctcttgcccccagctcccccaccagagacaggtgca
gacaataaagcagaccaaggtggaaagtctacaaaggtgaggccaggaactgcaggcaag
gatgtgaacctgcagaaagacgtgtccctgtcatcaccaaatcccaacgctcgaggcgca
gtgacccgcccaccgggtccccgggggcctggacctctgcctggaaatggtcagcagggg
ccaggagggggaccagggcggggacgggggagaggacagccacctccaagacgctag
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