Oncorhynchus kisutch (coho salmon): 109873991
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Entry
109873991 CDS
T09179
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109873991
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109873991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
109873991
NCBI-ProteinID:
XP_020321317
Ensembl:
ENSOKIG00005048528
UniProt:
A0A8C7LBA6
LinkDB
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Position
LG29:11396279..11617776
Genome browser
AA seq
1629 aa
AA seq
DB search
MDIPLATPLLLALLLCSLSFVHGAMDSCYDDDEGVPSRCMPKFENAAFNRTIIASNVCGS
PPEDYCMQTSSTRSCHHCSVSDMGLSHNASLLTDFHTDEEPTWWQSQSMFYRVQHPNSVN
LTLRLGKAFEITYVRLKFYTSRPESFAIYKRTNQDGPWVPYQYYSASCSKTYGKNAKGYI
RPGDDERMALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSAVLQEWVTATDLLISLD
RLNTFGDEFFKDAKVLRSYFYAISDFSVGARCKCNGHGSECVLDEQGALVCDCQHHTAGV
DCQKCHPFYQDRPWARATGDSANQCMKCNCSGRADACVFDAEQYRSTGSGGRCVDCRDHT
DGPHCERCKENHYRRSPQDLCRPCDCNTIGSVSLQCGAEGMCTCRPSVTGEKCDTCQPGF
HSLSPGGCRSCDCETRGSVGICSTLDGGCHCKDSVEGQACDRCKPGSFNLQENNPAGCTS
CFCFGHSLACRSSNDHAAVNITSDFLEDPDRWSGQFSGGQEYPLLWKEGEVYLLPLSEED
LGFYRAPEKFLGNHLLSYGQLLSLTFTAEAQCLLPHSVTVLLEGSGITLSADLSPQPGLV
HQPGLAPQHTFTLRLHKEETRLRPFLSAFEFQSLLFNLTAFRISNAGGHNYTSQLSGVTL
ASAAHSSSPVTSSTPPAPWVEVCTCPPGFGGQFCELCAPGYTREVPNRGPLSPCVPCTCH
QHGPCHPETGVCKCADFTTGPTCERCLDGYYGNALIGTTNDCQTCPCPDRTSCAQIMEIG
DVVCTNCPSGQRGTRCELCEDGFHGDPLGRSGLVRQCERCDCNGNVDPNALGVCDHMTGR
CFKCLGHTEGDHCQRCRRGYYGDAMDRTMAGKCKPCDCSPAGTSGLLEDCDPQTGSCQCL
SHVTGRDCGQCSVGFFNLQPGVGCERCNCNPIGSSSAGCHPITGQCVCQPGLEGRLCSTC
RMGFFGFSSRGCRACNCDPMGSRSMQCHTNGTCPCRQGFVGYKCDQCELNYFHNRATHQC
EECPICYGLVKEEAGKLKARLQDLEKLLARFDCRNGSGRQHHVREYHVRQHHERGHQGED
SLPNALEDFLAIQEAKEAFVKQFALLEMSTHTLSAQLHTVATAMNCSASMEEEQEEGWRT
LCRTLADSVSVVRSAQNQLTQATLDLDNMVIPFKMTPVPNRWNSAVNESEILMKSHTEMA
GHIESIATKAFMASNQTYSLLMDLLEDNSIEEYISNLTEQMADMQQMKENLTAQVNETLA
IQLSLEEESAEIMVAFVNLTSSILELSKKMPNPTSGTNQSDPSLRSGANQTEGVELSNRT
SELAFHVQSKEELASKIREEMEPRIQTAHKNLAAVQDMHKLTVQAQGSKVIALSSVVTGK
EVESKAITLRRELEDMQREWPQRQAQTKAALKRERLLREKVLEDVSKKVNQTKRVLRPAL
ESATLSNTTAQEAKHTANALSKEAKATLTQGKHTRTLSAQLSSSVDITLQQLAEQENHTV
QAQTQTNAEPVESLASVKVNIQAAQLQLEAYSLTLTQLVNKIDGGMALERFERILSETAV
RLSVLRGSVESPALNGKIQTLRSAAQDQNSQLTHLEQDLQEIRQERDSLKDIALHLPQTC
PQASGIEGH
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggatatcccactggccaccccactcctcctcgccctccttctctgctccctctccttc
gttcacggggccatggactcctgctacgatgacgacgagggtgtccctagccgttgcatg
cccaagttcgagaacgcagcctttaaccgcacgatcattgcttccaatgtgtgcggttca
ccgccagaggattactgcatgcagacgagctcgacgcgctcctgccaccactgtagtgtg
tcggacatgggcctcagccacaacgccagcctgctgacggacttccacacggacgaggaa
cccacctggtggcagagccagtccatgttctacagagtccagcaccctaactctgttaat
ctcaccctgcgcctcggtaaggcctttgagatcacctacgtgcggctcaagttctacacc
agccgaccggagagctttgccatctacaagcggacaaatcaggatggaccatgggtgccc
taccagtactacagcgcctcctgtagcaagacctacgggaagaacgccaagggatatatc
cgcccgggtgacgacgagaggatggcattgtgcacagacgagttcagtgacatctcccct
ttgactgggggcaacgtggccttctctactttggagggacgacccagcgcatataacttt
gaccagagcgccgtgctgcaggagtgggtgacagccaccgacctgctgatctctctggac
aggctgaacactttcggagacgagttcttcaaggacgccaaggtgctgcgatcctacttc
tacgccatctctgatttctctgtgggagccaggtgtaagtgtaatggccatggcagtgag
tgtgtgttggacgagcagggggctctggtgtgtgactgccagcatcacacggccggggtg
gactgccagaaatgtcacccgttctaccaggacaggccatgggccagggccaccggagac
tctgccaaccagtgtatgaagtgtaactgcagtgggcgagcggatgcatgtgtgttcgat
gcggagcagtaccgtagcacagggagtggggggcgctgtgtggactgtagggaccacact
gacggaccgcactgtgaacgctgcaaagagaaccactaccgacggtcaccacaggacctc
tgccgcccctgcgactgtaacaccataggttctgtgagtctgcagtgtggtgcagagggg
atgtgtacgtgcagacccagtgtgacgggggagaagtgtgatacctgtcaacccggcttc
cactcgctcagccctggtggctgcaggtcgtgtgactgtgaaaccaggggcagtgttggc
atctgctctacgctggacggcggttgtcactgcaaggacagcgtggagggacaggcgtgt
gacaggtgcaagccaggctccttcaacctgcaggagaacaacccagctggctgcacctca
tgtttctgcttcggacactcattggcctgcagatcctccaatgaccatgcagctgtcaac
atcacttctgacttccttgaagacccagaccgctggtctggacagttctctgggggacag
gagtaccctctgctgtggaaggaaggtgaggtctacctgctaccactcagtgaggaagac
ctgggcttctacagagctccagagaagttcctggggaaccatctcctgagctatggccag
ctcctctccctgaccttcacggccgaggcccagtgcctcctccctcacagtgtcactgtg
cttctggaaggatctggaatcaccctgtcagctgacctttcaccccaacctggacttgtc
caccagccaggcctcgctccccagcacaccttcactctcagacttcacaaggaggagaca
agactgaggccttttctgtctgccttcgagttccaaagtcttctcttcaacctcactgca
ttcaggatcagcaacgcaggaggacacaactacacgtcccaactctcaggggtaaccctg
gcctccgctgcacactcctccagccctgttacatcctctaccccccctgctccctgggtt
gaggtgtgtacgtgccccccggggtttgggggtcagttctgtgagctctgtgccccaggc
tacaccagagaggtccctaacagaggacccctgtcaccctgtgtgccctgcacctgccac
cagcacggaccctgccaccctgagacaggtgtgtgtaagtgtgcagatttcaccacagga
ccaacctgcgagcgctgcctggatggttactatggcaacgcgttgattggcacgaccaac
gactgtcaaacttgcccctgcccggaccgcaccagctgtgctcaaattatggagattggg
gacgtggtctgtaccaactgcccttcaggacagaggggaaccaggtgtgagttgtgtgag
gacggtttccacggcgaccccctgggccgttctgggctggttcggcagtgcgagcggtgc
gactgtaacggtaacgtggaccccaacgcgctgggcgtgtgtgatcacatgacgggccgc
tgcttcaagtgtctgggacacaccgagggagaccactgtcaacgttgtcgacgcggttac
tatggagatgccatggaccggacgatggccgggaagtgcaaaccctgcgactgcagtcct
gcagggacttctgggttgttggaggactgtgacccccagaccggaagttgtcagtgcctt
agtcatgtgacagggcgagactgtggccagtgctcagtcggcttcttcaacctgcagcct
ggagtaggctgtgagaggtgcaactgtaaccccattggctcgtcttccgcggggtgccac
ccaatcacagggcagtgtgtgtgtcagccgggactggaggggcggctgtgcagcacctgt
cgtatgggcttctttggtttctcctcacgaggctgcagagcctgtaactgcgaccctatg
ggttcccgctccatgcagtgccacaccaacggcacctgtccctgccgccagggcttcgtg
gggtacaagtgtgaccagtgtgagctcaactacttccacaacagagccacgcaccagtgt
gaagagtgccccatctgctacgggctagtcaaggaggaggcagggaagctgaaggcacgg
ctgcaggatttggagaagctcctggcacgcttcgactgccggaatggctccggacgccag
catcacgtgcgcgagtatcacgtgcgccagcatcacgagcgtggccaccagggggaggac
agcctgcccaatgcgctggaggacttcctggctatccaagaggcaaaagaagcctttgtc
aaacagtttgcactcctggagatgtctacacacactctctcagctcagctgcacactgtt
gccaccgctatgaactgtagcgccagcatggaggaagagcaggaggaagggtggagaaca
ttgtgcaggacccttgctgactctgtgtctgtggttagaagtgcacagaaccagctgacg
caggcaactctggacctggacaacatggtcatccctttcaagatgacacctgtgcccaac
cgctggaactctgcggtgaacgaatcagagatacttatgaaaagtcacacagagatggct
ggtcatatagagtctatagcgaccaaagctttcatggcctccaaccagacctactctctc
ctgatggacctactggaggacaactctattgaggaatacatcagcaacctcacggagcaa
atggcagacatgcagcagatgaaggagaatttgacggcccaggtgaatgaaactctagcc
attcagctgtctctggaggaggagtctgctgagatcatggttgcctttgttaacctcaca
tcctccatattggagctgtccaaaaagatgcccaaccccacatcaggaaccaaccaatca
gaccccagcctaagatcgggtgccaaccaaacagagggtgttgagctgagcaacaggaca
tctgagctggcgttccatgtccagtctaaagaagaactggccagtaagatcagagaggag
atggagcctcgaatacagaccgcccacaagaaccttgctgccgtacaggacatgcacaag
ctgacagttcaagcccaggggtcaaaggtcattgccctgtcatcggtggtgacagggaag
gaagtggagtcaaaggccattaccctgcggagagaactggaagacatgcagagagagtgg
cctcaaaggcaggcccagacgaaggctgctctgaagagggagaggctgctgagggagaag
gttctggaagacgtcagtaagaaggtgaaccagaccaagcgagtccttaggcctgccttg
gagagcgctaccctctccaacactaccgctcaagaagcaaaacacaccgcaaatgctctg
tctaaagaggccaaggccaccctaacccagggcaagcacacgaggacattgtctgcccag
ctcagctcatctgtagacataaccctgcagcagctggctgagcaggagaaccacactgtt
caggcacaaacccagacgaacgcagagcctgtagagtctctggccagtgtaaaggtgaac
atccaggcagctcagcttcagcttgaggcctactccctcacactcacccagctcgtcaat
aaaatagatgggggcatggcgctggaacggtttgaacgtatactgagtgagacggcggtg
aggttgagtgttctgcgtggcagcgtggagagcccggccctgaacgggaagatccagacc
ctgcgatcagccgcccaggaccagaacagccagctgacccacctggaacaggacctgcag
gagatcagacaggagagagacagtctgaaggacattgccctgcacctgccccagacctgc
cctcaggcctcggggatagagggacactag
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