Oncorhynchus kisutch (coho salmon): 109873819
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Entry
109873819 CDS
T09179
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109873819 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oki03400
]
109873819 (xrcc4)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
109873819 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
BRE1B
PigL_N
PAXX
NET2A_C
ZapB
IFP_35_N
Leu_zip
DUF3859
KASH_CCD
PTX3_N
FapA
ALMT
Motif
Other DBs
NCBI-GeneID:
109873819
NCBI-ProteinID:
XP_020321126
Ensembl:
ENSOKIG00005043127
UniProt:
A0A8C7N2U6
LinkDB
All DBs
Position
LG29:9108052..9139233
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AA seq
336 aa
AA seq
DB search
MHVTVREVCISSESETSYFLRVEWRGRDLGSGFLLLLTDGQNAWRGEVSEDAVREEAEEL
EMQTDRYIQDLQQALTGTGPSTDYSFTLTHNPGPMANMTLAYEKVQRDISFCLGSVLLGK
IPEPVEEVRALLTHGLERGTALQNHNHLLKEENHRLKQELQHINAELQRFVSGKETLESE
LYSRFTLVLNEKKAKIRSLQKNLTHLQETREEGESSSPGKGTKKTTGQTREEDEYEASTD
DAQLQPASIEPTQGTSRSRSPLDDSLNDIPDVAPSRKRRFRHLQPPDTVAKRTTSEPAQK
PRRDPLPSSRAAANKDQAPQHSSDVIPDAEDLFEDI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgacggtgcgtgaggtctgtatctcctcggagtcagagacttcctacttcctg
cgagtggagtggagggggcgggacttaggctctggcttcctgttactgctcaccgatgga
cagaatgcatggagaggagaggtatcagaggatgcagtgagggaggaggctgaggagttg
gagatgcagacagatcgttacatccaggacctccagcaggccctgactgggactggaccc
tctactgactacagcttcaccttgacccataaccccggcccaatggccaacatgaccctg
gcctacgagaaggtgcagagggacatctcgttctgcctgggttctgtgttgctgggtaag
attccagagccagtggaggaggttagagcgttactgactcacggtctagaacgtggaacc
gcactgcagaaccacaaccacttactaaaggaggagaaccacaggctcaaacaggagcta
caacacatcaatgcagagttgcagcggtttgtcagtgggaaggagacactcgagtcagag
ctgtactctcgcttcaccctggtgctgaatgagaagaaggccaagatacgcagtctgcag
aagaacctcacacacctgcaggagaccagggaagagggagagagcagcagtccagggaag
ggaacgaaaaagacgacaggacagaccagagaggaggatgaatatgaagcgagcactgat
gatgcacagttacagcctgcttctatagaacccacccaggggacttcgcgtagccgcagc
ccattggacgacagtctgaatgacatcccagacgtggcaccctcccgtaaacgccgcttc
cgccacctgcaacctcctgacaccgttgctaagagaacgacctcggagccagcgcagaaa
ccgaggagggaccccctgccatcatccagagcagcagccaataaggaccaggctccccag
cattctagtgatgtcattcctgatgctgaggacctgtttgaggacatctga
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