Oncorhynchus kisutch (coho salmon): 109874673
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Entry
109874673 CDS
T09179
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109874673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109874673
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109874673
GBAF(ncBAF) complex
109874673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
109874673
NCBI-ProteinID:
XP_020322279
Ensembl:
ENSOKIG00005020593
LinkDB
All DBs
Position
LG30:complement(25208353..25224678)
Genome browser
AA seq
436 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPTGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGVPGPQPPHGHNMPSEGMVSGGPPAPH
MQSQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGSMNMPPSSHGSMGGYNHAVPSSQSMP
AQGQMNMTQGPMGNYGPRPNMNMQANQGPMMHQQPPSQQYNIPPGGGGQHYQGQQNPMGM
MGQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGGLLQPPFPDQGF
DPSEQYYQGERDPAANQQSPYEKDNERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPPQQ
QGYPPQQQYPGQQGYPGPQQGYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQ
RPYPGYDQGQYGNYQQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcatagacaacgtggaaagggtgatataacacccactgga
attcagaagttactggatgaaaacaatcagttgattcaatgtataatggacttccagagc
aaaggaaagacagcagaatgttcacagtaccagcagatgctccacagaaatttagtttac
ctggccacaatagcagactccaatcagaacatgcagtctctgctccctgctcctcctact
cagaacatgcccatgggccctggtgggatgaatcagagcggagtgccgggcccccagccc
ccccacggacacaacatgccctctgagggcatggtcagtggcggacccccagccccacac
atgcagagccagatgaacggacagatgcctgggcctaatcacatgccaatgcagggccct
gggccgggtcccaaccagccccccaacatgcccggcagcggctccatgaacatgcccccc
agcagccatggctctatgggcggctacaaccacgctgtgccctcctctcagagcatgcct
gcccaaggtcagatgaacatgacccaaggacccatgggtaactacggcccccggcccaac
atgaacatgcaggctaaccaaggccccatgatgcaccagcagcctccctcccagcagtac
aacataccccctggaggtggcgggcagcactaccagggccagcagaaccccatgggcatg
atgggccaggggaaccacgtgatggggcagaggcccatgcccccttacagacccccacag
caaggaccccctcagcagtacccagggcaggaagactactatggggaccagtacagtcac
gcaggacagggagcctcagaaggtggtttactacagccaccgttccctgatcaaggcttt
gatccctcagaacaatactaccaaggagagcgagacccagcagccaaccaacagtccccc
tatgaaaaagataatgagcgagacccagcagccaaccaacagtccccatatgaaaaagat
catggtaatgcccagtatggccagcagcaggaggcctaccagcaaggtcctccccagcag
cagggctaccccccacagcagcagtaccctggacagcagggctaccctggaccgcaacag
ggctacggtccgtcccagggagccccaggccagtacccccagggttacccccagggccag
gggcagcagtacggggcctaccggggcccccagcccggcccccctcaggcccagcagcaa
cgcccatacccaggctacgatcagggtcaatatggaaattaccagcaatga
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integrated database retrieval system