KEGG   Oncorhynchus kisutch (coho salmon): 109873819
Entry
109873819         CDS       T09179                                 
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
  KO
K10886  DNA-repair protein XRCC4
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    109873819 (xrcc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109873819 (xrcc4)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     109873819 (xrcc4)
SSDB
Motif
Pfam: XRCC4_CC XRCC4 XRCC4_C XLF BRE1B PigL_N PAXX NET2A_C ZapB IFP_35_N Leu_zip DUF3859 KASH_CCD PTX3_N FapA ALMT
Other DBs
NCBI-GeneID: 109873819
NCBI-ProteinID: XP_020321126
Ensembl: ENSOKIG00005043127
UniProt: A0A8C7N2U6
LinkDB
Position
LG29:9108052..9139233
AA seq 336 aa
MHVTVREVCISSESETSYFLRVEWRGRDLGSGFLLLLTDGQNAWRGEVSEDAVREEAEEL
EMQTDRYIQDLQQALTGTGPSTDYSFTLTHNPGPMANMTLAYEKVQRDISFCLGSVLLGK
IPEPVEEVRALLTHGLERGTALQNHNHLLKEENHRLKQELQHINAELQRFVSGKETLESE
LYSRFTLVLNEKKAKIRSLQKNLTHLQETREEGESSSPGKGTKKTTGQTREEDEYEASTD
DAQLQPASIEPTQGTSRSRSPLDDSLNDIPDVAPSRKRRFRHLQPPDTVAKRTTSEPAQK
PRRDPLPSSRAAANKDQAPQHSSDVIPDAEDLFEDI
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcatgtgacggtgcgtgaggtctgtatctcctcggagtcagagacttcctacttcctg
cgagtggagtggagggggcgggacttaggctctggcttcctgttactgctcaccgatgga
cagaatgcatggagaggagaggtatcagaggatgcagtgagggaggaggctgaggagttg
gagatgcagacagatcgttacatccaggacctccagcaggccctgactgggactggaccc
tctactgactacagcttcaccttgacccataaccccggcccaatggccaacatgaccctg
gcctacgagaaggtgcagagggacatctcgttctgcctgggttctgtgttgctgggtaag
attccagagccagtggaggaggttagagcgttactgactcacggtctagaacgtggaacc
gcactgcagaaccacaaccacttactaaaggaggagaaccacaggctcaaacaggagcta
caacacatcaatgcagagttgcagcggtttgtcagtgggaaggagacactcgagtcagag
ctgtactctcgcttcaccctggtgctgaatgagaagaaggccaagatacgcagtctgcag
aagaacctcacacacctgcaggagaccagggaagagggagagagcagcagtccagggaag
ggaacgaaaaagacgacaggacagaccagagaggaggatgaatatgaagcgagcactgat
gatgcacagttacagcctgcttctatagaacccacccaggggacttcgcgtagccgcagc
ccattggacgacagtctgaatgacatcccagacgtggcaccctcccgtaaacgccgcttc
cgccacctgcaacctcctgacaccgttgctaagagaacgacctcggagccagcgcagaaa
ccgaggagggaccccctgccatcatccagagcagcagccaataaggaccaggctccccag
cattctagtgatgtcattcctgatgctgaggacctgtttgaggacatctga

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