Oncorhynchus kisutch (coho salmon): 109873800
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Entry
109873800 CDS
T09179
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109873800
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109873800
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Meth_synt_1
Motif
Other DBs
NCBI-GeneID:
109873800
NCBI-ProteinID:
XP_031664832
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All DBs
Position
LG29:complement(25847011..25852609)
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AA seq
565 aa
AA seq
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MTKCEKIANKMMQDVTQVVERDKGSQKQPEILNGKYQLKPYQLIGQNWLTLLHQNNLSGI
LADEMGLGKTIQAISFLASLYQEGNKGPHLLTVPASTLDNWVRELNLWCPRLKVLVYYGS
VEDRKYLRYDILNRQVDYNIIISTYALTTSNDNDRSLFRKLKLEYAVFDEGHMLKNMSSL
RYRHLMAINAKYRLLLTGTPVQNNLLELMSLLNFIMPDMFSSSTAQLANMFAMKSSEEQS
SFEMERISHAKLIMKPFILRRVKSEVLKQLPAKEEKVEFCAMSDQQQQLYNALMQKLKGS
TNGEKRELTNVMMQLRKMANHPLLHREHYTTTKLAAMSQLMLKEPTHCEADPALIKEDME
VMTDFELHRLCLQYPSVQDYQLNTDMLLDSGKLSLLTQILASLKNKGDRVVLFSQFTMML
DILEVFLKHLKHHYIRLDGSTPMSDRIVLIDQYNTELDIFVFLMSTKAGGLGINLTSANV
VILHDIDCNPYNDKQAEDRCHRVGQTRTVKVIKLISKDSIEDGMLRIGQKKLKLEQDMTA
SQSQDGDEDSIPEDMASLLKASLGL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtgtgagaaaatcgccaacaagatgatgcaggacgtgacccaagtggtagag
agggacaagggctcccagaaacagcctgagatcctcaacgggaaataccagttgaagcct
tatcagctcattggtcaaaattggctgaccctgctccatcagaacaacctgagtggaatc
cttgctgatgagatgggtttggggaagaccatccaggccatctcgtttctagccagcctg
taccaggagggcaataagggcccacatctcctcactgtacctgcctccacactggataat
tgggtgcgggagctgaatctgtggtgtcccaggctcaaagtcctggtgtattatgggtct
gtggaggatcgcaagtaccttcgatatgatattctcaacagacaggtcgactacaacatc
atcatttctacgtacgctctgaccaccagcaacgacaacgaccgcagcctgttccgaaag
ctcaaactggagtacgccgtgttcgatgagggccacatgctgaagaacatgagctcgctg
cgctaccgccacctcatggccatcaatgctaagtaccgtctgctgctgactgggactcca
gtgcagaacaacctcctggagctcatgtccctgctcaacttcatcatgcctgatatgttc
tccagcagcactgcacagctcgccaacatgtttgccatgaaatcatcagaggagcagagc
agctttgagatggagaggatctctcatgccaaactgatcatgaaacccttcatcctcaga
cgtgtcaagagtgaggtgctgaagcagctcccagccaaagaggagaaggtggaattctgt
gccatgagtgaccagcagcagcagctctacaatgccttaatgcagaagctcaagggatcc
accaatggagagaagcgagaactgaccaatgtgatgatgcagttgaggaagatggcaaat
cacccactgctgcaccgggagcattataccactaccaaactggctgctatgagtcaactc
atgctcaaggagccgacccactgtgaagcagacccagcactgatcaaggaggacatggag
gtcatgacagactttgagctgcatcgactttgtcttcagtacccgtccgtacaagactat
cagctgaacacagacatgctcctggactcagggaaactcagcctgctcacacagattctg
gcctctctcaaaaacaagggggatagagtggtgctcttcagccagttcaccatgatgctg
gacattctagaggtgttcctgaagcacttgaagcatcactacattcgactggatggatca
acgcccatgtctgacagaattgtgctgattgaccagtacaacacagagttggacatcttt
gtgttcttgatgtctactaaggctggtggcctgggcatcaacctgacctcagccaatgtg
gtcatcttgcacgacattgactgcaacccctacaatgataagcaggccgaggaccgctgt
caccgtgtcggacagacaaggactgtgaaggtgattaagctgatcagtaaggactctata
gaggatggcatgctccgcatcggtcagaagaaactcaagctggagcaggatatgactgct
tcccagtcccaggacggagatgaggactcgataccagaagacatggcctcccttctgaag
gcgtcactggggctgtga
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