Oncorhynchus kisutch (coho salmon): 109874509
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Entry
109874509 CDS
T09179
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109874509
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
109874509
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
109874509
NCBI-ProteinID:
XP_031671570
Ensembl:
ENSOKIG00005027901
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Position
LG3:63437007..63538948
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AA seq
1329 aa
AA seq
DB search
MGEGEDGDKDTRRKSIRMKPLPSPTSRGSFKGIGETRSGDTVIMETDIGRPTKTSLNGDC
RRFRGSLSSITSRHVHDSDSAEERHLITEGDVTPSEESPPGAIGGAADQGAQGASGGGAG
GAQHASLDQESGFIKLDGIDQISPDDERLYQAGFIHRQFGAMLQPGVNKFSLRMFGSEKA
VEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIVIPVGITFFKDEHTPPWIIFN
VISDTFFLMDLVLNFRTGIVKEDNTEIILDPQQIKIKYLRSWFVVDFISSIPVDYIFLIV
ETRIDSDFYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAMVRIV
NLIGMMLLLCHWDGCLQFLVPMLQDFPQDCWVSKNKMVNDTWGQQYSYALFKAMSHMLCI
GYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMS
FHKLPADMRQRIHDYYEHRYQGKMFDEESILGELNEPLREEIINFNCRKLVASMPLFANA
DPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLSDGSYFG
EICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNS
LLQHKVQHDLSSGVLNYQENEIIQQIVQHDRDMATCAHLLQNIPPPQPPSPGHTPVIWAP
LIQAPLQAAAATTSVAIALTHHPHLPHLPAALFRPPVTVLGSRNLQDPPPGRLKKFHTSA
PTSFMGPDSPSSTPSKLHCSGMDTALLASFRAHHTTQGSGAASSSQQASSSSGTQPGPSG
ASAFPFGPFSSSGGSPSHSTAQLHSQPQTQQPFRCTTPPLAALFQQGAVGGAGMGGATGG
ATGGATGWSSGGATEGEVGGAIGGADERATGGTIRRATGWGRRGSIEGYTTGGHIGGATG
GYSGGASGGHIRGTSGGHIGATGGAMGGAAGGHIGGAMGGAIGGMTIGVLGTSSSGCSIS
PQSTGSSGNIQSCQLLHSQLPLNPPQVGSQQQFAGGGRTPSAFYHSPPPGSPSSSSTQQA
PEGSPSPLAQFSLAGLQSGLQSGLQSGLQSGLVPQLSLERSALASLAQYGSANGSPCYTP
LGPSPTVQSPVTGRTFHYSDSSSATGSHSSLLMPQTSLPSQQHAAGSESLLGLGSFSEDM
KLLSCSNPSLPQDVAQAMGYSSLPRSSPSRSSPPRSSPPRSSPPRSTPPRSSMEPGYCLS
SPYSSPILVPKPCSSVSGHMAPPVPAQMSPGHLQHQTQTPVASPALPPRKGSAAHSELEP
VRSKLTSNL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaggagaagacggcgacaaggacacccggaggaagagtattaggatgaaaccc
ttgccgtcaccaacctccagaggaagcttcaaaggcatcggggagaccagaagtggggac
acagtgatcatggagacggacattgggagaccaacgaagaccagtttaaacggagattgt
cggagatttcgtggcagtctctcctccatcaccagtcggcatgtgcacgactcagactcg
gcggaggagaggcacctcatcacagagggggacgtcaccccgagcgaggagagccctccc
ggagctattggcggtgcggcggaccaaggtgcgcaaggcgccagcggtggtggtgctggt
ggtgcccaacatgcttctcttgaccaggaatcagggttcataaagttggatggcattgat
caaatttccccggacgacgagagattgtaccaggcaggattcatacacaggcagtttggg
gcaatgctgcaaccgggggtcaacaagttctccctgaggatgtttgggagcgaaaaggca
gtggaacgggaacaggagcgggttaaatccgccggattttggataattcatccttacagt
gatttcaggttctactgggacctgaccatgctgctgctgatggtggggaacctgatcgtc
atcccggtgggcatcaccttcttcaaagacgaacacacgcccccctggatcatcttcaac
gtgatctcagacaccttcttcctcatggacctggtgctcaacttccgcaccggcatcgtc
aaggaggacaacaccgagatcatcctggacccacaacagatcaagatcaagtacctgagg
agctggttcgtggtggacttcatctcctctatacctgtggactacatcttcctcatcgtg
gagacacgcatcgactcagacttctacaagacggcccgggcgctgaggatcgtccgcttc
accaagatcctcagcctgctcagactgctcaggctgtccaggctcatcagatacatccac
cagtgggaggagatcttccatatgacctatgacctggccagtgccatggtgcgtatcgtc
aacctgattggtatgatgctgctgctatgccactgggacggatgtctgcagttcctggtt
cccatgctgcaggacttcccccaggactgctgggtgtccaaaaacaaaatggtgaacgac
acatggggacagcagtactcctatgccctgttcaaagccatgagccacatgctgtgtatc
gggtacggcatgtacccccctgtgggcatgacggacgtgtggctcaccatcctcagcatg
atcgtgggcgccacctgctatgccatgttcgtgggtcacgccaccgcactcatccagtct
ctggactcctcccgtcggcagtaccaggagaagtacaaacaggtggaacagtacatgtcc
ttccacaagctgccggctgatatgaggcagaggatccatgactactacgagcatcgctac
caaggcaagatgtttgacgaggagagcatcctgggagaactcaacgagccactcagagag
gaaatcattaactttaactgtcgaaagctggtggcttccatgccactgtttgccaacgcg
gaccccaactttgtgacctccatgctgaccaagctgcgcttcgaggtgttccagcccgga
gactacatcatcagagagggcaccatcggcaagaagatgtacttcatccagcacggagtg
gtcagcgttctcaccaagggcaacaaggaaaccaagctctcagacggatcctacttcggg
gagatctgtctgttgacgcggggtagaagaacagccagcgtcagagcagacacctactgc
cgtctgtactctctgtctgtggacaacttcaacgaggtcctggaagagtaccccatgatg
agacgggccttcgagaccgtggctctggaccggctggaccgcatagggaagaagaactcc
ctcctgcagcacaaggtgcagcacgacctgagctccggcgttctcaactaccaggagaac
gagatcatccagcagattgtgcagcatgacagagacatggccacctgtgcccacctcctc
cagaacattcctccacctcagcccccgtctccggggcacacccccgtcatctgggctccc
ctcatccaggcacccctgcaggctgctgccgccaccacctctgtggccatcgccttgacg
caccacccccacctcccacacctccccgctgcgctcttccgcccaccggtcacggtcctg
ggctccaggaacctccaggaccctccccccggccggctgaagaagttccacacgtcggcg
cccacctccttcatgggacctgactccccctccagcaccccatctaaactgcactgctct
gggatggacacagccctgctggcctccttccgggcccaccacacgactcaggggtcaggg
gcagccagctccagtcagcaggcgtccagcagcagtggaacccagcctgggcctagtggg
gcctccgcctttccctttgggcctttctcctcctccgggggctctccttcccacagcacg
gcccagctccattcacagccccagacgcagcaaccattccgctgcaccaccccgcctctc
gctgccctcttccagcagggagctgtggggggagcagggatgggtggagcaacaggggga
gctactgggggggctacaggttggtcttcaggaggcgctactgaaggtgaagtaggagga
gcaataggaggggctgatgagagggccacaggtgggacaataagaagggccactggttgg
ggtagacgtggatctatagaaggatataccactggagggcatataggaggagccactggg
gggtactcaggaggggctagtggtgggcacattagaggaactagtggaggccatatagga
gctactggtggagcaatgggaggggcagctggagggcatataggaggggcaatgggaggg
gctataggtggaatgacaattggagttctgggtacctctagttctggttgtagtatcagc
ccccagtccactggttcatccggcaacattcagtcctgtcaactgctccacagccagctg
cccctaaatcctccacaggtgggctcccagcagcagtttgcaggtgggggcaggactcct
agtgcattctaccactccccccctccaggctccccatcctcctcctccacccagcaggcc
ccagagggttccccatctcccctggcccagttcagcctggcaggcttacagtctggactt
cagtctggcctccagtctggcctccagtctggcctggtccctcagctgtccctggagagg
tctgccctggcctcgttggcccagtacggctcagctaacggctcgccctgctacaccccc
ctcgggcctagccccacggtccaaagcccagtcacaggaaggactttccactacagcgac
tcctccagtgccactgggtcccacagctctctgctcatgccccagacctccctccccagc
cagcagcacgcagccggcagtgagtctctgctggggctgggcagcttctctgaggatatg
aaactattgtcctgttctaacccctccctgccccaggatgtggcccaggccatgggatac
tcctcactcccacgttcctcaccctctcgcagctcgcccccacgctcctcaccccctcgc
agctcgcctccacgctccacacccccacgctcctccatggagccaggatactgtctctcc
tcgccctactcctcccccatcctagtgcccaaaccctgtagctcagtgtcaggacacatg
gctcctcctgtccctgcccagatgtctccaggacacctgcagcaccagactcagaccccc
gtggcctccccggccctgccgccacggaaaggctcggcagcccactctgaactagaacct
gtccgctccaaactaacctccaatttgtga
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