Oncorhynchus kisutch (coho salmon): 109874284
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Entry
109874284 CDS
T09179
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109874284
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109874284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109874284
03009 Ribosome biogenesis [BR:
oki03009
]
109874284
04131 Membrane trafficking [BR:
oki04131
]
109874284
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109874284
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109874284
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109874284
Membrane trafficking [BR:
oki04131
]
SNARE
SNARE associated proteins
Others
109874284
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109874284
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109874284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
IstB_IS21
NB-ARC
AAA_lid_PRS2_C
TsaE
AAA_24
ResIII
nSTAND_NTPase5
NACHT
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
109874284
NCBI-ProteinID:
XP_020321720
Ensembl:
ENSOKIG00005045627
LinkDB
All DBs
Position
LG29:complement(14466047..14518740)
Genome browser
AA seq
805 aa
AA seq
DB search
MASGGESKNDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQAKMDELQLFRGDTVLMKG
KKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD
TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDTV
IHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI
LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII
FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG
RFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEAALQ
AIRKKMDLIDLEDETIDAEVMSSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIGG
LEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFIS
IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVI
NQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILNANL
RKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERERQINPLAME
VEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSSAPGA
GPSQGSAGGSGGTVFNEDNDDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaggagaatcgaaaaatgatctatccacagcgattttaaagcagaagacc
aggcccaaccggttggttgtggatgaatctctcaatgaggacaacagtgtggtttctctg
tctcaggcaaagatggatgagttgcagctgttcaggggagacacagtgctgatgaaagga
aagaagagacgggagaccgtatgcatcgtgctctctgacgacacctgctccgacgagaag
gtccgcatgaacagagtggtccgcaacaacctgagagtccgcctgggagatgtcatcagt
attcagccctgcccagatgtgaagtacgggaaacggatccatgttctgcccatcgatgac
actgtagaggggatcacagggaacctgtttgaggtctacctcaagccctacttcctggag
gcctacaggcccatcaggaaaggggacattttcctggtgaggggaggcatgcgtgcggtg
gagttcaaggtagtggagacggatcccaacccctactgcatcgtggccccagacactgtc
atccactgtgagggcgagcccatcaaacgagaggatgaggaggagtctctgaatgaggtt
ggctatgatgacattgggggtgtgaggaagcagctggcccagattaaggaaatggtggag
ctgcccctgagacacccagcactgttcaaggccatcggcgtcaagcctccaaggggtatc
ctgctgtatggaccccctggaacaggaaagacactgattgcacgtgccgtggccaacgag
accggagccttctttttccttatcaatgggcctgagatcatgagtaaattggctggagag
tctgagagtaacctgaggaaggcctttgaggaggctgagaagaatgcccccgccatcatc
ttcattgacgagctggacgccattgcaccaaaaagagaaaagacacacggtgaggtggag
aggcgcattgtgtcccagctcctcacactcatggatggcctaaagcagcgcgctcacgtc
atcgtcatggcagccaccaacaggcccaacagcattgaccccgccctgaggagatttggg
cgttttgacagggaggtggacatcggcatccctgatgccacaggcagactggagatcctc
cagatacacaccaagaacatgaaactgtccgacgacgtggacctcgagcaggttgccaat
cagactcacggccatgtgggtgctgacctggccgctctgtgctctgaagccgccctgcag
gccatcaggaagaagatggatctcatcgacctggaggacgaaactatcgacgccgaggtc
atgagctccctggctgtcaccatggatgacttcagatgggctctaagccagagcaaccct
tcagccctgagagagacggtggttgaggtgcccaacatcagctgggaggacatcggaggt
ctggaggacgtcaagagggaactccaggagcttgtacagtacccagtggagcacccagac
aagttcttgaagttcggcatgaccccgtccaagggcgtgctgttctacgggcccccaggt
tgtggtaagaccctgctggccaaagctatcgccaacgagtgccaggccaacttcatctcc
atcaaaggtcctgagctgctcaccatgtggttcggagagtccgaggccaacgtccgcgag
atcttcgacaaggctcgccaggccgccccctgtgtgcttttctttgacgagctggactcc
atcgccaaggcacgtggcggcaacgtgggtgatggtggcggagcggccgaccgtgtcatc
aaccagatcctgacagaaatggatggcatgtccagcaagaagaacgtcttcatcatcggt
gccaccaacaggcctgatatcatcgacccggccatcctgaggcccggaagactggaccag
ctcatctacatccccctgccagatgagaagtcccgcatcaacatcctaaacgccaacctc
aggaagtcacccatcgccaaggatgtggacttggatttcctggccaagatgaccaatggt
ttctctggcgctgacctgacagagatctgccagagggcctgtaagatggccatcagggag
tccattgagaatgagatcaggagggagagagaacgtcagatcaaccccttagccatggag
gttgaggaggacgaccctgtgccagagatccgtaaagaccactttgaggaggctatgcgt
ttcgcccgccgctcagtcagcgacaacgacatccgcaaatatgagatgttcgcacagaca
ttacagcagagcagaggcttcggcagcttccggttccccactagctctgcgccaggcgct
gggcccagccagggctctgctggtggcagcggtggtacagtcttcaatgaggacaacgac
gacgacctctatggttaa
DBGET
integrated database retrieval system
