KEGG   Oncorhynchus kisutch (coho salmon): 109873696
Entry
109873696         CDS       T09179                                 
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109873696
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    109873696
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 109873696
NCBI-ProteinID: XP_020320950
Ensembl: ENSOKIG00005046829
LinkDB
Position
LG29:34107287..34116921
AA seq 1465 aa
MSDENAYTTSVNDTSGVGVEENVVGLKAGCQSPESGLSQTGSSGSSNGKRTRSGGKSSPK
SSNSDDTDAHSSGNDSAEREVEGHMGRETSTCSSSHNGKESAMETTESKSANSHSSSPPN
SSMVYSLLSGSSEQDHPSTSGCSSDQPARLQTQRELLKALKELKIRMPADHWAKGRSSTL
ASLQYALNCVKQVRANQEYYHQWSVEESHGCSLDLSSFTTEELDNITSEYTLQNTDTFSV
GVSFLSGKLVYISPQASPMLRTKPNRLQGTLFSELLAPQDVSTFYSSTAPCRLPPWASCT
GSMTSPVDCTQEKSMFCRISSGRDSEGEVRYYPFRMTPYQLTLRDSDMSQPQPCCLLIAE
KVHSGYEAPRIPADKRIFNTSHTPGCLFQEVDERAVPLLGYLPQDLVGTPVLMYLHPDDR
PVMVAIHKKILQSAGQPFEHSPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKVR
TSPLNEDVFTPSMEVEVRAMSPEIPRLSEQIHRVLVQPVHSGVSQGYCSSHGSQPHRPSP
GSSGSSSPSTKGIIQMTIQRPQQMTFQQMCKDVHMVKTNGQQVFIESRNRPPLRKHASAG
DLVTPENLNKDLGPIGALGPTKTLASVQSRKDPSANYSYQQINCLDSIVRYLESCNVPNT
VKRKCGSSSCTTSSTSDDDKQRELSGTAKDLEGSQGKEGSKGGPQMSPLALHCKAESVVS
LTSQCSFSSTIVHVGDKKPPESVSTLFPADIIMMMEETPPTTTAPAINNAITTAVTPRPS
TFPSPATPSPAQPERDSRRSAGCSGSLGLTKEVLSAHTQQEEQVFLSRFRDLGQLRMLDP
GPPLRGHTTTPKGVHTSKDYPTGGNGRRRGRGAKKPKHQQEGSQHGGRPKTGSGMNRSSR
REGQGHQGPMFPMGQPLMRQGPLTSSSSWPTSVASLPPAVSQYPPGVLPFFPLYPNVQQQ
QLLAHTGVNPNAMQMGYPSPQPGFQYPLHANQISMPMAPPMMVVLPNYMFPQLNGGVPQL
NQLNTAMPQYNTAMPHLNPSIPGMAQLNQALPQFNQAIPLPQLNPVLAQFNPSVTQMNGM
PQAQHNPSQVNPALQVNPALSMIPQHFHNPNPTLPFPNPIPVPGLPCFALPRIDPTFVPR
GNSRSSTPQSTCQSPLEGTNTPLFQSRCSSPLNLLQLEELPGNRQEGMSTGAQQTPPPPG
SSSQVGGQGSVNRNMKGDAKEYDNADVDNQDAMSTSSDLLDLLLQEDACSGTGSAASGSG
SSGSGSSGSNGCSTSGSDRRSSNTSKYFGSVDSSENDHKQAAGGAEEAQLMKYVLQNPIW
LLMANTDDKVMMTYQMPTRDRETVLRQDRMVLRAVQKQQPHFTEEQKRELIQVHPWMGTG
RLPQAINNPTCTGCSSPPATSAPRTFDVELQDMDLTGVLQLQEEATAHTETHVTMATDTS
ISPPQAPQTETKGGEAERQGEQEGN
NT seq 4398 nt   +upstreamnt  +downstreamnt
atgagtgatgagaatgcatataccacttctgtaaatgacactagtggagtaggtgtagaa
gaaaatgtggtgggactgaaggcgggctgccagtcccctgagtctggactgagtcagact
ggcagctctggtagctccaatggaaagagaactcggtctgggggcaagtcctcccccaag
tcctcaaactccgatgacaccgatgcccactcgagtgggaacgactcagccgaacgagag
gtggaaggtcacatgggacgtgagacatcaacctgcagcagctcccataacgggaaggaa
tctgccatggagacaacagagagcaaaagcgccaactcccacagctcttcccctcccaac
agctctatggtctacagcctgctgagtggcagctcggagcaggaccacccgtccaccagc
ggatgcagcagtgaccagccagcccggctgcagacccagagagagctgctcaaggctctg
aaggagctaaagatccgcatgcctgcagaccactgggcgaaaggccgctccagcaccctg
gcctccctgcagtatgctctcaactgtgtcaaacaagtccgagcgaatcaggagtattat
caccagtggagtgtggaagagagccacggttgcagtctggacctctcttccttcaccaca
gaggaactggacaacattacttctgaatacacactccagaacacggacacgttctcagtg
ggagtgtcctttctctctgggaagttggtgtacatctccccccaggcctctcccatgctg
cgcactaagcctaatcgactccaggggacactcttctctgagctgttggccccccaggac
gtcagcactttctacagcagcactgctccctgccgcctgcccccctgggcctcctgtact
ggttccatgacctcccctgtggactgcacccaggagaaatccatgttctgccgtatcagt
agtgggagggacagtgagggggaagtgcgatactaccccttccgtatgaccccctaccag
ctaaccctacgggactccgacatgtcccagccacagccctgctgcctgctcatcgctgag
aaggtgcactcaggatacgaagctccccgcatcccagcggacaagaggatttttaacact
agccacacccccggctgtctctttcaggaagtggatgaaagagctgtgccgttgctaggc
tacctgccccaggacctggttgggactcctgtcctcatgtacctccaccctgatgacagg
cctgtcatggtggccatacacaagaagattctccagtcagcgggccagccctttgaacac
tcgcccctgcgtatgtgtgcccggaacggggagtatctcaccatagataccagctggtcc
tccttcgtcaacccctggagccgcaaagtggccttcatcgtgggtcgacacaaagtcaga
acgagtcccctgaacgaagatgtgtttacccctagtatggaggtggaggtgcgggccatg
tctccagagatccccaggctcagtgagcaaatccaccgtgtgctggtgcagcctgtccac
agtggtgtctcccagggctactgcagctcccatggatcccagccacacaggcccagcccg
ggctcctcaggcagcagcagcccctccactaaggggatcatccagatgactatccagaga
ccacagcagatgacattccagcagatgtgtaaggacgtccacatggtgaagaccaatggt
cagcaggtcttcatcgagtcccgcaaccgcccaccgctccgcaaacacgccagcgctgga
gatctcgtgacgccagagaatttaaacaaagacttgggacctattggtgctctggggcca
actaaaaccctggcctccgtgcagtcaaggaaagatccatcagccaactactcctaccag
cagatcaactgtctggacagcatcgtacgctacctggagagctgtaacgtccccaacaca
gtgaagaggaaatgtggctcctcctcctgcaccacatcatcaacgtcagacgatgacaag
cagagggagttgtctggaacagctaaagatctcgaagggtcacagggtaaggaagggtct
aaaggggggccacagatgagtcctctggcgctgcactgcaaggctgaaagtgtggtctct
ctcacgtcccaatgcagcttcagcagcaccatcgtccatgtaggggacaagaagccccca
gagtcagtgtcaaccttattccctgcagatattatcatgatgatggaggagacaccaccc
accaccaccgccccagccattaacaacgccatcaccacggcagtgaccccccgtccctca
acctttcccagcccagcaacacccagccctgcccagcctgagagggatagccgcaggtcg
gctggatgctcaggcagcctgggtctgaccaaggaggtgctgtctgcccacacccagcag
gaggaacaggtgttcctgagccggttcagggacctgggacagctccgcatgctggacccc
ggtcctcctctgagaggacacaccaccacacccaaaggagtgcacacctcgaaggactac
ccaacaggtggtaacggacggaggaggggccggggggcaaagaagccgaagcaccagcag
gagggctcccagcacggtggccgtcccaagacaggctcagggatgaacagaagttccaga
agggaagggcaggggcaccaaggccccatgttccccatgggtcaacccctaatgagacag
ggacctctgacctcgtcctcttcctggcccacctctgtggccagcctccctcctgccgtg
tcccagtaccctccaggagtcctgcccttcttccccctctaccccaacgtgcaacaacaa
caactcctggcccacaccggggtgaaccccaatgccatgcagatgggttaccccagcccc
cagccaggcttccagtaccccctgcatgccaatcagatttccatgccaatggctcccccg
atgatggttgttctgcccaactacatgttccctcaactcaatggaggtgtaccacagctc
aaccagctcaatactgccatgcctcagtataacacagccatgcctcaccttaaccccagt
atccctggtatggcacaacttaaccaggcactaccgcagttcaaccaggctatcccacta
ccacaactcaatcctgtcttggctcaattcaacccttctgtgacgcagatgaatggcatg
cctcaagctcaacacaacccgtcacaggtcaatcctgcattacaggtcaatcctgctttg
tcgatgatcccacaacattttcacaatcccaacccaacattacctttcccaaatcccatt
ccggtgcccgggcttccttgctttgccttacccaggattgatcccacttttgtcccacgt
ggcaactcccgctccagcacccctcagtccacatgccaatcccccctggaggggaccaac
acgcccctcttccagtcacgatgctcctcccccctcaacttgctgcagctggaggagttg
ccaggcaacaggcaggagggcatgtcaacaggggcgcagcagaccccacccccacctggc
tcgtcgtctcaggtcggaggtcaaggctctgttaaccgcaacatgaagggtgatgccaaa
gagtacgataatgctgatgttgataaccaggacgccatgtccacctccagtgacctgctg
gaccttctgctgcaagaggatgcctgctcagggaccggctcggctgcctctggctcgggg
tcctctggctccgggtcctctggctctaatggatgcagcacctcagggagtgacagaaga
agcagcaacaccagcaagtactttggcagcgttgactcatcggagaacgaccataagcag
gcagcaggcggggctgaagaggcccagctcatgaagtatgtccttcagaaccctatctgg
ctcctcatggccaacacagatgacaaggttatgatgacgtaccaaatgcccaccagggac
agggagactgttctaaggcaagatcgtatggtactgagggcggtgcagaaacagcagccg
cacttcactgaggagcagaagcgagagctgatccaggtccacccctggatgggcactgga
cgcctgccacaggccatcaacaaccctacttgtaccgggtgcagttctcctccagctacc
tccgccccccggacctttgatgtggagctgcaggacatggatctgactggggtcctccag
ctacaggaagaggctaccgcacacacagagacacatgttaccatggcaacagacacttcc
atctctccacctcaagccccccagacagagactaaggggggtgaggctgagaggcaaggg
gagcaggaaggaaactaa

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