Oncorhynchus kisutch (coho salmon): 109874045
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Entry
109874045 CDS
T09179
Name
(RefSeq) guanine nucleotide exchange factor VAV2 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04517
IgSF CAM signaling
oki04519
Cadherin signaling
oki04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109874045
04519 Cadherin signaling
109874045
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109874045
09142 Cell motility
04810 Regulation of actin cytoskeleton
109874045
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
DUF7145
SH2_2
C1_2
PLU-1
PH_10
CDC24
DH_Alsin
Nup88
Motif
Other DBs
NCBI-GeneID:
109874045
NCBI-ProteinID:
XP_031664672
Ensembl:
ENSOKIG00005042074
LinkDB
All DBs
Position
LG29:23819157..24059125
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AA seq
883 aa
AA seq
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MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
VQIKGVRPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEDDKRNCCLVEIQETEAKYYKTLEDIEKNYMIPLKQVLSPQDMGA
IFVNLEDVIKVHFALLRAIDLNMVSGGNGLGKIFIDFKERLLIYGQYCSHMETAQKTLDE
LITTREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSTDRPDRQQL
KEALEAMQDLAMYINEVKRDNETLKKISEFQNSIENLQQVKLEEYGRPKIDGELKVSSIV
NRTKQDRYIFLFDKVVIVCKRKGYCYELKEIIELQSYKMSDDPMNNRDVKKSSGKMWSYG
FYLIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPEKATANQHIFQMHTFEKNTNCR
ACKMLLRGIFYQGYYCSRCGTGAHKECLECITICKINPLDADLGLPSSGPKMVAVRNYHG
TPVPPGKTPLSFQTGDFIELLKGEPDTTWWEGKLIQTQKSGFFPNNCVKPCLDPKPLFQS
FPSRQPSRETDYYGYPWFAGNMERTQADNLLKSHSSGTYLIRERTAEAERFAISIKFNEE
VKHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSKERGPAS
RASTRSPAAIGASYNFSFLSPQGLNFSSQSSAPFWSVFTPRVVSTAVARYNFAARDMREL
SLREGDIVKIYSKIGGDQGWWKGEANDRIGWFPSTYVDEEGVQ
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtggaggcaatgcgggcggtggttgatagactgcaaggttttgcccccaaac
caccgggtcgtgtggccttctgcagctgtgttcgacttggcacaggcgctacgagacgga
gtgctcttgtgccagatgttgcacaacctgtcaccggggtctgtggacctaaaggagatc
aacttcagaccccagatgtcccagtttctctgtctgaagaacatccggacgttcctcaag
gtgtgccacgacaagtttggcctgcgtaacagtgagctgtttgacccctttgacctgttc
gatgtcagggatttcggcaaggtgatctcagccctgtccaggatctcccaccacagcatt
gtgcagatcaaaggcgtgaggccttttccttcggaggacactgctctgaatgaggatgac
gtgtaccggagtcttgaggagctggcagatgagcatgacgtgggggaggatgacatctac
gactgcgttccctgtgaggatgatggagatgacatctacgaggacatcatcaaggtggaa
gtacggcaacccatgatcagatacatgcagaaaatgggcatgacagaagacgacaagaga
aactgctgcttagtggagatccaggagactgaggccaagtactacaagacgctggaggac
attgagaagaattatatgattcccctgaagcaagtactaagtccacaagacatgggggcc
atctttgtaaatctggaggatgtgattaaggtccactttgctctgctgagggccatcgac
ctcaacatggtgagcggaggcaacggtctggggaagatcttcatagacttcaaggaaagg
ttgctgatctacggccagtactgcagccacatggaaaccgctcagaagacactggatgag
ctcatcaccacgcgggaggacgtcaagatgaaagtagaggagtgcactatgaaggtgcag
gaggggaagttcaagctccaggacctgttggtcgtgcccatgcagagagtactaaagtac
cacctcctactcaaggagctggtgagtcattcaactgaccgacctgatagacagcagctg
aaggaggcgttggaggccatgcaggacttggctatgtacatcaatgaagtgaagagagac
aacgagaccttgaagaagattagtgaattccagaactccatcgagaaccttcagcaggtc
aaactggaggagtatggcagaccaaagatagatggagagctcaaggtgtcctccatagtc
aaccgaacaaagcaggaccggtacatattcctgtttgataaagtggtcattgtgtgcaag
cggaaaggctactgctatgaactgaaagagatcattgagctgcagtcgtacaaaatgtct
gacgaccccatgaacaacagggacgtgaagaagtccagtggaaaaatgtggtcctatggc
ttctacctgatccacctgcaaggcaagcagggctttcagttcttctgtaaaacagaggac
accaagaggaaatggatggagcagtttgagatggccatgtcaaacatcaagccggagaaa
gccacggccaatcagcacatcttccagatgcacacgtttgagaagaacaccaactgccga
gcttgcaagatgctgctgagggggatcttctaccaggggtactactgttcccgctgtggg
actggagctcataaagagtgtctagagtgcatcaccatctgcaaaatcaatccactcgac
gcggaccttggactaccgtcatcaggccctaagatggtggcagtaaggaactatcatggg
acgcctgttcctccggggaagactccactctccttccagacaggggacttcatcgagctg
ctgaaaggggaacctgacaccacctggtgggagggaaagcttatccaaacccagaagagt
ggcttctttcctaacaactgtgtaaagccttgtttggaccccaagcctttgttccagtcc
ttccccagccggcagccctcaagggaaacagactactatggatacccctggtttgctggc
aacatggagcggacacaggctgacaacctgttgaagtcccacagcagtggaacatacctg
atcagagagaggactgctgaggcagagaggttcgccatcagcatcaagttcaatgaggaa
gtgaagcacattaaagtaattgagaaagacagctggatccacatcactgaggctaagaag
tttgagagtctactggagttggtggagtactatcagtctcattcgttgaaggagagtttc
aagctgctagacacgactttacgatatccctacaaatctaaagaacgggggccggcgtcg
cgggccagcacccgctctccagcagccattggcgcttcctacaacttctccttcctcagt
cctcagggtctaaacttctcctctcagagctcagcccccttctggtcagtattcacgccg
agggtggtcagcacagcggtggccaggtacaactttgcagcacgggacatgagagagctg
tctctcagagaaggggacatcgtcaagatctacagcaagattggaggagaccaggggtgg
tggaagggagaggccaatgacaggattggctggtttccctcaacgtacgttgacgaagaa
ggagttcagtga
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