Oncorhynchus kisutch (coho salmon): 109874373
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Entry
109874373 CDS
T09179
Name
(RefSeq) homeobox protein orthopedia B isoform X1
KO
K24901
homeobox protein orthopedia
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109874373
Transcription factors [BR:
oki03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109874373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Harakiri
Motif
Other DBs
NCBI-GeneID:
109874373
NCBI-ProteinID:
XP_020321838
Ensembl:
ENSOKIG00005049408
LinkDB
All DBs
Position
LG29:complement(7525595..7531165)
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AA seq
341 aa
AA seq
DB search
MLSHADLLDARLGELSSPNSGLQLYWMKDAAAELLGHREALKCRLGGGVGSDPGHSGELA
PGPDTVEGATMLPGDDINNGGSNPSGMQVNSKEQQDKQQQNNSSQSGGSQSQKQKRHRTR
FTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVTESRVQVWFQNRRAKWKKRK
KTTNVFRNPGTLLPTHHGLHSQFNSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQLQL
PPALGRQHQHAMAQSLSQCSLSGPPPNSMGLSNMSSNGSGLQSHLYQNPFPGMVPASLSG
PTNVTGSPQLCSSPENDVWRGTSIASLRRKALEHTVSMSFT
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgctatcgcacgccgacctcctggatgctcgcctcggtgagttatcatcgccaaactcc
ggtcttcaactctactggatgaaggatgccgcggcggagctactgggtcacagggaggct
ctaaagtgcagactaggcggtggagtgggatctgaccccggccactccggcgagctagcc
ccggggccagacaccgtggagggggctaccatgctccctggagacgatatcaacaacgga
ggatccaacccttccggcatgcaggtcaacagtaaagagcaacaggacaagcaacagcag
aataactccagccaatccggaggaagtcagagtcagaaacagaagcgccaccggacccgg
ttcaccccggcccaacttaacgaactggagcgcagcttcgccaaaacgcactacccagac
atcttcatgagggaggaactggcactacggatcggcctaacggaatctcgcgtgcaggta
acggaatctcgcgtgcaggtttggttccagaaccgacgtgccaagtggaagaagcgcaag
aagaccaccaacgtttttcgcaacccggggacgctgctgcccacccaccacggcctgcac
agccagttcaactctgccgctgccgccgccgcggccatgggcgacagcctatgctccttc
cacgccaacgacacacgatgggctacggcagggatgccaggcgtctctcagctgcagctc
cctccagccctgggtcgccagcaccagcatgccatggcgcagtccctgtcccagtgtagc
ctgtccggtccgccgcccaactccatggggctatccaacatgtcgtcgaacggatccggg
ctccagtctcacctctaccagaacccgttccctgggatggtcccggcctccttgtccggt
cccaccaacgtgacgggctcgccccagctgtgtagctccccagaaaatgacgtctggaga
gggacgagcatcgcctccctgcggcgcaaagcgctggagcacacagtatccatgagtttc
acttag
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