Oncorhynchus kisutch (coho salmon): 109874101
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Entry
109874101 CDS
T09179
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03440
Homologous recombination
oki04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109874101
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109874101
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109874101
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109874101
03036 Chromosome and associated proteins [BR:
oki03036
]
109874101
03400 DNA repair and recombination proteins [BR:
oki03400
]
109874101
Peptidases and inhibitors [BR:
oki01002
]
Metallo peptidases
Family M67
109874101
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109874101
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
109874101
BRISC complex
109874101
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
109874101
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
109874101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
Motif
Other DBs
NCBI-GeneID:
109874101
NCBI-ProteinID:
XP_020321464
Ensembl:
ENSOKIG00005046419
LinkDB
All DBs
Position
LG29:33562616..33568676
Genome browser
AA seq
261 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRGSDKRKDRV
EISPEQLSSAATEADYRLADMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGF
VGLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVE
LPRILCQEEQDTYRKIHSLTHLDPITKIHNGSVFTKNLCSQMSAVSGSLLQWLEDCLEQN
RKSIIELQLEKERLTQELATM
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgcagttcacctcgaatcagatgcatttttggtttgcatgaatcatgca
ttaagtaccgagaaggaggaagtcatgggactctgcatcggagaggtggacaccaaccgc
atcgtccacattcactctgttattattctgcgaggctcagacaagaggaaggatcgcgtg
gaaatctcgcctgagcagctatcttcagctgctaccgaagctgactacaggttggctgat
atgactggacggccgatgcgtgtagttggttggtaccactctcacccccacatcactgtg
tggccatcacatgtggatgtaaggacacaggccatgtaccaaatgatggaccagggcttt
gttgggctgatattctcctgtttcattgaggataagaacacaaaaactggtcgagttctc
tacacctgcttccagtctgtacaagcccagaaaggctctgagtacgagagaatcgagatc
ccaattcatgtggtcccgcatgaggccattgggaaagtgtgccttgaatcagcagtggag
ctcccaagaatcctctgccaggaagagcaggatacctacagaaagattcacagcttaact
cacctggatccgatcacgaagatacacaatggctcagtgttcactaagaacctgtgcagt
cagatgtctgctgtgagtggttccctgctgcagtggctggaggactgtttggagcagaac
agaaagagcatcattgagctgcagctggagaaggagagactaactcaggagctggcaacc
atgtga
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