Oncorhynchus kisutch (coho salmon): 109874948
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Entry
109874948 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like
KO
K10654
tripartite motif-containing protein 55
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109874948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109874948
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109874948
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
Hex_IIIa
Motif
Other DBs
NCBI-GeneID:
109874948
NCBI-ProteinID:
XP_031666524
Ensembl:
ENSOKIG00005024094
UniProt:
A0A8C7HC20
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All DBs
Position
LG30:complement(18339694..18356724)
Genome browser
AA seq
496 aa
AA seq
DB search
MSISLGYSHSTKQDSTMDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCAQDIFQASNP
YLSTRGTTVTSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQEQESSSSKPEP
EPARCDQPMCEEHEDEKINIYCVTCGVPTCSLCKVFGAHKDCDVAPINTVFNKQKTELTD
CIAMLVGNNDRIQGIMSQLDETCKTVEENGRRQKSNVCESFDHLYAILEERKGDMTLKIN
AEQQEKLDYINGLMRKYREHLENMAKIVETGIQTMEESEMATFLQTAKPLLQKLIAGTNI
SNLDKVERGYDNMDHYAANFERERRALHTIDFVKDDEDDDEFEFEDGEEEVEVSGVKGVT
RTDVSPAAAVAATVGANPPKPQLTSPPPLPQRPTETLGDTATLATPQAPVHATTPVQFPS
LNPTPTASAQARATTPVYFPTSNTTPVQFPNTAPVNFPSADPPTQMSSESGSTQPNTDDK
DGPKHVFSFSWLNNQK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctctctggggtattcacattccacaaagcaagacagcaccatggacagcttg
gagaaacagctcatttgccctatctgtttggagatgtttaccaaaccggtggtcattctc
ccttgtcaacacaacctttgtcgaaaatgtgcccaagatattttccaggcctcaaaccct
tatctatcgaccagaggaaccactgtgacttcaggggggcgtttccgttgcccatcctgc
agacatgaggtggtcctggacaggcatggtgtctatggcctccagaggaacctgctggtg
gagaacatcattgatatgtacaaacaggaacaggagtcctcaagcagcaagcctgagcct
gagcctgccaggtgtgaccagcccatgtgtgaggagcatgaggatgagaagataaacatc
tactgtgtgacgtgtggcgtgcccacctgctctctctgcaaggtgttcggagcccacaaa
gactgtgatgtggccccaatcaacactgtgttcaataagcaaaagactgagttgactgac
tgtatagccatgctagtggggaacaacgacaggattcaaggcatcatgagtcaactggat
gagacctgtaagaccgttgaggagaatggcaggaggcagaaatccaatgtgtgtgaaagt
tttgatcacctttatgccatcttggaggagcggaaaggggacatgaccctgaagatcaac
gcagagcaacaggagaaactggactatataaacggcctcatgaggaagtatagagagcac
ctggagaacatggcaaagatcgtggagacagggatacagacaatggaggagtcagagatg
gctactttcctgcagactgcaaagcctcttctacaaaagctcattgcaggcactaacatc
tccaacctggacaaagtggagcgtggctatgacaacatggatcactacgcagccaacttt
gagcgggagaggagggcactgcacaccatagactttgtgaaagatgatgaagatgatgat
gagtttgagtttgaagatggagaagaggaagtagaagtgagtggagtgaaaggggtgacc
cgtacagatgtctctcctgctgctgcagtggcggcaacggttggggccaaccctccaaag
ccccagctgacatcacccccacccctgcctcagagacctactgaaaccctaggtgacacc
gctacactggccactccacaggcccctgtccatgcaacaaccccggtacaattcccatcc
ttaaacccaaccccaactgccagcgcacaggcccgcgccacaaccccagtctacttccca
acttcaaacacaacaccagttcagttcccaaacacagccccggtcaacttcccatcagca
gacccaccgacacagatgtcctctgaatcgggatcaactcagccaaacacagatgacaaa
gatggacccaaacacgtcttctccttttcttggctgaacaaccagaagtag
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