Oncorhynchus kisutch (coho salmon): 109874891
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Entry
109874891 CDS
T09179
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109874891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109874891
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
109874891
Prokaryotic type
Archaeal type
TFB
109874891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
109874891
NCBI-ProteinID:
XP_020322533
Ensembl:
ENSOKIG00005027130
UniProt:
A0A8C7MLX1
LinkDB
All DBs
Position
LG30:complement(10019933..10031928)
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AA seq
318 aa
AA seq
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MASTSRGDGLALPKVQCPNHPDAMLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNE
KATKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVEQDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaagccgtggagacggcctggctcttcctaaggtgcagtgccccaaccac
ccagacgccatgctggtggaagactacagagcaggggatatgatctgccccgagtgtggc
cttgtagtgggtgacagggtgattgatgtcggctcagagtggaggaccttcaccaatgag
aaagccaccaaagacccgtctagagtgggcgacgcccagaacccactcctcaacggggga
gacttgaccaccatgatcagcaagggaacaggcgcggctagttttgacgagttcggcaac
tccaagtaccagaaccggcggaccatgagcagttcagaccgtgccatgctaaacgccttc
aaagagattaccaccatggccgaccggatcaacctaccaaggaacatcatagaccgaaca
aataacttatttaagcaagtgtacgaacagaagagcctgaaggggcgggccaacgacgcc
atcgcatcagcctgcctttacatcgcctgcagacaagagggcgtgcctcggacgtttaaa
gagatctgcgccgtgtcccgcatctccaagaaggagatcggccgctgcttcaagctgatc
ctcaaggccctggagaccagcgtggacctcatcaccaccggagacttcatgtcccgcttc
tgctccaacctgggcctgcctaagcaggtgcagatggcggccacctacatcgcccggaag
gccgtggagcaggacctggtgcccggcaggagccccatctctgtggccgccgccgccatt
tacatggcctcccaggcctccgctgagaagaagacccagaaagagattggagacatcgcc
ggtgtggcagacgtcacaatcagacagtcgtaccgactcatctacccccgtgcagctgac
ctcttccccccggacttcaaattcgacacccctgtcgacaaactgccccagctgtga
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