Oncorhynchus kisutch (coho salmon): 109874477
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Entry
109874477 CDS
T09179
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109874477
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109874477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
109874477
NCBI-ProteinID:
XP_020321967
Ensembl:
ENSOKIG00005024844
LinkDB
All DBs
Position
LG30:complement(13464114..13483638)
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AA seq
542 aa
AA seq
DB search
MDGIATDVAVGVKRGSDELNLYSTSPNSVTANGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVF
IQFSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPNSDTSALDSVLAQAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPAMAAALNKDSSLLGTPSGM
VAPYSSGGGFQSSLSYSQGGGAISPLSAAAAAAAAAGRVALSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMFGKIIRVTL
SKHQTVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPEDVTEE
DLRQLFSNAGGTVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKVSFSKS
TI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgccactgatgttgcagttggcgtgaagagaggctcagatgaattaaat
ctctacagcaccagccctaactctgtgactgctaacggcaatgacagcagtaaaaaactg
agagtagaggacaggatggagagtcccccatcccgggtgctccacatccggaagctgccc
agtgaggtgtctgagacggaggtcatcgccctgggcctaccgttcggcaaggtcaccaat
atcctcatgctgaagggcaaaaatcaggcgttcctcgagctgggtacagaggaggcggcc
gttacaatggtgaactactatacggcagtgacgcctcaggtccgcaacgtcccagtgttc
atccagttctctaaccacaaggagctcaagacagacagtgctctcaaccagcgtgcacag
gctgtcctccaggcagtgtcggcggttcaggagggtggctctcccaactctgacaccagt
gcgctggatagtgttcttgcgcaggcccccagccctgtgctcaggataatcattgacaac
atgttctaccccgtcactctggacgtcctccagcagatcttctccaagtttggaacagtc
atgaagatcatcacgttcaccaagaacaatcagttccaggccctgcttcagttcagcgaa
ccagtcaacgcccagcaagccagactgtccctggacggccagaacatctacaactcatgc
tgcacactgcggatcgacttctccaaactggtcaacctcaatgtcaagtacaacaacgac
aagagccgcgactacacccggcccgagctgcccgccggcgatggccagccctccctagac
cctgccatggctgccgcacttaacaaggactcctccctgcttggtaccccctcaggaatg
gtagctccctactctagcggtggagggtttcagtcttctctctcctactcgcagggcgga
ggagccatcagtcctctgagtgctgcggccgcagcggcggccgctgcggggagggtggcg
ctctccggacactctggctgcagcggtgtgctcctggtcagcaacctcaacgaagagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgcgtgaag
atcctctacaataagaaggacagtgctctcatccagatgtcggacgggaaccaggcccag
ctcgcaatgagccacctgaacggccagaagatgttcgggaagataatccgtgtgacactc
tccaagcatcagacggtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaactcccccctgcaccgcttcaaaaagccaggctccaagaactttcagaac
atcttccctccgtccgccacgctccacctctccaatgtcccggaggacgtgactgaggag
gatctgagacagctgttctctaacgcaggtggcactgtgaaggcattcaagtttttccaa
ggccacaaaatggcgctactccagatgtctacagtcgaggaggccatccaggccttgatg
gacctccacaactacgacatgggcagcaaccaccacctgaaggtctccttctccaagtca
accatctag
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integrated database retrieval system
