KEGG   Oncorhynchus kisutch (coho salmon): 109873793
Entry
109873793         CDS       T09179                                 
Name
(RefSeq) ras-related protein rab7-like isoform X1
  KO
K07897  Ras-related protein Rab-7A
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04137  Mitophagy - animal
oki04140  Autophagy - animal
oki04144  Endocytosis
oki04145  Phagosome
oki04148  Efferocytosis
oki05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    109873793
   04145 Phagosome
    109873793
   04140 Autophagy - animal
    109873793
   04137 Mitophagy - animal
    109873793
   04148 Efferocytosis
    109873793
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109873793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109873793
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109873793
   04031 GTP-binding proteins [BR:oki04031]
    109873793
Membrane trafficking [BR:oki04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    109873793
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109873793
  Exosomal proteins of other body fluids (saliva and urine)
   109873793
  Exosomal proteins of colorectal cancer cells
   109873793
  Exosomal proteins of bladder cancer cells
   109873793
GTP-binding proteins [BR:oki04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    109873793
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW PduV-EutP ATP_bind_1 nSTAND3 Septin AAA_16 NTPase_1 AAA_22 AAA_7 DUF5992 AAA_24 G-alpha AAA_5 SRPRB ATPase_2 NACHT NB-ARC AAA_14 ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 109873793
NCBI-ProteinID: XP_020321094
Ensembl: ENSOKIG00005042716
LinkDB
Position
LG29:complement(8901093..8910488)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPAEPSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacttctctgatgaaccagtatgtaaataagaagttcagtaaccagtacaaggccact
ataggagcggacttcctcaccaaggaggtgatggtggacgacaggctggtcaccatgcag
atctgggacacggccgggcaggagcggttccagtctctgggcgtggcgttctaccgcggc
gctgactgctgtgtgctggtctacgatgtcacggcgcccaacaccttcaagacactggac
agctggagggatgagttcctgatccaggccagccccagagacccagacaacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacgacaaaacgtgcccag
gcctggtgtgccagtaagagcagcatcccctactttgagaccagcgccaaggaggccatc
aacgtagaccaagcattccagaccattgcccgcaatgcccttaaacaggagtctgaggtg
gagacgtatgacttcccagaccagatcaaactgagagacgaccggcccgccgaacccagc
gacggctgctcctgctga

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