Oncorhynchus kisutch (coho salmon): 109873796
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Entry
109873796 CDS
T09179
Name
(RefSeq) calpain-1 catalytic subunit-like
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04141
Protein processing in endoplasmic reticulum
oki04210
Apoptosis
oki04217
Necroptosis
oki04218
Cellular senescence
oki04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109873796
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109873796
04217 Necroptosis
109873796
04218 Cellular senescence
109873796
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109873796
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109873796
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
109873796
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C2: calpain family
109873796
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Ndufs5
Motif
Other DBs
NCBI-GeneID:
109873796
NCBI-ProteinID:
XP_020321100
Ensembl:
ENSOKIG00005045331
UniProt:
A0A8C7KPC6
LinkDB
All DBs
Position
LG29:28669454..28676766
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AA seq
712 aa
AA seq
DB search
MEQVMEQVIERVFASGVAARLRSQWDRNEGIGQNDKALKFLGQDFEYLRSHSLQSRRLFE
DDAFPAQISSLGFKELGSRSTKTQGVRWMRPTEFCSDPHFIVDGATRTDVCQGALGDCWL
LAAIASLTLNETLLHRVVPHGQSFHQQYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLF
LHSAEGAEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELKKAHPDLFSI
ISRAVERGSLLGCSIDISGVFEMEAMTFKKLVKGHAYSVTGVEEVEFKGSPTKLLRIRNP
WGEVEWTGAWSDNSREWAGVDPSVRARLYNRSEDGEFWMSFRDFLREFSRLEICNLTADA
LQASQVKKWSSTLYPGEWRRGSTAGGCRNYPATFWLNPQFKVALQHPDTDGQSGCSFLVA
LMQKDRRRQRREGKDMETIGFTIYEVPEEFTGRAGVHLKRDFFLTHGSSARSELFINLRE
VSTRFCLPQGEYIVIPSTFEPQKDGDFVLRVFSEKPADSQELDDDITADLPEEVELDESQ
IDAGFKGLFRQLAGVEMEISASKLQTILNRIISKHKDLKTDGFGKEACRCMITLMDTTGT
GKLGLTEFHVLWEKIKRYLTVFRKFDLDKSGTMSSYEMRMALESAGFKLTNHLFQLIILR
YAKEDLNVDFDNFVNCLIRLETMFKTFKEMDTDVDGVVSFSFFQWISLTMFA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgatggagcaggttattgaacgtgtgtttgcctctggagtggctgctcgt
ttgaggagccagtgggaccgcaatgagggcatcggtcagaatgacaaggccctgaagttc
ttaggccaagactttgaatatctccggtcccacagtctgcagagcagacggctgtttgag
gatgatgcattccctgctcagatctcgtcgctgggcttcaaggagctggggtcacgctct
acaaagacacagggggtccgatggatgcgccccacggagttctgctctgaccctcacttc
atcgtagacggagccactcgcacagacgtctgccagggagctctgggtgactgttggctg
ctggcagcgattgcttcacttacactgaatgagactctactgcatcgggtggtgccccat
gggcagagcttccaccaacagtatgctgggatctttcacttccagttctggcagtttggg
gagtgggtggatgtggtgattgatgacaggctgccagtgaaggatgggaagctgctgttt
ctccactcagcagagggggctgagttctggagcgccctgctggagaaggcctacgcaaag
ctcaatggctgttacgaggccctctcagggggcagtacatcggaggggtttgaggacttc
acagggggcgtgacagagatgtttgagctgaagaaggcccatccagacctgttcagcata
atcagtagagcagtggagcgaggttccctgctgggatgctccatagatatctctggtgtt
tttgaaatggaggcgatgacattcaagaagctggtgaaaggccatgcctactctgtgaca
ggtgtggaggaggtggagtttaaaggaagtcccaccaagctcctgcggatcaggaacccc
tggggagaggtggagtggaccggagcctggagtgacaattcaagagagtgggctggagtt
gacccatcggtcagagctagattgtacaaccgtagcgaagatggcgagttctggatgtca
ttccgtgactttctgcgtgagttcagccgtttggaaatctgtaatctgacagcagacgcc
ctgcaggccagccaagtgaagaagtggagctcaacgctctaccctggagagtggaggaga
ggcagcactgcagggggctgcaggaactacccagcaacgttctggctcaaccctcaattc
aaagtggcccttcagcacccagacacagatggccaatcaggttgcagcttcctggtggcg
ctgatgcagaaggatcgtcgtcggcaacggcgtgaggggaaagacatggagaccattgga
ttcaccatctatgaggttccagaagagtttacaggtcgggccggggtgcatctaaagagg
gacttcttcctgacccacggctccagtgcccggtcagagctcttcatcaacctgagagaa
gtcagcacccgcttctgcctgccccagggagagtatatcgtcatcccctccaccttcgag
ccccagaaggacggagactttgtgctcagggtgttctctgaaaagccagctgactcacag
gaattggatgatgacatcacagctgatctgcctgaggaggtagagctggacgagagccag
attgatgcaggcttcaagggtctcttcagacagctcgctggagtggaaatggagatcagt
gcctccaagcttcagaccatcctaaacagaatcatcagcaagcataaggacctgaagaca
gacggctttggcaaggaggcgtgtcgttgcatgataactctcatggataccaccggcact
gggaagctgggcttgacagagttccatgtgctgtgggagaagatcaaacggtacctgact
gtgtttaggaagtttgacctggataaatctggcaccatgagctcctatgaaatgcggatg
gcactggaatcagctggcttcaagttgaccaaccacttgttccaactcatcatcctacgc
tacgcaaaggaagacctgaatgtggactttgataactttgtcaactgtctcatccgtctg
gagaccatgttcaagacctttaaagaaatggacactgatgtagatggggtggtttccttc
agcttcttccagtggatctccctcaccatgtttgcctag
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