Oncorhynchus kisutch (coho salmon): 109874290
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Entry
109874290 CDS
T09179
Name
(RefSeq) GRB10-interacting GYF protein 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109874290
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109874290
Surveillance factors
Other surveillance factors
109874290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
109874290
NCBI-ProteinID:
XP_020321731
Ensembl:
ENSOKIG00005046939
LinkDB
All DBs
Position
LG29:complement(34325115..34355928)
Genome browser
AA seq
1058 aa
AA seq
DB search
MTAETLNFGPECCLGEDNGRCISNLNLRLRALSRGRSVTSPPPSPALPKSKLADYRYGRE
EMLALYIKDDKPPEDMTQDKEFAAILQDEPVQPLALEPLTEEEQRNFSMSVNSVAVLRLM
GKGGGAAPAVVAKGRGGGIRGRGRGEGAFYQRAPGGPDDGEVGFGRGREMLRSQSWDDRA
ERPKFEKPIRRAEVVRPGFEEAGPLGRKDSWRADSGNWRTLREEEEEAAAAGGGGGGEQP
AWRVAGTRRDDGGPRSAGWRDHGGRRKFEFDFRDSEGPRREDDRDGLPEWCTDEEDGEMG
TFDSSGAFMCIKKGSKGTITEEDLEFEALEEDENGQEVKDNGQEGKDNYKDNYTDGDECE
AACEGVVKYRTPSPPAVSAPPSSDPLPAPCAPEAPMAPISHPSKTNHVPTQGSSPPGSGA
QLSPDPSSSTTTFSSLMPPPSFGSLLPSTGGEVEEDEGMKHLQQEAEKMVASLQDTSLEE
ECFTQALQESHNITSQSLTHPAPHSHTHTHTAGHTHSHSAHRDCALPLSHEAAMKWFYKD
PQAEIQGPFSTVEMCEWFQAGYFSMTLLVKRGCDEGFQPLGDVIKMWGRVPFSPGPSPPP
LLVRQPPPPRGSSGNMDQELLKKQLEQAATAALYQQLQIRFQHMNRSGESSMMNRSMSVP
DNGSMWDMRTSASQQSGGEANLWDLTMSHSTQGPSLEQLQKLQDRREAELRAKREEEERK
RREEKRRQQEEQKRREEEELYRRKQQCRQQQELILKLLQQAQPGGPGCISGSGTVWSGPQ
VSALSKQGKSLSLLELETERLLKQQAQHQRAQQQRDRHGGLSMGQWGEGSVGMWSGGGME
PKGSSGGMGVWEEAVKNQNSLRNMGMKNSRSSPSLSEQYMLRKKRTEEEDKLLKLLQGMK
PQDGFTTWCEQMLHALNTSANNSPSSSLDVATIVAYLKEVESPYEVLDFIRSYLGDTVEA
KEFAKQFLERRAKQKANHQRQQQQLSKEVPGLSLNNFPLQSMFQAAQMGKGGMYDSQAAK
MKKKQTMMLHSDPSILGYSFLGAGDRMSLGEMETVEDY
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaaacacttaacttcggcccagaatgttgtctaggggaagataatgggcga
tgcatatccaacttaaacttgaggctccgtgcactatccagagggcgtagtgtgacgtcc
ccccctccctctccagcattgccaaagtccaagctggccgattaccgctatggtcgtgag
gagatgctagcactttatatcaaagatgacaaacccccagaggatatgacgcaggataag
gagtttgctgctatcctgcaggatgagcctgtgcagcctttggcactggagcctctaact
gaggaggagcagagaaacttctccatgtctgtcaacagtgtggctgtgctgaggttgatg
ggaaagggaggcggggccgcccctgcagttgtggccaagggtcgtggaggaggcatcaga
gggagaggaagaggtgaaggtgcattctaccaaagagctcctggaggtcctgatgatgga
gaggtgggcttcggtcgtggccgagaaatgctccgcagccaaagctgggatgaccgagct
gagaggcccaagtttgagaagccaatcaggcgtgctgaggtagtgcgtccagggtttgag
gaggcgggacctcttggcaggaaggactcctggcgtgccgacagtggtaactggcgtacc
cttcgggaggaggaggaagaggcagcagcagcaggaggaggaggagggggagagcagcca
gcctggagagttgcaggaacccgccgtgatgatgggggtcctcggtctgcaggctggcgt
gatcatgggggccggaggaagtttgagtttgacttccgtgacagcgagggcccccgcagg
gaggacgacagggacggccttcctgagtggtgcactgatgaagaggatggcgagatgggc
acctttgactcctcaggggccttcatgtgcatcaagaaaggctccaagggcaccatcact
gaagaggatctggagtttgaagctctagaggaagatgagaacggtcaggaagtcaaggac
aacggtcaggaaggcaaggacaactataaggataactacactgacggagatgagtgtgaa
gcagcatgtgagggggtggtcaagtacaggactccatctcctcctgctgtctcggcccct
ccctcctcggaccctctccctgccccctgtgccccagaggctcccatggcacccatctcc
cacccctccaaaaccaaccacgtgcccactcaaggcagctcacctccagggagtggtgct
cagctcagtccagacccttcctcctctaccaccactttctccagcctgatgcctcctccc
tcctttggatctctcctcccatcaacagggggagaagtggaggaggatgagggcatgaag
cacctgcaacaggaggctgaaaagatggtggcatctctgcaggacacatcccttgaggag
gagtgcttcactcaagcactgcaggagagccacaacattacctcccaatctctcacacac
ccagccccacactcacacacacacacacacaccgctggacacacacactcccactctgct
catagggactgtgccctgcccctctcccacgaggcagccatgaagtggttctacaaggac
ccccaggcagagatccaaggtcccttctccactgtggagatgtgtgagtggttccaggca
ggctacttctccatgacactgctggtaaagaggggttgtgatgagggcttccagcccctg
ggtgacgtcatcaagatgtgggggcgcgtgcccttctcccctggcccctcccccccaccc
ctgctggtgagacagcctccaccacctcgggggtcctctggcaatatggatcaggagctg
ctgaagaaacagttagaacaagcagccactgcagctctataccagcaattgcagataagg
tttcagcacatgaacaggagtggagaatctagcatgatgaacaggtccatgtcagtacca
gataatgggtctatgtgggacatgcgtacctcagcctcccagcagtcaggaggtgaggcc
aacctatgggacttaaccatgagtcattccactcaggggccatctctggagcagctacag
aagctccaggaccggcgtgaggctgaactcagggccaagcgagaggaggaagagaggaag
cggcgggaggagaagaggaggcagcaggaggagcagaagaggcgtgaggaggaggagctg
tacaggcgtaagcagcagtgtcggcagcagcaggagcttatcctgaagctgctgcaacag
gcccagcccgggggcccagggtgtatctctgggtcagggactgtgtggagtggcccccag
gtctcagcgctctccaagcaaggcaagagcctcagcctgctggagctggagaccgagagg
ctgctcaaacagcaggcccagcaccagagggcccagcagcagagggacaggcatggaggc
ctgtctatgggtcagtggggtgaggggtctgtgggcatgtggtctggtgggggcatggag
cccaaaggcagctctggaggtatgggtgtctgggaggaggctgtaaagaaccagaacagc
ctccgcaacatgggcatgaagaacagccgcagcagcccctctcttagcgagcagtacatg
ttaaggaagaagcgtacagaggaggaggacaaattgctgaagctgctgcagggcatgaaa
ccccaggacggcttcaccacctggtgtgaacagatgctgcacgcgctcaacacctccgct
aacaactccccctcctcgtccctggatgtagccaccatcgtggcctatctgaaggaggtg
gagtctccctacgaagtccttgactttatccgctcctacctgggcgacactgtggaagcc
aaagagtttgccaagcagttcctggagcggcgtgccaaacagaaagccaaccaccagagg
cagcaacagcagttatcaaaagaagttccaggactgtccttgaacaactttcctctacag
tccatgttccaggcagcccagatggggaagggaggaatgtatgacagccaagctgcaaag
atgaagaagaaacagaccatgatgcttcactccgaccccagtatcttaggatattcattc
ctgggcgcaggggaccggatgagcctgggcgaaatggaaacagtggaagattattga
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