KEGG T09179: 109874301

Oncorhynchus kisutch (coho salmon): 109874301

Entry

109874301         CDS       T09179

Name

(RefSeq) tumor necrosis factor ligand superfamily member 13-like isoform X1

K05475

tumor necrosis factor ligand superfamily member 13

Organism

oki Oncorhynchus kisutch (coho salmon)

Pathway

oki04060

Cytokine-cytokine receptor interaction

oki04672

Intestinal immune network for IgA production

Brite

KEGG Orthology (KO) [BR:oki00001]
09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109874301
09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    109874301
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109874301
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:oki04052]
    109874301
   04090 CD molecules [BR:oki04090]
    109874301
Messenger RNA biogenesis [BR:oki03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109874301
Cytokines and neuropeptides [BR:oki04052]
Cytokines
  Tumor necrosis fators
   109874301
CD molecules [BR:oki04090]
Proteins
  109874301

SSDB

Motif

Pfam:

TNF

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

LG29:31165568..31168428

AA seq 235 aa
MTNRYTVHFHGSYLLYAVSLFLACLMVLQSNRVREMQVELRELRQWTSLVCGDIKESSTD
ISRCGISDSHRHTQWNGIRGKREISRHGRRRQRRTAGSSAFLHLVPLSSHSYDEDDYTLV
EWALGLSRLGEGLQVFGEKVTVVTEGTYFIYSQVLYKDTTWTMGHVIKKRLHGIETILMK
CIQSMPSNITVAQNTCYTAGVHYLEPGSTLELSIPRKSAGLVLKPHSTFLGMFRI

NT seq 708 nt +upstreamnt +downstreamnt
atgacaaaccgttatacagtacattttcatggctcatatctgctgtacgctgtgtcgctg
ttcttggcctgcttgatggtcctgcagtccaaccgggtcagagagatgcaggtcgaactg
cgggagctgcgtcagtggaccagtctggtgtgcggggacataaaggaatcgtctactgat
atctcgcgctgcgggatatctgactctcacagacatacacaatggaatggaattcgagga
aagagggagatttcaagacatgggagacggagacagcggcgcactgcagggagtagtgcc
tttcttcatcttgttcctctgtcatcacactcatatgatgaagatgactacactctggta
gaatgggctctaggactgagtcgtctaggggaggggctgcaggtctttggagaaaaggtc
actgtggtaaccgaagggacttacttcatctacagtcaggtgctgtataaagacaccaca
tggactatgggtcatgtgatcaagaagcgtctacatggtattgagaccatcttgatgaag
tgcatacagagtatgcccagcaacatcactgtggcccaaaacacctgctacacagccggt
gtccattacctggagccaggatccactctggaactctccattcccaggaaatctgctggg
cttgtcctcaagcctcactccaccttccttggcatgttcaggatctga

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