Oncorhynchus kisutch (coho salmon): 109874551
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Entry
109874551 CDS
T09179
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109874551
04091 Lectins [BR:
oki04091
]
109874551
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109874551
Lectins [BR:
oki04091
]
C-Type lectins
Others
109874551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Ion_trans
Lectin_C
GPS
Motif
Other DBs
NCBI-GeneID:
109874551
NCBI-ProteinID:
XP_031671591
Ensembl:
ENSOKIG00005047587
LinkDB
All DBs
Position
LG3:64910234..64937931
Genome browser
AA seq
2383 aa
AA seq
DB search
MDSTKLSVLLLNAFLLSLSCAEDEIAPLSCPEYQESFDGSCYEFVGPPRLRSFLSAQGWC
ERGGGHLAFILNDETQQFLQKHLQTEQDWWLGLAPASPNLTLDSAAAEGPLSWLDGSDVS
YSNWVNDPDPGAGCGHILRSSGFQWEATSNCSQELHFICQFESGRSIACAAHNATLQCGS
GQVIEIDDSFYGRKTVHYCRTSPTSSATSTQEECSWIDVVDSVTGDCHGLQACQATADVA
SFGEPCPGLGSYLSVEYNCKDGLHLLMSKLAAVFDNVSITVKWLLHPFQGNLTCTLSAGD
GHNIDPYSPEELESSVVHKYTRPGVFLVGVECTTSEWHVTAQKAITIQEPIGEFGVIKCY
SMNQSTDGANCKALYGSPIQIQVEVEAGTNVTYKVHRGEMLVANSSAVRGIVPHNITVGP
EVEQQLGSGCHQLTLHASNGVSVLGVSTELQVCLLEPVEGLLGSVMAEEGECPDSDLYVT
VSLDRGSPVQLLFQVSGANDSISETRGMQNRSMQVYNISTTILTGALQVKVRAWNVFSHM
DVDVGNTAAVCHNKSDFQTEEHKRLPRANVEITSDPESPSDFTQSVTLGLTGLSGVLGIS
EPGILLEWECSKTTSGVVKYTIQIPGVATLAPVATNIPPATLPAATTVLPAVTTRPAATT
IPVATTIAATTTVSVTVPERTAPTPITSLHSCVISPQSGTVLDAFNITCATTSCSTGKCQ
YCFKTDNDKHLRCSYGNEVKSIFLPLGNKSYNYSLSVVVILTNGDRKTNATITTEVWPAN
SSSSVENLQSVVENTVAQLQQQGLLTGETLGQMFKSVSDILNKGSSEDQKGAREELREQM
LSTMTAVLKNVPNNTPQEVQLTARAVAGITKRREEVNSAAQLEASSLVAELSSSLLYMNV
SEHGGQEMVQAATPIVEAASNILGVSSNASTQRKVSKTLLNSMDNVQSALLNGKKVGQEP
AIIKSPEISVYANRMSPNSIQMQSINIPDSSSASFSFPPLGADVLSPEEPVDVRMLSFEK
NPYSWSEGGNISGAMGSVTLTRQDGSAIPVENLSEEIEILLPRLEGGQVNSTILELGNYS
TLMIDVPSPDITLVLKMEPSEDIPFVLLLGYKDYPKDKQYVAKTQMPHQGHSQERYTWVL
GPNDLTGKVGVHYLVVRPIVEAGVKSVNATVTVTSIAAQCKYWNETLSTWSEDGCRVGPL
TTSLVTQCLCNHLTFFGSSFFIMPNLVDVSRTAELFATFSDNPVVVCFVGAIFIAYLLVV
VWARRKDIKDIAKVKVTLLEDNDPLAEYRYMLNISTGHRRGASTSSQVTVTLLGTEGESE
PHHLADPDKPVFERGAVDTFLLTTPFSLGELQSIRLWHDNSGGHPAWYINKVTVQDLETG
QKWHFLCNSWLAIDMGECILDKVFPVASDIDLKKFSNLFFMKTAKDFRDGHIWFSVISRP
PTSTFTCVQRVSCCFSLLLCTMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGVQSSI
IMFPINLLIVSIFRNTRPRETKPGKPKAEQQGKTGRVTPSQPPSPQRERELTPDTVIKDI
KKIAQSLSKAMKSPIPHLELEMKPGQQTDINSLLSLVEDIIRQQNRASGEFYTDASKKEG
PLILSLGVANLQETSLCGSPEKTGDGRQKRSNNSQYLYRQLRHVEKELSLLGPSRFPNPD
SYCRAVQQVQGMRGLLESHLSSSSLGGDQLSQSPSPAESSEGDSSSKKQGGLPWWFVFIG
WILVLATSGVSGYFTMMYGLTYGKDRSISWLISMVVSFFESLFITQPLKVLGFAAFFALV
LKKVDQEEYGDAKFEGELRNPDDPDVVRAVRRDSTCSFYQPPPPTDIERMRSNMIKEQKV
FALIKEILTYMGFMWMLLLVAYGQRDPNAYFLTQHIRQSFSQGISDSMSHKDVFTWANTS
LLSNLFGEYPGFITDGNSKLVGNARLRQVRVQKNSCRIACSMRQAVPDCHAPYSWEVEDM
GSYGPGWNRSASENTSKTLHSPWQYQTQAKLRAQPTWGSVVLYRGGGFVVDLGPESQNAS
STLQYLFDNTWLDMFTRAVFVEFTVYNANVNLFCTVTLMLETTAVGAFQFRSELQSVRLY
QSTGGLHIFVMASEVIYFLFILYYMYVQGKLMKLQKWAYFKTKWNLLELAIILLSWSALS
VFIKRTLLGNRDMEYYHNHKDQFASFHETATADAVLGYLIAFLVLLATVKLWHLLRLNPK
LHMITATLQRAWTDISGFLVVITIMFLAYSIASYLMYGWKLYSYRTLLDAALTMVSLQLG
IFNYDEVLDYNPVLGAFLIGSCIIFMTFVVLNLFISVILVAFTQEQIHHKPSEEEEIVDL
MLMKLCSLFGIKMKKEEKEDSDSPKENGMTASATNKGFSTISS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atggacagcactaagctctctgtattactcttgaatgctttcctcttaagcctgtcttgt
gctgaggatgagatagcacctctatcctgcccagagtaccaagagagctttgacggctcc
tgttatgagtttgtgggtccacctcgtttgcgttccttcctcagtgcacagggttggtgt
gagcgaggtggtggacacctggccttcattttaaacgacgaaacccagcagttcctacag
aagcacctgcagacggagcaggactggtggctgggtctggcacctgcctccccaaaccta
acactggactctgctgctgctgagggtcctctctcctggcttgatggctctgacgtcagc
tactctaactgggtgaacgaccctgatccaggggctggctgtggtcacatactgaggagc
tcagggtttcagtgggaggcaacaagcaactgtagccaggagctgcacttcatctgccaa
tttgaatctgggcgctccattgcttgtgctgcccacaacgcaacactacagtgtggttct
ggtcaggtgatagagattgatgacagcttctatggtcgtaagacggttcactactgccgg
acaagtcccacttcttcagccacctccacacaggaggagtgtagctggatagatgttgta
gattcagtgacaggagactgccatgggctgcaggcgtgccaagccacggcagatgtggcc
tcttttggtgaaccatgcccagggcttggaagctacctgtctgtggaatacaactgcaaa
gatggtctccacttattaatgagcaagttggctgccgtctttgacaatgtctccataaca
gtgaagtggcttctccatcccttccagggcaacctgacctgcactctaagtgctggagat
gggcacaacatcgatccttatagtccagaagagttggagagcagtgtggttcataaatac
acccgtccgggtgtcttcctagttggggtggagtgtaccaccagtgagtggcatgtgaca
gctcagaaagccatcaccattcaggagcccatcggggagtttggtgtcattaagtgctat
agcatgaaccaatcaacagatggagcaaactgcaaggccctgtatggcagtcccattcaa
atccaggttgaagtagaagctggtacgaatgtgacctacaaagtccaccgtggtgagatg
ttggtggccaattcatcagcagtcagaggaatcgtcccccacaacatcacagtgggacca
gaggtggagcaacaactgggctctggctgccaccagctgaccctgcatgcctctaacggg
gtctcggtcttgggcgtgtccactgagctgcaggtgtgtctgctggagccagtggagggc
ctgctgggatcagtgatggctgaggagggcgagtgtccagactcagacctctacgttact
gtctccctggaccgggggtccccggtgcagcttctcttccaggtgtctggagccaacgac
agcatctccgagaccagaggcatgcaaaacagaagcatgcaggtttacaatatctcaacc
actatccttacaggagctttgcaagtgaaagtcagggcctggaatgtcttctcacacatg
gatgtggatgtggggaacacagcagcagtttgtcacaataaatcagactttcagacagag
gagcataaaaggcttccccgggctaatgtggaaatcacttctgatccagaaagtccatct
gacttcactcaaagtgtcacacttgggttaactggcttgagtggagtactcggaatcagt
gaacctggaatactacttgaatgggaatgcagtaagacgacatctggcgttgtcaagtac
accattcagataccaggtgttgcaacacttgcacctgttgccactaacataccgcctgct
accttaccagctgctaccaccgtcctaccggctgttactactcgtccagctgctactaca
atacctgttgctaccaccatagcggcaactactactgtatctgtaactgtacctgaaaga
acagccccaactcccatcaccagcctccattcctgtgtaatttcccctcagtcaggcaca
gttctagatgctttcaatatcacctgtgcaacaacctcctgctccacaggcaaatgccaa
tattgtttcaaaactgacaacgataaacatttgcgctgcagttatggaaatgaagtaaag
tcaatcttcctacctctcgggaacaaaagttacaactacagtctgtctgtggtggttatt
ctaacaaatggggatagaaaaaccaatgccacgatcaccactgaggtgtggccagccaac
tccagttcctcagtggagaatctgcagtctgtggttgagaacactgtcgctcagctacag
cagcaggggttgctcactggggagactctaggacagatgttcaagtctgtgtctgacatt
ctgaacaagggctccagtgaggatcagaaaggtgccagggaggagctgcgagaacagatg
ctgagcaccatgactgcagtgctgaagaatgtccccaacaacactcctcaggaagtgcag
ctgacggccagagcagtggcagggatcaccaagaggagggaagaggtcaattccgctgct
cagctagaagctagctccctggtggcagagctcagctcttccctcctctatatgaatgtc
agtgagcatggtggacaagagatggtgcaggcagctacaccaattgtagaggcagccagc
aatatcctgggagtctcttcaaatgcaagcacacagagaaaggtctcaaagactctcctg
aacagtatggacaatgtgcagagtgcactgttaaatggtaaaaaggttggccaggagcct
gccattatcaagagccctgagatcagtgtgtatgctaacaggatgtctccaaatagcatt
cagatgcagtctataaacatcccagatagctcatctgcaagcttttccttccctcccctg
ggtgctgatgtcctttctccagaggaaccagtggatgtgcgaatgctgagttttgagaag
aacccttattcttggagtgaggggggtaacatcagtggtgccatggggtctgtgacactc
accagacaggatggatcagccatccctgtggagaacctgtctgaggaaattgagatcctc
ttgccgagacttgaaggcgggcaggtaaacagcacaatccttgaactgggaaactacagc
acactgatgattgacgtcccttcaccagacataacactggtgctaaagatggagccctca
gaggacataccatttgtactgttgctggggtataaagactacccaaaggacaagcaatat
gtagccaagacgcagatgcctcatcaaggccattcacaagagagatacacctgggtcctg
ggtcccaatgatttgacaggaaaagttggggtgcattaccttgtggtgaggcccattgta
gaagcaggggttaaatctgtcaatgccactgtgactgtcacctccattgctgcccagtgc
aagtattggaatgaaaccttatccacctggagtgaagatggctgcagggttggtccttta
accacgtcattggtcactcagtgcttatgtaaccatttgaccttcttcgggagctctttc
ttcatcatgcccaaccttgtggatgtgtcccgtaccgctgagctctttgccaccttctca
gacaaccctgtggtggtgtgctttgttggtgccatcttcattgcttatctcttggtggtc
gtgtgggcacgcaggaaggacatcaaggacatagccaaggtgaaggtaacattgttggaa
gataatgaccccttggctgaataccgttacatgctgaatatcagcactgggcatcggcgt
ggtgcttccacctcctctcaggttactgtgactctgctgggcacggagggagagagtgag
ccacaccacctcgctgaccctgacaagcctgtgtttgagaggggtgcagtggatacgttc
ctgttgaccacacccttctctctgggggagctgcagagcatcaggctgtggcacgacaac
tcaggggggcaccctgcctggtatataaacaaagtgacggtgcaggatctagaaactgga
cagaagtggcacttcctgtgtaactcatggctggccatagatatgggcgagtgcatcctt
gataaagtcttccctgttgcctctgacatagatttgaagaaattcagtaatctgttcttc
atgaaaacggcaaaggatttccgtgatggccacatctggttttctgtgatcagccggcct
ccaacgagcaccttcacatgtgtccagcgagtctcctgctgtttctctctgctgctgtgt
accatgctgaccagcatcatgttctggggcatccctaccgacccctctgagcagaccatg
gacctgggtcatatcgagttcacctggcagcaggtgatgatcggcgttcagagttcaatc
ataatgtttccaattaatctcctcattgtgagtatcttcagaaacacccgcccccgagag
acgaagcctggaaagcccaaggcagagcagcaggggaagactggcagagtgactccttca
cagcctccgtccccacagagggagagagaactcacaccagacactgtcataaaggacata
aagaagattgctcagtcactctccaaggctatgaagagccccattccacacctggagtta
gagatgaagcctggacaacaaactgatatcaactctctgctctctctggtggaggacatc
atccggcagcagaaccgagccagtggagagttctacactgatgcctccaagaaagaggga
ccgctcattctctcactaggggtagccaatctgcaagagaccagcctgtgtgggagccct
gagaagactggggatgggagacagaaaaggagcaacaacagccaatatctgtacaggcag
ctacgccatgtagagaaggagctgagcctactgggaccttctcgcttccccaacccagac
agctactgccgggcagtgcagcaggtccaaggcatgagggggctgctagagtcccacctc
tcctcttccagcctgggaggggaccagctgtctcaaagccctagcccagcagagagcagt
gagggagacagcagtagtaagaagcagggcgggctgccctggtggtttgtgtttattggc
tggattctggtgttagccaccagcggagtatcaggatacttcaccatgatgtatgggttg
acctatgggaaggaccgctctataagctggctcatctccatggtcgtgtctttctttgag
agcctctttatcactcagccgctgaaggtgcttggttttgcagccttctttgctctcgtt
ctaaagaaagttgatcaggaggagtatggggatgcaaagtttgagggggagctacgaaac
ccagatgaccctgatgtggtgcgggctgtcaggagggatagcacatgcagcttctaccag
ccccctcctccaacagacatcgagaggatgaggagcaacatgatcaaggagcagaaggtc
tttgccctcatcaaagagattctcacctacatggggttcatgtggatgttgctcctggtg
gcatatggccagcgggaccctaatgcttacttcctgactcagcacattcggcagagtttc
agccaagggatctcagacagcatgagtcacaaagatgtgttcacctgggcaaatacctct
cttctcagcaacctcttcggagagtacccaggtttcatcactgatgggaactccaaactg
gttggtaatgcccgacttcgccaggtgagggtgcagaagaactcctgccgcatcgcctgc
tccatgcgccaggctgtacctgactgccatgctccatactcatgggaggtggaggacatg
ggctcctatgggccaggctggaaccgctctgcgagcgaaaacacctcaaagaccctccac
agtccctggcagtaccaaacccaggccaaactcagagcccaacccacctggggcagtgtg
gtcctctacaggggaggggggtttgtggtggacctgggcccagagtcacagaatgctagc
agtacccttcaatatctgtttgacaacacctggcttgatatgttcacccgagcagttttt
gtagagttcactgtgtacaatgccaatgtcaacctcttctgcactgtcacactcatgctg
gagaccacagctgtaggagcgttccagtttcgcagtgagctgcagagtgtccgactatac
cagtccaccggtggactccatatctttgtcatggcatctgaggtcatctatttcctcttt
atcctctactatatgtatgttcagggaaagctgatgaagctgcagaagtgggcttacttc
aagacaaagtggaacctgctggagctcgccatcatcctcctgagctggagcgcgctgtct
gtcttcattaagaggaccctgttagggaaccgggacatggagtactaccacaaccataaa
gaccagtttgccagtttccatgagacagccacagcagatgcagtgctggggtatctgatc
gcattcctggtgctactggctacagtcaaactgtggcatctgctgaggctcaaccccaag
ctacacatgatcacagccacactgcaacgggcctggactgacatatcaggcttcctcgtg
gtcatcaccattatgttcctggcctattctatcgcttcttatctaatgtatggctggaag
ctgtactcatataggactctcctagatgctgctctgaccatggtcagcttacaactgggc
atcttcaactatgacgaggttcttgattacaacccggtgcttggtgcgttcctcatcggc
tcctgcattatattcatgacctttgtggttttaaacctgttcatctcagtcatcctggtg
gcgttcactcaagagcaaatacatcacaagccctcagaggaggaggagatagtggatctg
atgctgatgaagctctgcagcttgtttggaatcaaaatgaagaaggaggagaaagaagac
agtgacagccccaaggagaatggcatgactgcctcagcaactaacaaaggattctccact
atatcctcatag
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integrated database retrieval system
