Oncorhynchus kisutch (coho salmon): 109874398
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Entry
109874398 CDS
T09179
Symbol
arhgef28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109874398 (arhgef28)
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109874398 (arhgef28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
C1_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
109874398
NCBI-ProteinID:
XP_020321868
Ensembl:
ENSOKIG00005038932
LinkDB
All DBs
Position
LG29:complement(13565805..13692808)
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AA seq
1759 aa
AA seq
DB search
MELNRGEVPLYGQLEVCALLQVLEPEQTEFYVVLEGSRLVHVTVGKRTEDGKSLCFTVPG
HDLQETVSVTAYCHTEGRAKPCGGGASLDYVSDLPQEVAEYLLANSGCLSPQSHLEVLRR
VSAAPGEGNKEGDRSAGSGENYLGKTDQEDGYGGGRPRPDPEVECRLREMDERITQAMAN
LDYPLEWSGKASQPREEHQSRDTLLHLSVRLGLLSLSRFLIGQPRGQRALTLPNEEGATP
LQLAQNGGDHTLFMALTTPPVPVGVCTVWADRTCVLRVCPGSGTLNLTFLGGPESSVMDN
ILVLREKLTDHNILRQISALRGDVDVQMEDSDRADVHTSDTSDGGLGRGLPVEDLTLVVR
VFEEQLVLSLDDDEELPTLQTVKSQTAHPRRTQRQFSHSAVADKSASIIKGRSQLSTEVD
DLKVSVAGVMRDSSVTDSRVWDTVDSEVLLQQATVTPPPLPPYGLEEQQSPFVSSSPLSS
PADRALARLNSLSHSYLTNQRGSPPLESPNLSPSLVALVIDSEEEGVLEKSPFSPLTFDP
RSSGDDTAPDLTCTRTHSASSAGDPTPTKDMGDQKIRHRSYSYSSPKISLLPSRFSRDTS
AQPATSDLSPERREFSLSKQPQEKRELKFRKRAQSADDEGSVELAESLQHLTLSEFLKEI
EEEEWDKYNIPSKVASEKYKVIRTFSFLKSRMSSTRNKGKEKEREKEERDKDRQQNGHHF
STGSCAGPTVCLVCDKPATGKELLHCSSCTLMVHKGCNDFAPPCLKKLVKNRTASLPQMR
DSPSSCLIATSASLPMMSQRDRRETASLPNPLSSSVPSSTDSRLSESPEVVSDRRWSPGR
SEEPSSSTDSSLGEDCVDTGLHSDLAADALDYEAESWSLTVEHKFCKKQDKRVVKRQDVI
YELMQTEMHHLQTLCIMAEVFRRGMREEVQLDAGAVGRVFPCLDELLLLHHDLFNSMRER
RHSSAQPYGNRNYVIERIGDVLLQQFSEENAERMKQVYGDFCSHHTEAVTFFKELQQHNK
RFQTFIKQQSNNYLVRRREIPECILLVTQRITKYPVLLERILQYTQEDSEEHRDLSRALV
LIKEVIAAVDLRVREFEQGQRLQDVLNRMDNRSAAKLKNGHTFRKQDVLVPGRTLKHQGL
LLWKTATGRLKDVLALLLTDTLIFLQEKDQKFIFAAVDQKPPVISLQKLIVREVANEERG
MFLISASAAGPEMYEVHTSSKDERNTWMRHIREAVESCPEDEEENTSESEEERRASEARA
QKIQRLQENLSSQDHQICSTLEEKLQIYADLSALRGGTQEQHPEPRLLVQPHPEEVPRAA
VLLTAALREAENLRTTLSSRTCSPSSLCSPHRDPLTHPLSSANPPTPMDNPTDGEASPGD
PDTRDGEWSASQGLVLQSLTQPHTGDTNNNNLKVAQSVQSLTQLLYSLQAAVTIQDSFYE
VQKLLLRESDRSGPCPPRPHPPCLQEQEKHRNQEKRREEVAAAVRLQGQLRQERQRWERE
CQLRHSQQGELESRLEERERQCHLEAERLKQEWEELEEQLGEYQHSLERLREGQRSVGKE
RERLETQQKLLQSWRHSRQRSLPVMVIPLDGHQDSLPGQSGVHLDNAGSVFVNEAAFTTS
KVLNNRHMHHHIQQHQRGGTLGYGDDPRAHNSLNTILARSSQRHTLHPDTNTPQCWAGGA
GVTGYLYTTSGGQGTEHTPNDINTHSYVRETWSSTATVSGQYPGAPHHGDHQLVLSSLVP
LETESVDGEEGGEENIVYL
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaacagaggagaagtgcctctatatggccaattggaagtgtgtgctcttctg
caggttctagaaccagaacagacagagttctatgtggttttagaaggttccagactagtc
catgttactgtagggaagagaacagaggatggaaagtctctgtgcttcactgttccaggt
catgaccttcaggagactgtctctgtcacagcttattgtcacacagagggcagagccaag
ccctgtggaggcggggcctcgctggactacgtcagtgatttgccacaggaagtggctgag
tacctgctagccaatagcggctgtctgagtccccagagccacctggaggtcctgaggagg
gtttcagcagctccaggggaggggaacaaggagggtgacaggagtgctggctcaggagag
aactatctggggaagacagaccaggaggatgggtatgggggtgggagacccagacctgat
ccagaggtggagtgtcgtctcagggagatggatgagaggataacccaggccatggccaac
ctggactaccctctggagtggagcggcaaggccagccaacctagagaagagcaccagtcc
agggacactctcctccacctctccgtgcgtctgggtttgctcagtctctcccgcttcctg
attggccagcccaggggtcagagggcactgaccctgccaaatgaggaaggggccacaccc
ctccagctggctcagaacggaggagaccacaccctctttatggcgcttaccaccccccct
gtacctgtcggggtgtgcactgtgtgggcagataggacttgtgttctaagggtatgtcct
gggtctggcacccttaaccttaccttcctggggggtcctgagagcagtgttatggacaac
atcctggttctcagagagaagctgacggaccacaatatcctcagacagatctcagcactg
agaggtgatgttgatgttcagatggaggacagtgacagagcggatgtccatacaagtgat
accagtgacggaggtctaggcagggggctgccagtagaagaccttacactggtggttaga
gtttttgaagagcagcttgttctctctctggatgatgatgaggaacttccaacattacaa
acagtgaagtcccagacggcccaccccagacgaacccagagacagttctcccactcggct
gtggcagacaaatcagcctccatcatcaagggcaggagtcagctctccacagaggtggat
gacctcaaggttagtgttgccggggtaatgagggacagctctgtgactgacagcagggtg
tgggacacagtggactcagaggtcctcctccaacaggccaccgtcacccctccaccccta
cctccctacggactagaggagcaacagtcccccttcgtctcttcttctcccttgtcctcc
cctgctgaccgagccctcgcccgactgaacagcctttcccactcatacctaaccaatcag
agagggagcccacctctggagtcacctaacctcagccccagtctggtagctctagtgatt
gacagtgaggaggagggggttctggagaagtctcccttctctcctcttacctttgaccct
cgtagcagcggggacgacaccgccccagacctcacctgcacacgcacacactctgcctcc
tcagccggtgaccccacccccacaaaggatatgggcgaccagaagatcagacaccgctcc
tactcctactcctcccccaagatcagcctgctgccctcccgcttctcacgtgacacctca
gcccagcctgcgacatctgacctcagcccagaacggagagagttcagcctatcaaagcaa
cctcaagaaaaaagggagttaaagttccgtaagcgtgcccagtctgcagacgacgagggc
agcgttgagctggcagagtccctccaacacctcaccctctcagagttcctcaaagaaatt
gaagaagaggagtgggacaagtacaacatcccttccaaggtggcgtcagagaaatacaaa
gtgattcgtaccttcagcttcctcaagagccggatgtcgagcacacgcaacaaggggaag
gagaaggaaagggagaaggaggagagagacaaggacaggcagcagaatggacatcacttc
tccacggggtcctgtgctggacccacggtctgtctggtctgtgacaaacctgctactggc
aaggaacttctgcactgctccagttgtacactcatggtccataagggttgtaatgacttt
gctccgccgtgtctaaagaaacttgtgaagaaccgaacggcatccctcccgcagatgcga
gacagtccctcttcatgtctgatcgccacctcagcctctctacctatgatgagccagagg
gacaggagggaaacagcctccctccccaatcccctctccagtagcgtcccctcttccact
gacagcaggcttagtgagagtccggaagtggtgtctgacaggagatggagtcctggccga
tcagaggagccatcctcctccactgactcctccctcggagaagactgtgtggacaccggt
ctccacagcgacctggctgctgatgctctggactacgaggctgagtcttggagtctgaca
gtggaacacaagttttgtaagaagcaggacaaacgggtggtcaagagacaggacgtcatc
tatgagttgatgcagacagagatgcaccacctccagactctgtgcatcatggctgaggtc
ttccggcgagggatgagggaggaggtccagctggacgcgggcgccgtggggcgtgtcttc
ccctgtttggacgaactcctcctcctccaccacgacctcttcaactccatgagggaacgc
cgccacagctccgcccagccatacgggaacaggaactacgtcatagaacgcatcggagac
gttctgctgcaacagttttctgaagagaacgcagagaggatgaaacaggtgtatggagac
ttttgcagccatcacactgaggcagtcaccttcttcaaagagctacagcaacacaacaaa
cgatttcagaccttcatcaagcaacaaagtaataactatttggtgcggaggagagagatc
ccagaatgcatcttgttggtgacccagaggataactaagtaccctgttctgttggagagg
attctacagtacacccaggaggacagtgaggagcacagggacctctccagagctctggtt
ttgatcaaggaggtgatcgcggctgtagacctgagggtcagggagtttgagcagggtcag
aggttacaggacgtcctaaaccggatggacaaccgtagtgctgccaagctgaagaacgga
cacacctttaggaagcaggatgttctggtgccaggccggaccctcaaacaccagggcctg
ttactgtggaagaccgccaccggacgactcaaagatgtcctggctctccttctcaccgac
acactgatcttcctacaggagaaagaccagaagttcatattcgctgctgtggaccagaag
cccccagtgatctctctgcagaagctgattgtcagggaggtagccaatgaggagagaggg
atgtttctgatcagtgcatcggccgcgggtccagagatgtacgaggtccacacctcctcg
aaagacgaacgcaacacctggatgagacacatccgagaggctgtggagagctgtccagag
gatgaggaggagaacactagcgaatcagaggaggagagaagagcatctgaagccagagcc
cagaagatacaaagactacaggagaacctgtccagtcaggaccatcagatatgttccact
ctggaggagaagctacagatctatgctgatctgtctgccctgaggggcggtacccaggaa
cagcaccctgagccacgcttactggtccagccacacccagaggaggtgccccgggctgca
gtactgctcactgccgcgctccgagaggctgagaacctgaggaccactctgtcctccagg
acctgttctccctccagcctctgcagccctcacagggaccccctgacccaccctttgtcc
tcagccaaccctcctacccccatggacaaccccacagacggcgaagcctcacctggggac
cctgataccagggacggggagtggtcagcctcccagggcctcgtactacagtccctgact
caaccccacaccggggacactaataataacaaccttaaggtggctcagagtgtccagagc
ttgacccagttactctacagtctgcaggcagcggtaaccatccaagacagtttctacgag
gtacagaagctcctcctccgtgaaagtgaccgctccggcccctgcccgccgagaccacac
cccccgtgtctccaggagcaggagaagcatcgtaaccaggagaagcgccgtgaggaggtg
gcggcggcggtgcggttacagggtcagctgcgccaggagaggcagcggtgggagagggag
tgccagctgcgccacagccaacagggggagctggagagcaggctagaggagagggagaga
cagtgtcacctggaggctgagaggctgaagcaggagtgggaagagctcgaagagcagctg
ggggagtaccagcatagcctggagaggctgagggagggccagagaagcgtggggaaggag
agggagaggctggagacccagcagaagctgctgcaaagctggagacacagccgacagagg
agcctgcctgtcatggtcataccgctggatggtcatcaggactcacttcctggtcagtcc
ggcgtccatcttgacaacgccggctcagtgtttgtcaatgaggcagcgttcaccacgtcg
aaggtgcttaataaccgccacatgcaccaccacatacagcagcaccagagaggtgggacc
ctggggtacggagatgaccctcgagcccacaacagcctgaacaccatactggcccgctcc
agccagagacacacgctccaccctgacacaaacacaccccagtgctgggcggggggtgcc
ggtgtcactgggtacctctacacaacctcaggtggacaggggacagagcacacacccaac
gatataaacacacacagctatgtgagggagacgtggtcctcgacggcaactgtgtctgga
caatatccgggtgcacctcaccatggcgatcaccaactggtcctctcctccttggtccca
ctggagacggagagtgtggatggggaggaggggggagaggagaacattgtgtacctctga
DBGET
integrated database retrieval system
