Oncorhynchus kisutch (coho salmon): 109873597
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Entry
109873597 CDS
T09179
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109873597
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109873597
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
109873597
NCBI-ProteinID:
XP_031664813
Ensembl:
ENSOKIG00005026243
LinkDB
All DBs
Position
LG29:19024770..19130719
Genome browser
AA seq
2157 aa
AA seq
DB search
MTTAANWVANGASLEDCHSNLFSLAELTGIKWRCYSFRGGGEYGPVISAPAQDDPVLRSF
IRCVQANLLCVWRRKVKPDAKELWIFWWGDEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKDFVRIGKWFVKPYELEEKHMGTSEHLSCSFTFFLHGESNVCTS
VEVAQHQPTYHITDDHTRLAQISSAPVQVILSPYGLAGSLTGQAYKMSDPAVRKLMEEWS
YFYPMVLQRHREGGAGTGGMGAEREGTDRPYDPHSHVAVEVIVGGVRMIYPAAFVLVAQG
DLPVEEPPPAPGAQGGSRDPSHCSIPLTPPTSPEQPCSADSGFVTTVSSVLPAQESAMGV
TNSPKHSGKKLTNQVVHQAWKECYLNQLQHKCSGPSSVTPKKEAPNGVPTWDFTDPEERA
PCSCSRLKQQKQQQQTNTSSANPPSGANPTPSSGPALPPPSLPKHKATDKPEKADKQPKR
AAAMTPFHHRLSVGQEACLEQDSSGGSQLGLVSLDPPLDPMPSCKYPKPLSAGRKAPESL
LHSPVSPLPPTLSPHPRGGQDPEVLDTSVGMAPCPDGASGMGGMEPSETALYAAPLGPRE
REAGAGWWRGFRTPRADKAEFRPPELPSDRVEVKTETQATEGVALKRLFMQTQKRFKISE
ECVRAHIQTLGLLHQPGDPGDDPYDFKEGDIEYSFPTSKRLKGQGRDPSKRGPKGEEISN
GALPDGKDAMSIFSSAPKADDDSPQDDDAAAKAQNPSLTRETDLVVLISDLENIFDEDEE
ELRTACPNQHTARVLVSGSEDRREGRVAVPYPSTAADLQRMFPTPPSLEQHPAFSPIMTY
RDTPSQEPPAPSVGSDHPLGPLSSTQLQEYRMEVEEGMASPKPEDIKDFSFVYRVPSVQP
QMGCSMFAPLRTLPSQCLPPLKLPDQCYYRPSWALLPKMEHYSSLPPSHHTPFIRDGYVN
IPSVGDQEYAQLSASALSVGTTGGILPSPSPATPRFSVPTPRTPRTPRGVGTASGQGSVK
QEGTGTELSSPTSTPSTSLPMSSVAEPHMSSPPIPEAHSLYAALLLSDSVLNVFKDRNFD
SCCICACNMNVKGADVGVYIPDSTLEDQYRCMCGFSAIVNRRLAHGTGLFLEDELDIFGR
GSEVGQAAERRLALCRRDPPMGDPRAKRPQDSSPAPSSVMVLLQQQCSQPISSLASMHLP
PSCSCHGRQGALLHSWMADKQWADGSDACVECYNALVQGQQYVDNPAGGKVDPAVVRSSA
LHSWPHTNMLDISMLSSQDVVRMLLSLQPYLQDAIQKKRMGRTWENIQHVQGPLTWQQFH
KMAGRGSYGSEESPEPLPIPTLLLGYYDYYDRNFLALSPLALPFWEKLLLEPYGGQRDVA
FLVLCPNSDTLLAGARVFFQELSAVYETCRLGKHRPLAKVSRDGLVRVGAVDTETETEKE
KEKERQEEEQIDQWFTGPWAGQQHIDNLRKLKLYARACRRQLGPQLSALSLDSSLFIPPK
HQPPLAPTPSSAQPAPSSSQPPSGPGAPAEGEPAAAPSSGSTPTPTAAASDQPGPAEITQ
GGAAEAKTTPNATPPPPSQPAETPESLAERERIGIPTLADSADSHAHPPAIVIYVVDPFL
CSGGSRDSGGGGEEEEGEEVEAGSVWLLGLMRCYTEMLKTLPESMRPALVLQVVPCQYLL
QPASGESPLYLQHLRSLAFSAYSQCRRLLPTKTHIKSLTGFGPASTLESVLKSPEHPSPL
QGYSPPYILGPTRAKMPEPGEVWAEIPPRYNVLFVGYCLSHDQRWILVSCTDQQGELLET
CIINIDVPNRVRRPKVSARKMGLQKLWDWCVGIIQMTSLPWRIVIGRLGRLGHGELKDWS
VLLGEHSLHSISRQLKEACRMCGISSADSPSILSACLVAMEPQGSIVVMPDAVTMGSVFG
RSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAASSYPTEDNADDMFDLPFPDELEND
IGHDILNLHPSPNTSPVPSPGSPSGMGGSSHFQHNRSQGERLLSRENPPEELKQQPLALG
YYVSTAQADSLPHWFWASCPQAQNQCPLFLKASLHHHISIATAQSDEPTQTSSDKTAKRT
PHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRRSCLPVHLAVLTQMYNAILNML
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcagcgaattgggtggctaacggggcaagccttgaagactgccactccaac
ctcttctctctggcggagctgacgggcatcaaatggcggtgctacagcttccgcggcggt
ggcgagtacggaccggtgatctcagcgccggcacaggatgacccggtgctgcgcagcttc
atacgctgtgtgcaggccaacctgctgtgtgtgtggcgccgcaaagtcaagcctgacgcc
aaggagctgtggatcttctggtggggcgatgagcccaacctctccgacgtcatccatcac
gagctggaagtggctgaggagggactatgggagtgtgggctgtcatatgaatgccggacc
ctcctgttcaaggccattcacaacctgctggagaggtgtctgatggacaaggactttgtg
cggattgggaagtggtttgtcaagccatacgagctggaggagaagcatatgggcaccagt
gagcacctgtcgtgctccttcaccttcttcctgcatggggagagtaacgtgtgcaccagt
gtagaagtcgcccagcaccagcctacctaccacatcactgacgaccacacccgcctggcc
cagatctcctcagcccctgtacaagtgatcctgagtccgtacggtctggcaggctccctg
actggccaagcctataagatgagtgacccagctgtaagaaaactgatggaggagtggagc
tacttctaccccatggtgcttcagcgccacagagaagggggcgcaggcacggggggcatg
ggcgccgagagggagggcactgaccgaccatatgacccacacagccatgtggccgttgag
gtcatcgtaggtggtgtgaggatgatctacccagcagcgtttgtgctggttgcccaaggc
gacctgcctgtggaggagcccccacctgcaccgggagcccaggggggcagcagagaccca
tctcactgcagcattcccctcacaccccccacttcacctgaacagccctgctcagcggac
agtggctttgtgacaacggtgtccagcgtcctccctgcccaggagagtgccatgggggtc
accaacagcccaaagcattctgggaagaaactgaccaatcaggtggtgcatcaggcgtgg
aaggagtgttatcttaaccaactgcaacacaaatgcagtgggcccagtagcgtgacgcca
aagaaggaggcgccaaatggggtgcccacctgggacttcaccgacccagaggagagggca
ccatgcagctgctccaggttaaagcagcagaaacagcagcagcagaccaacacctcctct
gccaaccctccgtctggtgccaacccaaccccctcctctggcccggccctcccccctccc
tccctgcccaagcacaaggccacggacaaacccgagaaagccgacaaacagccgaagaga
gccgccgccatgacccccttccaccaccgcctctctgtgggccaggaggcctgcctggaa
caagactcatctggagggtcccagctcggcctagtcagcctggaccctcccctggatccc
atgcccagctgcaagtaccccaagcccctctccgccggcagaaaagctccagagtccctg
ctccactcccctgtctccccattaccccccacgctcagcccccatccacgggggggacaa
gaccctgaggtactggacacctctgtgggcatggccccctgtccggatggggcatcaggg
atgggggggatggaacccagtgagacggctctgtatgcagcccctctggggcccagggag
agggaggctggggcaggctggtggaggggcttcaggactcccagggctgataaggctgag
ttcaggcctccagagctccccagtgacagagtggaagtaaagacagagacgcaggccact
gagggagttgcactgaagagactattcatgcagacacagaagcgcttcaagatctcggag
gagtgtgttagggcccacatccagaccctgggtctcctgcatcagcctggggaccccggg
gatgacccctacgacttcaaggagggagacatcgagtacagcttccccacctccaagaga
ctgaagggccagggcagagaccccagcaaaagaggccccaaaggagaggagatcagcaac
ggtgcactgcctgatgggaaagacgccatgtccatctttagctctgctcccaaagctgat
gatgactcaccgcaggatgatgatgcggcggccaaagcccaaaacccttctctaaccagg
gagactgatctggtggtcctcatctcagacctggagaacatcttcgacgaggatgaggag
gaacttaggactgcttgccccaaccagcacacagccagggtcctggtatcaggaagtgaa
gatcggagggaagggagggtggctgtgccctatccttcaacagcagcagacctccagcgg
atgtttcccacacccccttccctggagcagcacccggccttctcccccatcatgacatac
cgcgacacccccagccaggagcccccagccccctcggtgggctccgaccaccccctgggc
cccctgtcctccacccagctccaggagtaccggatggaggtggaagagggcatggccagt
cccaaacctgaggacatcaaggacttctcatttgtgtaccgtgtcccctccgtccagcca
cagatgggctgctccatgtttgctccgctgcggaccctccccagccagtgtctgcccccc
ctcaagttgcctgaccagtgttactaccggccttcctgggccctgttgcccaagatggag
cactactcctccctgccgccctctcatcacaccccattcatcagagatggatatgtcaac
atccccagtgttggggaccaggagtatgcccagttgagtgccagcgctctctccgtgggc
accaccggtggcatcctcccctcaccctcccctgccaccccccgcttttctgtccccacc
cctcgtaccccccgcacccccagaggcgttggcacggccagcgggcagggctcggtgaag
caggagggcaccgggacagagctgagctcccctacctccacgccttccaccagcctgcct
atgagctccgtagctgagccccatatgtccagccccccaatacccgaggcccacagcctg
tacgccgccctgcttctctctgactcagtcctcaatgtcttcaaagaccgcaactttgac
agctgctgcatctgcgcctgcaacatgaatgtgaagggcgccgacgtgggtgtgtacatc
cccgactccacgcttgaggaccagtaccgctgcatgtgcggcttcagcgccatcgtcaac
cgccggctggcccacggcacgggcctcttcctggaggacgagctggacatcttcgggagg
ggctcagaggtgggccaggcggctgagaggagactggcgctctgccgcagagacccaccc
atgggagacccccgggctaagcgcccccaggactcctcccctgccccttcctctgttatg
gtgctcctccagcagcagtgctcccagcccatctcctccctggcctccatgcacctccct
ccttcctgctcctgccacggccgccagggggccctgctccatagctggatggctgacaag
cagtgggcggatggcagtgatgcgtgtgtggagtgttacaacgcgctggtacagggacag
cagtatgtggataaccccgccggagggaaagtagatccggctgttgtgaggagcagcgct
ctacattcctggcctcacaccaatatgctggacatcagtatgctgtcatcccaggacgtg
gtgcgtatgctgctgtcgctgcagccctacctccaggacgccatccagaagaaacggatg
ggccggacctgggagaacatccagcacgtacaaggaccgctcacatggcaacagttccac
aagatggctggacggggctcctacgggtccgaggagtcgccagagcctctgcctattccc
accctgttgttgggctactacgactactatgatcgtaacttcctggcgctgtcgcccctg
gcgctgcccttctgggagaagctgctgttggaaccgtacgggggacagagagacgtggcc
ttcctggtgctctgccccaactctgacaccctgctggctggggcacgggtcttcttccag
gagctcagcgctgtctacgagacatgccggttggggaaacacagacccctggccaaggtg
tccagagatggcctggtgcgtgtgggggcagtggacacagagacagaaacagagaaggag
aaagagaaggagaggcaggaggaggagcagatagaccagtggttcacagggccctgggct
ggacagcaacacatcgacaacctcagaaaacttaaactctatgcccgagcctgcagaagg
cagctaggtccacagttgtctgccctgtctttggacagtagtctgtttataccccccaag
catcagcctcccttagcccctacgccctcctcagcccagcctgccccctcctccagccag
cccccctctggccccggggcccctgctgagggagaaccagcggcagcccctagctcagga
agcacccccacccccacggcagcagcctcggaccaaccaggcccagcagagattacccaa
ggaggggccgctgaggccaagactacccccaatgccacaccacccccacccagccagcca
gcagagacccctgagagtttggcagagcgggagcgaatcggcattcccacgctggcggac
tcagccgatagccacgcccaccccccggccatcgtgatctatgtggtggaccccttcctc
tgctcaggcggatcgagggatagtggaggaggtggagaggaggaggagggagaggaggtg
gaggcgggcagtgtgtggttactagggctgatgcgttgctacacagagatgctaaagaca
ttgccggagagcatgagaccagctctggtgttacaggtggtgccttgtcagtacctgctc
cagccagccagtggtgagagccctctgtacctgcagcacctgcgctccctggccttctca
gcctactctcagtgcagacgcctcctacccacaaagacacacatcaagtctctgaccggt
ttcggccccgcctccaccctagaatctgtgcttaagagcccagagcaccccagccctcta
cagggctactctcccccgtacattctgggtcctacccgtgccaagatgccggagccaggg
gaggtgtgggcagagatccctcctaggtacaacgtgctgtttgtgggctactgcctgtcc
cacgaccagcgctggatcctggtctcctgtaccgaccaacagggagagctactggagacc
tgcatcatcaacattgacgtgcccaacagagtgcggcggcccaaggtctcggccaggaag
atggggctgcagaagttatgggactggtgtgtcggcatcatccagatgacctcactgccc
tggaggatcgtgattggtcggctgggcagactaggacacggggaactgaaagactggagc
gttctcctgggggagcactccctccactccatcagtcgccagctgaaggaggcgtgtcgt
atgtgcggcatctcctccgcggactccccctccatcctcagcgcctgcctggttgccatg
gagccccagggttccatcgtggtgatgccagatgcggttacaatgggctcggtgtttggt
cgcagcacggccctcaacctgcagacgtcccagctgaacacccctcaggatgcttcctgt
acccacatcctggtattccccacctccgccaccacccagctggccgccagctcctacccc
acagaggacaacgccgatgacatgttcgacctgcctttccctgatgagctggagaatgac
ataggacatgacattctcaaccttcacccttcccccaacacctccccagtaccctcccct
ggctccccctctggcatggggggaagctcacatttccagcataacaggagtcagggagag
aggcttctgtccagggagaaccctccggaggagctgaagcagcagcctttagcccttgga
tactacgtctccactgcccaggccgacagcctgcctcactggttctgggcctcctgccct
caggctcagaaccagtgtccactcttcctcaaggcatcgctacaccatcacatctccatc
gccacagcccaatcagacgagcccactcagacgagctcagacaagaccgctaagaggacg
cctcaccctctggactccaagaccacctctgacgtgctcaggtttgtgttggagcagtac
aacgccctctcgtggctgacgtgtaaccctgccacccaggaccgccgctcctgcctgccc
gtccacctggccgtgctcacacagatgtacaatgccatcctcaacatgctctag
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integrated database retrieval system
