Oncorhynchus kisutch (coho salmon): 109874471
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Entry
109874471 CDS
T09179
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109874471
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109874471
Surveillance factors
Other surveillance factors
109874471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
109874471
NCBI-ProteinID:
XP_020321956
Ensembl:
ENSOKIG00005035781
LinkDB
All DBs
Position
LG30:complement(15063225..15095554)
Genome browser
AA seq
1407 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGHGGGSSSSVATSPPLSPALPKYKLADYRYGREEMLALYV
KDREIPVDLHDKDFLPILQEEPLPPLALVAFTEEEQRNFSMSVNSAAVLRLMGRGGGPVG
PGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGGFGRGGREMHRSQSWEESHAESIFSPSR
GDRRFEKPGRKESEVAPAHFPMNHIRANYEDVGTGVGGLPVRKHDFTRSESENWRTSRDE
ANGEDGDEGGWRLAGASRRDSDRWCPPSPDGLRSAVRREVHPGEQPRQRRFPFDAREDER
GYRRPRSGSGSLEEDGSSLPEWCLEDAEEETGTFDSSGAFLSLKVRKAPKEPILEEAELD
FRPLEECDEGLEEDGQPRETKNPDREARRDPDRKQDVGRGVVEAPPAPSPPEPQPSAPLL
PPSQPDRAEEPERPLERPPAPEHRPEANKVPLNVPMSMPMSNTMLDSLPIPHTAAHTLTV
SAPSSTIQMQQKPPDVPVAMPVPLPFSTSLMAQSTSIMTPNIMAPSTGLMAPIGRPTVMP
PHHTMVEDERLKHFEQEAEKMVAYLQDSDDRLAAKNTAPEPAGLPLTHEAALKWFYKDPQ
GEMQGPFSNPEMTEWFQAGYFTMTLLVKRGCDEVFQPLGEIIKMWGRVPFAPGPAPPPLL
GDAGDQERLKLQQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAQALSSAPHQQQQQQQ
QQINLLLQQYQALKMRSAEHTTSESLLTPVTRSMSVPDSQGSVWEMQHPSSQVSCTPNIQ
QPAPSAWEGSSVWDLPIDSMAQAPTIEQMQQLEKNKAAKVSPPHLLEMERREAELRAKRE
EEEEKERKRLEEALRARQEAERKRLEEELSRHKQEEELRQQEEAQRRQKEEEERQAQEEA
LRRLEERRREEEERQQREEFLRKQEEEHRKQEEERREEERRKQEEERRKQEELEALRRCE
EEKRLEDEAVAAAMALARQQQEEAKRREQEAARQQELARQRQQQQEALRRLQQQQQQQQL
AQMKLPSSSKWGQQSAVTAAAISQSQNALSLSEIQKVEEERERQAREEQRRQQAELLKLQ
QQQALQEALQPQAKLSGWGSVAKQPAATKSLLEIQREEAQQVKQRKEQGGGSQQPSHPTV
TQSNRAQNRATTALSSSVWGSVATSSMGGGAPNWGGESSSIWGDSTNSNMGFWDETAQPP
PQAPPPARKPNAQKNNKANANLSSRANKKVEEEEKLLKLFQGVNKSQQDGFMQWCEQTLH
TLNTANNLDVPTFASFLKEVDSPYEVHDYVRAYLGDTSEAKEFAKQFLERRAKQKANQQK
EPQAPRNQQPTLKQQQQDSVWGGTGSPSRYQSNHTSLQQQARFETVTSGKKKKKQKMVRA
DPSLLGFSVNAASERLNMGEIETVEDF
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcagacactcaacttcggaccagaatggctccgggccctgtctgggggt
ggccatgggggtggtagcagcagtagcgttgccacctcaccaccactctctcctgcattg
ccaaagtataaacttgcggactaccgctacgggagagaagaaatgctagcactttatgtc
aaggatagggagatccctgtagacctacatgataaggattttctgcccattttacaagag
gagcccctgccaccgctggcacttgtagcttttacagaggaagagcagagaaatttctcc
atgtctgtaaacagtgcagcggtgctcaggctgatgggaagaggagggggcccggtgggg
ccaggggcaccgaggggtcgaagcacttcacggggaagaggacggggtagaggagatgga
gggttttaccaaagaagttttgatgacgtggagggaggctttggccgcggaggcagggag
atgcaccgctcccagagctgggaggagagtcacgctgagtctattttctccccatctagg
ggagacagaaggtttgaaaagccaggtcgaaaagagtcagaagttgctcctgcccacttt
ccgatgaatcatatccgtgctaactacgaggatgttgggaccggtgtgggaggcctgcct
gtgaggaagcacgattttacacgttcggagagcgagaactggcgcacgtcccgcgacgaa
gcaaatggtgaggacggtgacgaggggggctggcgcctggcgggtgcctcgcgacgcgac
agtgaccggtggtgccccccgagtccagacgggctgcggtcggcagtgcggcgagaggtg
cacccgggggagcagccacggcagcgccggttcccgttcgacgccagagaggacgagcgc
ggctacaggcgtccccggtcaggcagtggcagcctggaggaggatgggagcagcctgcca
gagtggtgcttggaggatgctgaggaggagacgggcaccttcgattcgtccggagccttc
ctctcgctcaaggttcgaaaagctcccaaggagcccatcctggaggaggcagagctggac
ttcagacccctggaggagtgtgacgagggccttgaggaggacggacagccccgggagacc
aaaaacccagacagagaggcaagaagagaccccgacagaaaacaggatgtggggagaggg
gtagtagaggcgccgcctgctccctcgcctccagaaccccagccctccgcccctctgctg
ccccccagccagcccgacagagcagaggagcctgagaggccacttgagcgacccccagcc
ccggaacacaggccagaggccaacaaagtccccctgaatgtccccatgtcgatgcccatg
tccaacacaatgctggactccctccccatcccccacaccgcagcacacactctcacagtg
tcggccccgtcgtccaccatacagatgcagcagaagcccccggacgttcccgtggctatg
cccgtcccactgcccttcagcaccagcctcatggctcagagcacgtctatcatgaccccc
aacattatggcccccagcacgggcctcatggctcctattggaaggcccacggtcatgccg
ccacaccacaccatggttgaagatgagagactgaagcactttgaacaggaagcagagaag
atggtggcgtatctacaggacagtgacgaccggctggctgccaagaacacagcacccgaa
ccagccggcctgccgctcacacacgaggctgctctgaagtggttctataaagacccccag
ggagagatgcagggtccgttcagtaacccggagatgacagagtggttccaggcaggctac
ttcacaatgaccctgctggtgaagagaggctgtgacgaggtcttccaacccctgggggag
atcatcaaaatgtggggcagggtccccttcgcccctggaccagcaccgccacccttactg
ggtgacgctggggaccaggagcgtctgaaactgcagcaggagctgactgccctcaacctg
taccagctgcagcagctgcagtaccagtacctgttgaggcagcaatacgcccaggccctg
gcccagcagaaagcccaggccctcagctcagcaccacaccagcagcagcagcagcagcag
cagcagatcaacctgctcctccagcaataccaggccctcaagatgaggtcagcggaacac
acaacatccgagagtctcttaactccggtgacgcggtccatgtctgtaccagactcccag
ggttctgtgtgggaaatgcagcacccctcctctcaggtctcttgcacaccaaacatccag
caacctgccccaagtgcgtgggagggcagcagtgtgtgggatctgcccatagactccatg
gcccaggcccccaccatagaacagatgcaacagctggagaagaacaaggctgctaaggtc
tctcctcctcatctactggagatggagcggcgtgaggctgagctgagggccaagagagaa
gaggaggaggagaaggagaggaaaagactggaggaagcgttacgggcccgacaggaggcg
gaacgcaaacgcctggaggaggagctatcacgtcataaacaggaggaggagttgaggcag
caggaggaggcacagcgcagacagaaggaggaagaggaacggcaggcacaggaggaggct
ctccgcagactagaggaaaggaggagggaggaggaagagcggcagcaaagggaagagttc
ctccgtaaacaggaggaggagcaccggaagcaggaggaggagcgccgggaggaggagcga
cggaagcaggaggaggagcgccggaagcaggaggagctggaggccctgaggaggtgcgag
gaggagaagcggctggaggatgaggcggtggcggccgcgatggcgttggcaaggcaacaa
caggaagaggcgaagaggagggagcaggaggccgcgaggcagcaggagctagccagacag
aggcaacagcagcaggaggcgctccgccgactacagcagcaacagcagcagcaacagcta
gcccagatgaagctgccgtcgtcctctaagtggggccagcagtcagcagtcacggcagca
gccatctcccagtcccagaacgccttgtcgctctctgagatccagaaagtagaggaggag
agggaacgacaagcacgagaagagcagcggcgccagcaagcagagctcctaaagctccag
cagcagcaggccctgcaggaggccctgcagcctcaggccaagctctctggttggggcagc
gtggccaagcagccggccgccaccaagtccctgctggagatccagagggaggaggcccag
caggtgaagcagaggaaagagcaggggggtgggagccagcagcccagtcaccccaccgtc
acccagtcgaaccgcgcccagaacagagctaccactgctctgagttcctcagtgtggggc
tcggtggccaccagcagcatgggcggcggagctcctaactggggcggagaaagcagcagc
atctggggcgacagcaccaactccaacatgggcttctgggacgagacggcccagcccccg
ccacaggccccgccccccgccaggaagcccaacgctcaaaagaacaacaaggccaacgcc
aatctcagcagtcgggccaataagaaggtggaggaggaggagaagctgctgaagttgttc
cagggggttaataagagccagcaggatggcttcatgcagtggtgtgagcagaccctgcac
accctcaacaccgccaacaacctggacgtcccgacatttgcgtctttcctgaaggaggtg
gacagtccgtacgaggtgcacgactacgtgcgcgcctacttgggggacacgtccgaggct
aaggagtttgccaagcagttcctggaacgccgtgccaagcagaaggccaaccaacagaaa
gagccccaggccccacggaaccagcagccgactctcaaacagcaacaacaggattcagtg
tggggcgggacgggctctccgtctcggtaccagtcgaaccacaccagcctccagcagcag
gcacgtttcgagaccgtcacctcagggaagaagaagaaaaagcagaagatggtccgggca
gaccccagcctgctaggtttttctgtgaacgcggcgtctgagaggttgaatatgggcgag
atagagacggtggaggacttttaa
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integrated database retrieval system
