KEGG   Oncorhynchus kisutch (coho salmon): 109873928
Entry
109873928         CDS       T09179                                 
Name
(RefSeq) tripartite motif-containing protein 3 isoform X1
  KO
K11997  tripartite motif-containing protein 2/3
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109873928
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    109873928
SSDB
Motif
Pfam: NHL DUF4934 DUF5128 Filamin SGL zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_5 zf-RING_2 Invasin_D3 zf-C3HC4_4 RING_XB3-XBAT31 zf-ANAPC11 Mala_s_1-like Beta-prop_IFT122_1st Baculo_PEP_C YtkA Prok-RING_4 FTR1_4HB
Other DBs
NCBI-GeneID: 109873928
NCBI-ProteinID: XP_031665031
Ensembl: ENSOKIG00005026104
LinkDB
Position
LG29:complement(40499443..40554526)
AA seq 767 aa
MSVPMAQRETGSTSPVVRQIDKQFLVCSICLDHYHNPKVLPCLHTFCENCLQNYIPPESL
TLSCPVCRQTSILPEKGVSALQNNFFITNLMEVLQRDPECSRLEACSVLESVNAAAAGKP
LCCPKHEGKVMEFYCESCETAMCLECTKGEHREHVTVPLRDVLEQHKTQLKTQLDAIRNR
LPQLTAAIELVGEISKQLTDRKNEAVTEISSTFEELERALQLRKTALINDLENIYSAKQK
VLQTQLSSLLQGKDHIQSSCSFTEQALSHGSATEVLMVQKQMSERVSAMARHDFPERPHQ
NAHLDCQVETEGLRRSLQNLGVLITTAAVGHTSVATGEGLRHAATGQHVSVTVTTKDKDG
ELVRTGNAALRATVTPVADGSRVVTEPEVTDNKNGTYEVGYTLRSEGEFSFALSLYGQPL
RGSPFRLQAVKPSDALPSPDDVKRRLKSPGGTAGHVRQKAVRRPSSMFSIKKKENPIEDE
LIHRVGTRGREKGEFTNLQGISASSNGRVVVADSNNQCIQVFSNDGQFKMRFGVRGRSPG
QLQRPTGVTVDMNGDIIVADYDNRWVSIFSSDGKFKNKIGAGRLLGPKGVAVDRNGHIIA
VDNKACCVFIFQSNGKLVTKFGARGTSERQFAEKSGAHLNRSGPVFSPHFVAVNNKNEII
VTDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDTNGNVIVADWGNSRIQVFD
SAGSFLSYINTSADPLYGPQGLTLTSDGHVAVADSGNHCFKIYRYLQ
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgtctgttcccatggcgcagcgggagacaggcagcaccagcccggtggtccggcagata
gacaaacagttcctggtctgcagcatctgtctagaccactaccacaaccctaaagtcctg
ccctgcctgcacaccttctgtgagaattgcttacagaactacatccctccagaatctctg
acgttgtcgtgtcctgtgtgtcgacagacgtccatcctaccagagaaaggagtatccgct
ctacagaacaacttcttcatcactaacctcatggaggtcctccagagggatccagagtgt
tcgaggcttgaagcctgtagtgtcctggagtcagttaatgctgctgctgcaggaaaaccc
ctctgctgccctaaacacgagggcaaggtgatggagttctactgcgagtcatgtgagacc
gccatgtgtctggaatgtacaaagggagagcacagagagcatgtgaccgtccctctgagg
gatgtcctggagcagcacaaaacccaactgaagacacagctagacgccatacgcaataga
ctgccccagctaacagcagctatagagctggtaggggagatctccaagcagctgacagac
aggaagaacgaggcggtaacagagatcagcagtaccttcgaggagctggagagggcgcta
cagctcaggaagacagccctcatcaatgacctggagaacatatacagcgcaaagcagaag
gtgctccagacccagctctcctctctcctccaggggaaggaccacatccagagcagttgt
agttttactgaacaggccctgagccacggcagtgccacagaggtactgatggtgcaaaaa
cagatgagtgagcgggtttctgccatggcccgtcatgacttccctgaacggcctcaccag
aacgcacatctggactgtcaggtggagacagagggcctgcgtcgctccctccagaacctg
ggcgtcctcattactacggcagctgtaggccacacctccgtcgccaccggagaaggacta
cgccacgcagcaaccggacaacatgtcagcgtcaccgtgacgaccaaagacaaggacggc
gagctggtgcggacagggaacgcggcgctgagggccactgtcacaccagttgccgacgga
agccgcgtcgtcacggaaccggaggtgacggacaacaagaacgggacatacgaggtggga
tacacgctacggtccgagggggagttctccttcgctctgtccctctacggccagccgcta
cggggcagtcccttccggctgcaggcggttaagccctcggatgcgctgccgtctccggat
gacgtgaagaggaggctgaagagtcctggcgggacagcgggtcatgtcagacagaaggct
gtgaggagaccctccagcatgttcagcatcaaaaagaaggagaaccccatcgaggatgaa
ctcatccacagagtcggtacgcgagggagagagaagggtgagttcaccaacctgcagggg
atctcagcctccagcaacggcagagtggtggtagcagacagtaacaaccaatgtatacag
gtgttctccaatgacgggcaattcaaaatgaggtttggggtcagaggtcggtcgccgggg
caactgcagagacccacgggcgttaccgtggatatgaacggtgacatcatcgtggccgac
tacgacaaccgatgggtcagcatcttctcctccgatgggaagttcaagaataagatcggg
gcggggcgtctgttgggccctaagggcgtggcagtggacaggaacggacacatcatcgcc
gtggacaacaaggcgtgctgcgtcttcatcttccagtctaacgggaagctggtcaccaag
ttcggcgccagggggacgtccgagagacagtttgcagaaaaaagtggtgcccatttaaat
agatctggcccggtgttcagtccacactttgttgcggtgaacaacaagaatgaaatcatt
gtcacagatttccacaatcattctgtgaaggtgtacagtgcggacggtgagttcctgttt
aagtttggttcccatggcgaggggaacggccagttcaatgcccccaccggagttgccgtg
gataccaatgggaacgtcatcgtggccgactggggcaacagccgcatacaggtatttgac
agcgctggttccttcctgtcctatatcaacacatcagctgaccctctctacggcccccag
ggtctgaccctcacctctgatggacacgtggccgtagccgattctggaaaccactgcttc
aagatctaccgctacctacaatga

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