KEGG   Oncorhynchus kisutch (coho salmon): 109874866
Entry
109874866         CDS       T09179                                 
Name
(RefSeq) RNA-binding protein MEX3B isoform X2
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109874866
   04121 Ubiquitin system [BR:oki04121]
    109874866
Enzymes [BR:oki01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109874866
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109874866
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109874866
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 KH_BICC1_1st KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Mito_fiss_reg Prok-RING_4 zf-RING_5
Other DBs
NCBI-GeneID: 109874866
NCBI-ProteinID: XP_020322489
LinkDB
Position
LG30:complement(35479102..35487411)
AA seq 644 aa
MPSPLFHPEIMDHDMVVSSQHNGVSLPRETDQESRDEGHQEVLRFAMDQLSLMALEKVDC
GGGGGGHVDPLDENQGPVSENCNGGYVNLQLLEHPGGSRESPTSCSPSPEYYGSGGYHMA
GPHSHSMLGEQNSIICNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKT
PVRGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGATGTGAPGTGGAIPGPP
HLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVD
RAREEIETHITLRTGAFVDLQGDNDFHTNGTDVSLEGLGSLGAALWSRANNHHAAPPPPP
PPPPPPLPLAMHHSSGRKLSSLASYHQHKGGMGSESYSAPRRATEGDSPTSPFSTGSSSA
GGGGFTPGLPSEELGFEFSAANIWAPFVNGGGGKVPGSSQQQPLRRNSSGLSGGAITPRL
SPTLPPDAVVGPLDHPMARRAQSDPLSALSWLQSGGTVAGTISGGSSSSSGGSSTGYSSC
SASSLPGGSPTDSEGGGSGVGLASGMLGRLKPAAGSGAGGLIGVGPGGGSRDCFVCFESE
VTAALVPCGHNLFCMDCAGQICQSAEPECPVCHIPATQCIRIFS
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgcctagccccttattccaccccgagattatggaccacgacatggtagtgagcagccag
cacaacggggtcagcctgccccgagaaacggatcaggagtcccgggacgagggccatcag
gaggttctccgcttcgccatggaccagctgtcacttatggccctggagaaggtggactgt
gggggcggtggtggagggcacgttgacccactcgacgagaaccagggtccagtctccgag
aattgcaacggcggttatgtcaacctgcagttgctggagcacccaggaggctcccgggaa
tccccgacgtcctgctccccgtctccagagtactatggatcgggcgggtaccacatggct
ggcccgcactctcactccatgctcggggaacaaaactcgattatctgcaatcgtaaaagg
agtgtcaacatgaccgaatgcgtacctgtgcccagctccgagcacgttgctgaaatagtg
ggaagacaaggctgtaagatcaaggcactgcgtgcaaagaccaacacctacataaagacc
ccggtgaggggcgaggagcctgtgttcattgttacagggcgcagggaagatgtggagatg
gccaagcgggagatcgtctcggcggcagagcacttctccatgatccgggcgtcccgctgc
aaggctggggccacgggcacaggagcacccgggacggggggagcaatcccaggaccccca
cacctgcctggacagaccaccatacaggttcgggtgccataccgtgtggttgggttagtg
gttggtcccaagggggcgaccatcaagcgtatccagcagcagacccacacctacatcgta
acacccagccgggagaaggaccctgtgttcgaggtgacgggcatgccagagaatgtggac
cgagcccgggaggagatcgagacgcacatcaccttgcggaccggggccttcgtggacctc
cagggagacaacgactttcacaccaacggaaccgacgttagcttagagggcctgggctcg
ctgggcgctgctctctggtctcgggccaacaaccaccatgctgcccctccacccccacct
cctcctccaccaccgcccctcccgctggccatgcaccactcatctgggaggaagctgtcc
tccttggcctcctaccatcaacataagggagggatgggctctgagagctacagcgccccc
aggagggccacagagggagacagcccaaccagccccttcagcacaggctccagcagtgct
ggaggaggcgggttcacccctggccttccctctgaggagctgggctttgagttcagcgcc
gccaacatctgggcacccttcgtcaatggaggaggagggaaggtcccaggctcctcccag
cagcaacctctccgccgaaacagcagcggcctgagtggaggcgccatcacaccccgcctg
tcccccaccctgccccctgacgccgtggtgggacccctggatcatcctatggcccgccgg
gcccagagcgaccccctcagtgccctctcatggctgcagtcgggcggtactgttgcaggg
accatctccggaggatctagctccagctccggaggctcatccaccggttactcctcctgc
tcagcctcctccctgcccggaggctctcccacagactcagagggcgggggcagtggagtg
ggcctggcctctggcatgctgggccggctgaagcctgcggcaggctctggggctggaggt
ctgattggtgtagggccagggggcgggagcagggactgttttgtgtgctttgagagcgag
gtgacagcggccctggtgccctgcggccacaacctcttctgtatggactgcgccggacag
atctgccagtccgctgagcccgaatgccctgtctgccacatccctgccacacagtgcatc
cgcatcttctcctaa

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