Oncorhynchus kisutch (coho salmon): 109874286
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Entry
109874286 CDS
T09179
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109874286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109874286
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
109874286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
109874286
NCBI-ProteinID:
XP_020321722
Ensembl:
ENSOKIG00005049797
LinkDB
All DBs
Position
LG29:complement(31049913..31071721)
Genome browser
AA seq
1274 aa
AA seq
DB search
MDELDHMLTDPLDSGEGSDGRITEECMLGNCQVSLPEDLLEDPEIFFSVLSESTWSEVLT
DDQRQHLRQLLPHFQEDNTCEQDSTISKLFNKQNFCFGNPLHLAQKLFQDGHFNPEVVKY
RQLCAKSQKKRQLNSLQQYYHKLLKQILVSRKELLELAVRSGPDIAVNRKYPTQTHGEVQ
EQRVRGRVCRILREVKTECGDSNASSDDDDTASWLPTPQSPSSPTPTVSVRVLPSLSTQD
MKTTDKQELGEKDMRAMLRRHREKRRRQPDHPDLMTSDIRLGDMMSRVNIGRKGSMMTLF
DLALPKRKMREERRKKKMRTIKVESEDPCEALMPSEAPAPSVNITAALPETPVTPLPSVK
EEPMEEVQNSPVMVEEIAVSFFNLLENILKLDGLASTTMLEEKVQQWQTSPASSLNPWFS
SASCWSEMVLPALHFLAGETKVGMLVLPSGFTPYVAFRENSQRWKWIGPSQDGEKDLSAL
CQLWVDSKDLVVVKTECEELTEMTSPTPRVSWTDFVVRPSTGDERHVFQVQEQQRYDQPH
KAFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNG
EGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRD
RGQEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKEGGGKTSGGLEASDVGGPMSPT
PTTPTTSTPGTPKSPLAPVATTPTKAGIPDSVKTSPGVLLVSPPPMPQLGTLLSSSQSGP
QVSQPATSQHTARVVGHQSGTLPQVRVVSSQTAGGQHATLVHQTPHQIRVPVTMGTKGIT
QAVVSLPLRTQSAGSPIQVQASRGQTTLSVSGLTTAVTVLKPQTASPGGPAHNPTSPAVR
QGVTSQNIIKQVAITGQLGIKSQGRPGLPITTTNLRIQGKDVLRLPPSSITTDSKGQTVL
RITPDMMATLTKSPLTTVKLTPDMLGTATTKSISATLHVAPPHSTSSPASSSGEVRTSKA
SAGTTTLLKAAGDTIRLMPTLAVTMAEQKTRTFSTVSSSDSKSGTTIRIMPGLGVIPQKQ
GQTITMTTTTGSKPVSTGAATVTIATSGLAGAKGVTVGSSASGSLTLGTATATVRQVPVT
ATVVSTQPGKLPARFTVPLSVLSQPLKSKSVMTTPILKGNLSTNISSLGRNIILTTMPAG
TKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVPAQQLQQRSAAGSPKSMSTVVVTTA
PSPKRAPDPPPPAQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacttgatcacatgctgaccgaccccctagactcaggggagggcagtgatggg
cgcatcactgaagagtgcatgttgggaaactgtcaagtgagtcttccagaagacctgctt
gaggatcctgaaatattcttctctgtgctgagtgaaagcacttggtctgaagtactgaca
gatgaccagaggcagcatctccgtcaactgttaccacactttcaagaagacaacacttgt
gagcaggacagcaccatcagcaaactcttcaacaaacagaacttctgcttcggaaacccc
ttgcaccttgcacagaaactgttccaagatggccatttcaatccagaagtggttaagtac
agacaactgtgtgccaagtcccagaaaaaacgccagctgaactcgttgcagcagtactac
cacaaactccttaaacagatcctggtctctagaaaggaactgctagagttggctgtccgc
agtggccctgacattgcggtgaacagaaagtatcccacccagacacatggtgaggtgcag
gaacagagggtcagaggaagagtgtgccggatactgagggaagttaaaactgagtgtgga
gacagcaatgcctcatctgacgatgatgatacagcctcttggctgccaacacctcaatct
ccttcctctccaacgcccacagtctctgtcagggttttgcccagtctctccacccaggac
atgaagaccaccgataagcaagaactgggagagaaggacatgagagccatgctacggaga
catagagagaagaggagacgacaaccggatcatccagacttgatgacttctgacatccgc
ctgggtgacatgatgtctagagtgaacataggtcgtaaaggctccatgatgacactgttt
gacctggctctgcccaagaggaagatgagggaggagaggagaaagaagaagatgaggaca
attaaagtggagtctgaggatccctgtgaggctctgatgccttcagaagccccagctcca
tcagttaacatcacagctgctctgcctgagaccccagtcactccactgcccagtgtcaag
gaagagccgatggaggaggtgcagaacagccctgtcatggtggaggagatcgcagtgagc
ttcttcaacctgctggagaacatcctaaaactagacggcctcgccagcaccaccatgttg
gaggagaaggtccaacagtggcagacatctccagctagttccctgaacccctggttctcc
tcggcctcctgctggtcagagatggtgctgccggccctgcacttcctagctggggagact
aaagtcggtatgttggttcttcccagtggcttcactccctatgtggcgttcagggaaaac
tcacagcgatggaaatggattggtcccagtcaggatggagagaaggatttgagtgctctg
tgtcagctgtgggtcgactccaaggacttggttgtggtcaagacagaatgtgaagaacta
acagagatgacttctcccacccctagagtcagttggactgacttcgtggtgcggcccagc
acaggagacgagaggcatgttttccaagtgcaggagcagcagcggtatgaccagccacac
aaagccttcaccttcagaatgcatggctttgagtctgtggtggggcctgttaagggggtc
tttgacaaggagatgtctctcaacaaagccagagaacacactctgctgcgctccgaccgc
ccagcttatgtcaccatcctctccttggtgcgggacgcagcagcccggctgcccaacgga
gaggggaccagagctgagatctgtgagctgctcaaggactcgcaattcctggcaccagat
gtcaccagtgctcaggtgaacacggttgtgagtggggctctggacaggctgcactatgag
aaggacccttgtgtgaagtatgacatcggacgcaagctgtggatctacctgcaccgcgac
cgcggtcaggaggagtttgagaggattcaccaggctcaagctgctgctgccaaggccaga
aaggctctgcagcagaaacctaaacctgcgtctaagcctaagtctggaagtaaggagggg
ggtggtaagacctctggaggcctggaagcaagtgatgtggggggtcccatgtccccaact
ccgaccacccccactacgagcacgcctggaacccccaaatcacccctcgcccctgtagcc
acaacccccaccaaagctgggatcccagattcagtcaagaccagtcctggtgttctattg
gtgtctcctccccccatgccccagctggggaccctgttgtccagcagccagtctggcccc
caggtctctcagccagctacctcccaacacacagccagggtagtgggccaccagtcaggc
actctcccacaggtacgagtggtttcttcccagacagcaggaggacagcatgccacgctg
gtgcaccaaacccctcatcaaatcagagtgccagtcaccatgggaaccaagggcatcaca
caggctgtggtgtcattaccactgaggacccagtctgctggtagccccatccaggtgcag
gcatccagagggcagacaaccctgtcagtgtcaggcctgaccactgctgttactgtactc
aaacctcagactgcatcccctggcggcccagcacacaaccctacctcccccgctgtccga
cagggagtcaccagccagaacatcatcaaacaggtggctatcacaggccagttgggtata
aagtctcaaggtagaccgggtcttccaataacgactaccaatcttcgcatccagggcaag
gatgtgctccgcctgcccccctcctccatcaccacagactctaaaggacagacggtgctg
cggatcactcctgacatgatggccaccctaactaagtcccctctcaccaccgtcaaactc
acccccgacatgttaggcactgccactactaagagcatatctgctactctccatgtagcc
ccaccccactccacctccagcccagcctcctcctcgggtgaagtccggaccagcaaggcc
tctgctggcaccaccaccctgttgaaggctgcaggggacactatccgcctgatgcccacc
ctagcagtcactatggccgagcagaagaccagaaccttctccaccgtctcctcgtctgac
tcgaagagtggcaccaccatacggatcatgcccggcctcggggtcatcccacagaaacag
ggtcaaaccatcaccatgacaaccaccactggcagcaaaccagtctccactggagccgcc
actgtcaccatagccaccagcggactggccggagctaaaggggtgacggtgggctcttct
gcctcaggctccctgactctgggaacagccacagctactgtccgccaggtccccgtcaca
gccacagtggtgtccacacaaccagggaagttaccagctcggttcacagtgcctctgtct
gtcctcagccaaccactgaaaagtaagagtgtgatgaccacgcccatactgaaaggaaac
ctcagtaccaatatcagcagtctcggcaggaacatcatcctcaccaccatgcctgccggt
accaagctgatagctgggaacaagccagtcagctttgtcacggctcaacagttacagcag
ctgcagcagcagggacaggccacacaggtgcggatccagacggtgccagcccagcagctc
cagcagcgctccgcagcaggctcccccaagtcaatgtccactgtcgtagtcaccaccgca
ccctcacccaaacgggccccggacccgccaccaccagcacagtga
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