Oncorhynchus kisutch (coho salmon): 109874536
Help
Entry
109874536 CDS
T09179
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
oki04517
IgSF CAM signaling
oki04520
Adherens junction
oki04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109874536
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109874536
09144 Cellular community - eukaryotes
04520 Adherens junction
109874536
04530 Tight junction
109874536
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oki01009
]
109874536
Protein phosphatases and associated proteins [BR:
oki01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109874536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
109874536
NCBI-ProteinID:
XP_020322073
Ensembl:
ENSOKIG00005042820
LinkDB
All DBs
Position
LG30:complement(16583705..16823267)
Genome browser
AA seq
1378 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDLLSDVADDKDRLVAVYDEQDPHHGGDGTSASSTGTQSPDLFATELNSSNMSAFQPYQ
AASEIEVTPSALRSNMPLHVRRSSDPALATINGPFSDPRVTLPPEKPSRKNPTRWSTTAG
FLKPRRSVGGTGTGTNSLERKGNGPDTYRSLPRDAGTCANQREFQRETARSSLSANHPMV
DRWLERREQDEEEEENSRIEPIGRADSCMDHTPLRSLDDIVKLVEVSNDGGPLGIHVVPF
SARDRRTLGLLVKRLERGGKAQEQGLFQENDCIVRINNGDLRNIHFEQAQNMFRQAMRSP
VIMFHVVPNLMKAQYEQLSHSERNPNVAYSSGRFSPDSLASERGSTTSGLDHTPQSRGPH
PHPEQGDAYTPLPHPHGGSMGKPPSGHAPSPHRVLNSTPTAGFTKKVGRRLNIQLKKGPE
GLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLVGRTQEEVVA
LLRATPMGGAVGLVVLRQEETFLNAEPQMQSPRDLKVEEDDLVLTPDGTREFLTFEIPLS
DSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDRRLRVNDQLIAVNGESLIGKT
NQEAMETLRKSMSVEGNKRGTIQLIVARRVTKRSELEAPGSPLGPEQTLLNSSLLDDRER
RISHSLYGGIEGLDDNLMPQQALMGRMMGNYQLSPTVNMPQDDTVIIEDDRPPVLPAHLS
DQSSSSSHDDMGFHVEVPPTWAKDTPIQNESTLSPDDTDPDGAFQREGFGRQSMSEKRTK
QFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTRDVGPSLGLKKSSSLESLQT
AVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAATEEDDEGMETLEEDTEE
SSRSGRDSVSTVADLTPLPNTERPLANGNRANEDKKKDKGGKDKKKPDRDKEKDSKNRAK
KGMLKGLGDMFRFGKHRKDGEKLERKGRLEELQASEEETLRMKLEQERIQAKTRELRERQ
ARERDYAEILDVNLCRDEEHPYAGIGPLDTSLDSGHSRPQSPRDNHHQDSSLYTQVGKTR
NANGRPPSADSNRLAPSNHDRIQRLRHEFQQARGDDDPDDRRRTYSFEQPWPNNTNTGPS
PYQTDGQQTGRHSVSVEVQRQRQRQEERDAFQQAQRQYSSLPRQPRKNPSSISQDSWDKV
YPPGDGFQTAKENPRYSSYKGSRNGYPGMSGVNARVLLEAQELLRQEQRRREQEAKGKQL
LLAPPQEHPGNNTYDGYSAHKDPVSPKGPYRQDVPPSPSQLARLNKLQGPEKGRPFYS
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaaggactagggtggtggtaccgtgcggagatggaaat
attaaagtccatactctcatccagcaagccgtcatgagatacaaaaaagccattgcaaag
gatgccagctactggttacaggtgcaccggttggagcatggggacggaggtattctagac
ctggatgacttgctgtctgatgtggctgatgacaaagaccggctggtggctgtgtatgat
gaacaggaccctcaccatggaggcgacggcaccagcgccagctccacgggaacccagagc
cccgacctgttcgccacagagctcaactccagcaacatgtccgctttccagccctaccag
gccgccagcgagatagaggtcactccgtccgcccttcgatccaatatgcccctccatgtg
cgtcgcagcagtgacccggccctggcgacgatcaacgggccgttcagcgacccccgcgtg
accctgccaccagagaaaccgtccaggaagaaccccacccgctggtctaccacggctggc
ttcctcaaaccacggcgctctgtaggaggcaccggcactggcaccaatagcctggagaga
aagggtaatggtccggacacgtaccgtagtctcccccgggatgcaggcacgtgtgccaac
cagagagagttccagagagagacggcccgctcctccttgagcgccaaccaccccatggta
gaccgctggctggagagacgggagcaggatgaggaggaggaggagaacagcaggatcgag
ccgattggccgagctgattcctgtatggaccacacccctctgaggtccctagatgacatt
gtaaagctggtagaagtctccaatgatggcgggcccttggggatccatgtagtacctttc
agtgcccgggaccgcaggactctaggcctgttggtcaagcgcctggagaggggaggcaag
gcgcaggagcaaggtctgttccaggagaacgactgcatcgtacgcattaataatggagac
ctgcggaacatccattttgaacaagcccagaacatgttccgccaggccatgcgttccccg
gtcatcatgttccacgtggttcccaacctgatgaaggcccagtacgagcagctgtcacac
agcgagaggaaccccaacgtggcctactcctctggacgcttcagccccgactccctagct
agcgagagaggcagcaccacctcaggcctggaccacaccccacagtcccgtggtccccat
ccccacccggagcagggagacgcctacacccctctaccccacccccatgggggctccatg
ggcaagcccccatccggccacgccccctcccctcacagggtgctaaactcaacccccacg
gcgggcttcaccaaaaaggttggcaggagactcaacatccagctcaagaaaggtccagag
ggtctgggtttcagcatcacttcgcgtgacgtccccatcggcggctcggcgcccatctac
gtgaagaacatcctgccccgaggagctgccatccaggacggacgcctcaaggctggagac
aggctgctggaggtgaatggagtggacttggttggtcggacccaggaggaagtggtcgct
ctgctgagggccacgcctatgggaggagctgtggggctggtggtgctacgacaggaggag
accttcctgaatgcagagcctcagatgcaaagccccagagatttgaaggttgaggaggat
gacctggtgttgacccctgacggtaccagggagttcctgacctttgagatccctctgagt
gactcggggtcggccgggttaggggtcagcgtcaagggcaaccgctccaaggagaaccat
gctgacctaggcatcttcgtcaagtccataatcaatggaggagctgcctgcaaggataga
cggctgcgggtcaacgaccagctgatagcggtgaacggcgagtcattgataggcaagacc
aatcaggaggccatggagacgctaaggaagtccatgtcggtggagggcaacaaacgcggg
acgattcagctgatagtggccaggagggtcaccaaacgcagtgagctggaggcccctggg
agccccctgggaccggagcagaccctcctgaactcctccctgctggacgaccgggagcgc
cgtatctcccactccctgtacggaggcatagagggcctggacgacaacctgatgccacag
caggctctgatgggcaggatgatgggtaactaccagctctccccaacggtcaacatgccc
caggacgacactgtcatcatcgaagacgatcggccacctgtacttcctgcccacctctct
gaccaatcgtcttccagttcccatgacgacatggggttccatgtggaggtccctccaact
tgggccaaagatactccaattcagaatgagagcaccctgagccctgatgacaccgaccca
gatggagcctttcagagggagggtttcggcagacagagcatgtcagagaaacggacaaag
cagtttggagatgccagtcagctggaaatcatcaagacacgcaagtccaagagcatggat
ctagtagccgacgagattaacctcacccctcgcaaagagaacacaccagggtcttccacc
agggacgtgggtccctcccttggcctcaagaagtccagctctctggagagtttacagacc
gccgttgccgaggtgacgctcaatggtgacatgcccttccacaggccacgcccacgcata
atcagggggcggggctgtaacgagagcttccgggccgctattgacaagtcttacgacagg
ccagcagccaccgaggaggacgacgagggcatggagacattggaggaggacaccgaggag
agctctcggtccgggcgcgactctgtgtccactgtggcagatctgaccccactgcccaac
acagagagaccgctggccaatggcaaccgcgccaatgaagacaagaagaaggacaaagga
gggaaagacaaaaagaagccagaccgggacaaagagaaggacagcaagaacagggctaag
aaaggcatgctgaaaggactgggcgacatgttcaggtttggaaaacaccgcaaggacgga
gagaaactagagcgcaaagggaggctggaggagctgcaggcctcagaagaagagacactg
aggatgaaactagaacaggagaggatccaggctaagacccgggagctgcgggagcgccag
gcacgggagagggactacgctgagatcctagatgtcaacctgtgccgagacgaggagcac
ccctacgcaggcatcgggcccctggacacgtccctggacagcgggcacagccggccccag
agcccccgagacaaccaccatcaagattcctccctgtacacacaagtcggcaaaacccgc
aatgcaaatggacgccctccctccgccgacagcaacagactagcgcctagcaaccacgac
cggatacagcggctgagacacgagttccagcaggccaggggagacgacgaccctgacgac
cggagacgcacctacagcttcgagcagccctggcccaacaacaccaacacaggcccaagc
ccgtaccagacagacggacaacagacaggccgacactctgtgtctgtagaggtgcagaga
cagagacagaggcaggaggagagagacgccttccaacaggcgcagagacagtacagctcc
ctgccacggcaacccaggaagaaccccagctccatctcgcaggactcctgggacaaggtc
tacccgccgggcgatggcttccagacggccaaggagaaccctcgctactctagctacaag
ggctccagaaacggctacccggggatgagcggagtgaatgcccgcgtcctcctggaggcc
caggagctgctgaggcaggagcagagacgcagggagcaggaggccaaagggaagcagcta
ctgctagcgcccccgcaggaacaccccgggaacaacacctatgacgggtactcggctcac
aaggaccctgtgtcgcctaagggcccctatagacaggacgtacccccctcgccctcccag
ctggccaggctcaacaagctgcaggggcccgagaagggaaggcccttctactcctga
DBGET
integrated database retrieval system
