Oncorhynchus kisutch (coho salmon): 109873780
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Entry
109873780 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 1-like isoform X2
KO
K12890
serine/arginine-rich splicing factor 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109873780
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109873780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109873780
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109873780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109873780
NCBI-ProteinID:
XP_020321076
Ensembl:
ENSOKIG00005027936
LinkDB
All DBs
Position
LG29:complement(41336461..41346814)
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AA seq
237 aa
AA seq
DB search
MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGGGRGGGGGDGG
APRGRYGPPSRRSEYRVIVSGLPSSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKE
DMTYAVRKLDNTKFRSHEEGCDWRRALSPRPGANQTFRIRAGIRIKDGERTRSGTGA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagataatatgtcgggcggcgggagcgtggttcgtggcccagcgggaaacaac
gactgtcggatctacgtgggtaacctgccgcctgatattcgcactaaagacgtggaggat
gtgttttataagtacggggcgatccgagatatcgatctgaagaaccggagaggaggacct
ccgttcgcttttgtggaattcgaggaccccagggatgctgatgatgcggtgcatggtcgt
gatggttatgactatgatggttaccgtctccgggtggagttcccccgtagtgggcgtggg
ggagggagagggggtggtggtggcggcggcggaaggggtggtggcggcggcgatggagga
gccccaagaggtcgatacggacctccctcacgtcgctcagagtacagagtcatcgtctca
ggtctcccctctagtggtagctggcaggacctaaaggaccacatgcgcgaggcaggtgat
gtatgttacgctgacgtgttccgagacggtaccggcgtggtggagttcgtacgcaaggag
gacatgacctacgctgtccgcaagctggacaacaccaagttccgctcccacgaggagggc
tgtgattggaggagggctctgtctccccgtcctggagccaatcagaccttcaggatcaga
gcagggattaggattaaggatggagagagaacgcggagtgggacaggagcatag
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integrated database retrieval system
