Oncorhynchus kisutch (coho salmon): 109873741
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Entry
109873741 CDS
T09179
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
oki04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109873741
04371 Apelin signaling pathway
109873741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109873741
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
109873741
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
109873741
NCBI-ProteinID:
XP_020321028
Ensembl:
ENSOKIG00005043339
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Position
LG29:complement(9265777..9296344)
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AA seq
478 aa
AA seq
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MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGFDSPDIEADDSAGQSPESEDKYRKI
NDDIDLMISRQRLCQALPPSNYDMVGSIQGQNNSGLLYSQPGVGGSLGNHNLPPLSHTHP
GLQRNSMSPGPQHTHRPPSAGNAGGMMVSELSNGVSNTGNGSYGNHRHSPGLLSPGCVAK
GMQAKTPPLMTSMTLSGNRKPDLRTLLPPGNKNNMPSVNQRINHSQSAQSLATPVVSIAT
PTLPGQGMGGYPSALSTSYGTEYSLGDLSSLSGFGGNGSGSVHLGSVTGWQQQQLQNMQH
SALGHMGNLCQNSNLNLQNVHQNLHIKSEPASPPRDRGIGFVSGGMGAVPQGYLTNQGPA
EAGRSPGDSLSSCGSSYDGSDREDHRGNDNFLLRPMSNQDERHSPSVKRMRLSEGWAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagatccagatagcacggattatggatgaacgcaacagacaggtgacg
ttcaccaagaggaagtttggcctgatgaagaaggcgtacgagctgagcgtgctgtgtgac
tgtgagatcgccctcatcatcttcaacagcaccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagcctcacgagagcaggacc
aactctgacatcgtggagactctacgaaagaagggtctaaatggctttgacagtcccgac
atcgaggcagacgactctgctggtcagagccccgagtcagaggataaataccgcaagatc
aacgacgatatcgacctcatgatcagcagacagagactctgtcaggctctccccccctct
aactacgacatggttggctccatccagggccaaaataacagcggactactctactctcaa
cctggggtggggggttccttaggaaaccacaatctgccgcccctctcacacacacacccc
gggctgcagaggaacagcatgtcgcctggaccccaacacacacaccgacctcccagcgct
ggaaacgcaggagggatgatggtctcggagctgtctaacggcgtctctaacactggtaat
ggtagctatggtaaccaccgtcactctccggggctgctgtctccgggatgtgtggccaaa
ggcatgcaggccaagactccgcccctgatgacctccatgaccctgagtggtaaccgcaag
ccagacctccgcacgctgctgccccctggcaacaaaaacaacatgccctcagttaaccag
agaataaatcactcccagtctgcccagtctttggctactcctgtggtctccatagcaaca
cctactctgcccgggcagggtatgggagggtacccctctgccctctccacctcctatggc
acagagtactctctgggtgacctgagctctctgtcaggcttcggagggaacggctctgga
tcagttcacctgggatcagtaacaggctggcagcaacaacagctacagaacatgcagcac
tcagcactaggacacatgggaaacctttgtcagaactccaacctcaacctccagaatgtc
catcagaaccttcacatcaagtcagagcccgcctccccgcccagagatcgaggcatcgga
tttgtcagcggagggatgggggccgtgccccagggctacctaacaaatcaaggcccagcc
gaggcagggcggtctcctggcgacagcctatccagctgtgggagctcatacgacggcagc
gaccgcgaggatcaccgcggaaacgacaacttcctgctgcgcccgatgtccaatcaggat
gaacgccacagcccgtccgtcaaacgcatgcgcctatcagaaggctgggctacatga
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