Oncorhynchus kisutch (coho salmon): 109875054
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Entry
109875054 CDS
T09179
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109875054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109875054
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
109875054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_EZ
Cnd1
Cnd3
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
109875054
NCBI-ProteinID:
XP_031672950
Ensembl:
ENSOKIG00005001188
LinkDB
All DBs
Position
LG3:9087801..9128147
Genome browser
AA seq
2534 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLACRDEN
LVSQLAHGLNQVSTEHIELKDNLGSDEPEGDVPALLQTVLSRNPGIFREKNVMQQPMVQQ
YKPIQNSMHGSPAQSANFQQASMSPNPSSRGFVSPQSSSGSRFIPQQNSPVPSPYTPQSP
AGFMQYPHPPSYNQHQQIQQASPMVPGGMRNIHESKGPMTNAAHHHPDRQEDYMSIVHRL
GNEESDPSMRNASFPLRSPQPGCSPVGNEGTPKAGSRPPLILQSPPYMSPREGPPDLLLE
SPDQRKKQQKKKLVGKEDKDAYDIVTSPSKDTTKLTLSLSRVKSEEVEDPSGELLPVMMD
QNSDLEGELGCQQVPVLHNVGVIKGQEGPLSSPFDEAELDALAEIERIERESASERERCS
KEVQDKDKPLKKRKQDSFPLEPGAGGTAGTTGAPGSGGGGNAGKLIPQEATAAGNGASRP
ALMVSIDLQQAGRADGQLDPCMAAPIPALEAQRWPEEPAEGPAAEGSDTAGVLRLKADNR
PEVIKNSMDKHDNHREPSRHRHDGKQDRRPDTPKSSSREHGRDRERRHRNEDRRSPEERY
RPDSPRVKQEGRGGGFDPSGRPRSDRPGFRSPSGGEAARNRPDGLKQLQPERKSGEFPAY
LLGGQGSGGLKNFVIPKMKRDGGAVDVAEGWGQPRVKLERLGVRGLVDHISKRPKPVVVL
QKLSFDEVQRIIRVKDRHGSKSGKNRFLSGKSGRGGLDQSVLEELPPELLAEMESTMPLC
ERVKMNKRKRSSVKEKPKYTEVDSDDDSNGESARKRQRKNRGDKAWEYEPERERRGSGDH
RRSKGFQEGCRGSNSCYRDSSDEESPPPSMSDIARQMKKKENQKKRKAYEPKLTHQELMD
SSTFKRFSSSVDNILENLEDVDFTQMDDDEIPQELLLGKQQLNELGSESAKIKAMGITCR
IPSDKLVKVLNILEKNIQDGARLSTLMSHDNDEDEEKLWRDLIMERVTKSADACLTALNI
MTSAHMPKAVYMEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAKRAKCST
HKQRVIVMLYNKVCDMVSNISELLEIQLLTDTTILQISSMGITPFFVESVSELQLCAIKL
VTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDRDGEPMYIQMVTALVLQL
IQCVVHLPNDRDGMEDEYDSKVDQDLLITNNYETAMRTAQNFLSVFLKKCGSKQGSEEDY
RPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMTLRVASLDYLGTVAA
RLRKDAVTSKMDQRSIDRILKETQGDDETQQLQKALLDYMEENTETDPSLLFARKFYIAQ
WFRDTTIETEKTMKSQKRDREEDSSDGPGHHAKDIETIGEVMQRAEARKKFLRKIIKTVP
SHFTTLRMNSDTVDYDDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKC
LSEVVSVDPSILSRLDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIE
RILDTGISVRKRVIKILRDICLEQPTFNKITEMCVRMIRRVNDEEGIKKLVNETFQKLWF
TPTPAHDKDTMTRKILNITDVVTACKDTGYDWFEQLLQNLLKVEEDAAYKPAQKACVQLV
DNLVEHILKYEESLTESKGVNSTRLVSCITTLFLFSKIRAQLIVKHAMTMQPYLTTKCNN
ASDFMVICNVAKILELVIPLLEHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVN
KVTHNYKFVWSCFNRYYGALTKLKTQHQEDPNSTALAANKPALLRSLFTVGALCRHFEFD
MEEFKGITKVVIKEKVLELLLYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFSPEVKTLYN
GILADRSTSVNLKIQVLKNLQTYLQEEDSRMQEADQQWKKLSKQEDLKEMGDISSGMSSS
IMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRNK
ADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIMASRKSIIRGFRHDETTSALCAHLFS
MVRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFIADNLACFPYQSQEEPLFIMHHIDITL
SVSGSNLLQTFKESLLKEPRRREPKVRKERQSKNVSGGEEDKEICDSPRSDENSNPDDDD
EVVRRPKKSKRPVAVEEPSSESDLDLEDLDVEDVDRVMRRLPENATSLLDFANASQGILL
LLVLKQHLKNLYSFSDSKIQKYSPTESAKVYDKAVNRKTNIHFKPRQTIDFLSNNWANVV
FTHDIKTRIVKQYLDFKTLMEHLDPDEEDEEGEAAQASANIRNKAINALLGGAGHGHLAP
VEYDEDDESEEDERNPGSSRRARRSGDPGNLNESLDSMDVIAIHCPKHKDRPQLARVIQK
ISTGYSVHWMSGSYSGPWADAKKRDGRKTVPWVDTIKESDIIYKKIALTSNHKLSNKMAQ
TLRSLYAAKEGTSS
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggattgctagccttaca
gacttgttgaatcagctacccctgccctctcctctcccagccaccaccaccaaaagcctg
ctctacaatgggaggatcgcagaggaggtcaactgcctgctggcctgccgggacgagaac
ctggtctcccagctggcccacggtcttaaccaggtttccacagagcacatagagctgaag
gacaacctgggcagtgatgagccagagggcgacgtgccggcactgctgcagacggtgctg
tccaggaaccccggcatcttcagggagaaaaatgtcatgcagcagccgatggtgcaacag
tacaaaccaatacagaattccatgcatggcagcccagcccagtcagcaaactttcagcag
gcttcaatgtctcctaatccatccagccggggatttgtctccccacagtcgagctcgggg
agtcggttcatcccccagcagaacagccctgtgcccagcccatacactccccagagccca
gctggattcatgcagtaccctcacccccccagctacaatcagcaccaacagatacagcaa
gccagccccatggtccctggaggcatgaggaacatccatgagagcaagggaccgatgacc
aacgctgcccaccatcacccagacagacaggaggactacatgagtatagttcacagactg
gggaacgaggagagtgacccctccatgagaaacgcctcgttccctctgaggtcgcctcag
cctgggtgctcacccgttggaaacgaaggaacacccaaagctgggtcaaggccgccactc
atccttcagtctcctccgtatatgtctccccgggaaggccccccggacctgctactggag
tctcccgaccagaggaagaaacagcagaagaagaagctggtgggaaaagaggacaaggat
gcgtacgacatcgtcacctcgccctccaaggacaccaccaagctgacgctgtcgctgtca
cgcgtgaagtcggaggaggtggaggacccctctggtgagctgctgccagtcatgatggat
cagaactctgacctagagggcgagcttgggtgccagcaggtccctgtgctgcacaacgtg
ggggttattaaagggcaggagggccctctctcgtcgccttttgatgaggcggagctggac
gccctggcggagattgagaggatagagcgtgagtcggccagtgagagggagcgctgctcc
aaagaggtgcaggataaagacaagcccctgaagaagcgaaagcaagactcgtttccactg
gagcctggagcagggggcacagcaggcaccaccggtgcgccaggcagcggaggagggggc
aatgcaggcaaactgatcccccaggaggctacagcggcaggaaacggagctagcagacca
gccctcatggtcagcatcgacctgcaacaggcgggccgggccgacggccagcttgaccct
tgcatggctgcgcccatcccggccctggaggcacaacgctggcccgaggagcctgccgag
ggccctgcagccgaaggatccgacacggccggggtgctccggctcaaagccgacaatcga
cccgaggtcatcaagaacagcatggacaaacatgacaaccaccgtgagccatccaggcac
cggcatgacggaaagcaagaccggcgccctgacacacctaagtcatcgagcagagagcac
gggcgggaccgagagaggcggcacaggaatgaagacaggcgctcgccagaggagcgctac
cggccggacagccccagggtcaaacaggagggccgtggaggtggctttgaccccagtggg
cggcctcggagcgacagacccggcttcaggtcccccagcggaggagaggcggccagaaac
cgcccagatggactcaaacaactacagcctgagagaaagtcaggagagttccctgcttac
ctgctgggggggcaagggtctgggggtctgaagaactttgtgatccccaagatgaagcgg
gacggcggagctgtggacgtggcagaaggctggggccagccccgggtcaagctggagcgg
ttgggagttcgggggctagtggaccacataagtaagagacccaagcctgtcgtggtgctg
cagaagctctcttttgatgaggtgcagaggatcatcagggttaaggaccgtcacggctcc
aagtctggcaagaacaggttcctctcaggaaagtcaggcagaggtggactagaccagtct
gtgctggaagagcttcctcctgaactgttggcggagatggagtccaccatgccactgtgc
gagagggtgaagatgaacaagcgtaagcggagttcggtcaaagagaagcccaagtacacc
gaggtcgactcagatgacgattccaacggggaatctgccaggaagcgccagaggaagaac
cggggggacaaggcctgggagtatgagccggagcgggagaggaggggctctggagaccat
aggcggagtaagggcttccaagagggatgcagaggctcaaacagctgctaccgggactct
tctgatgaggagtcgcccccacccagcatgagtgatattgccaggcagatgaagaaaaaa
gagaaccagaaaaagagaaaagcctatgagcccaagctcactcaccaggaactgatggac
tcgtccacattcaaaagattctcctccagtgttgacaacatcctagagaatctggaggat
gtggactttacgcagatggacgacgatgagatcccacaggagctgctgctgggtaaacag
cagttgaacgagctgggcagcgagtcggccaagatcaaggccatgggcatcacctgcagg
ataccgtcggataagctggtgaaggtactgaatatcctggagaaaaacatccaggatggt
gccaggctctcgacactcatgagccatgacaacgacgaagatgaggagaagctgtggcga
gacctcattatggagcgcgtgaccaagtcggccgacgcctgtctgacggccctcaacatc
atgacgtccgcccacatgcccaaggcggtatacatggaggacgtgatcgagagggtactc
cagtacaccaagttccacctgcagaacaccctctacccccagtacgaccctgtctatagg
gtggaccctcacggaggtggcctgctgagctccaaggccaagcgggccaagtgctccacc
cacaagcagcgggtcattgtcatgctgtacaacaaggtgtgtgacatggtcagcaacatc
tctgagctgctggagattcagctgctcaccgacaccaccatcctccagatctcctcaatg
ggcatcacccctttctttgtggagagtgtcagtgagctgcagctgtgtgccatcaagctg
gtgacggcggtgttctcccgctatgagaagcacaggcagctgattctggaagagatcttc
acatctctggccagactgcccaccagcaaacgcagtctccgcaacttcaggctgaacagc
agcgacagggacggcgagcccatgtacatccaaatggttacagccctggtgctacagctc
attcagtgcgtggtacaccttccaaacgaccgcgacggcatggaggacgagtacgacagc
aaggtagatcaggacttgctgatcaccaacaactacgagacggccatgaggacagcccag
aacttcctctcggtgttcctcaaaaagtgtggcagtaagcaggggagcgaggaggactac
aggcctctgtttgagaactttgtccaggacctgctctccacggtcaacaagccagagtgg
cccgctgccgagctactgttgagcctgttaggcagactgctggtgcaccagttcagtaac
aagcagacggagatgaccctgagggttgcctccctggactatctaggcacggtggccgct
cgcctgcgcaaagatgccgtcaccagcaagatggaccagcgatccattgaccgcatcctg
aaagagacccaaggtgacgacgagacccagcaactgcagaaagcccttctggactacatg
gaggagaacacagagaccgacccttcactattgtttgccaggaagttctacatagcgcag
tggttccgcgacaccaccatagagaccgagaagaccatgaagagccagaaacgggaccgg
gaagaggactcgtcggacggccctggccaccacgccaaggacatcgagaccattggggag
gtcatgcagcgggccgaggcacgcaagaagttcctccgcaagatcataaagacggtcccc
tcccatttcaccaccctgagaatgaactctgacacggtggactacgacgactcctgtctc
atcgtccgctacttagcctccatgaggccgttcgcccagagctttgatatttacttaacc
cagatcttgcgagtcctgggggagagtgcaatcgctgtccggacaaaagccatgaaatgt
ctgtctgaggtggtttctgtggatcctagcattctttccaggttggacatgcagcgcgga
gtgcatggccgtctgatggacaactccaccagcgtgcgcgaggcggccgtggagcttctg
ggccgcttcgtgctgagtcgaccccagctcactgagcagtactacgacatgcttatcgag
aggattctggacacgggcatcagcgtgaggaagagggtgattaagatcctgagagacatc
tgtctggagcagcccaccttcaacaagattacagagatgtgtgtgaggatgatccgtcgg
gtcaacgacgaggagggcattaagaaactagtcaacgaaacattccagaagctgtggttc
accccgaccccggcccacgacaaagacactatgaccaggaagattctcaacataacagac
gtggtcacggcttgcaaagacacgggctacgattggttcgagcaactccttcaaaatctg
ttgaaagtggaggaagacgctgcctacaaaccggcccagaaggcttgtgtgcagctcgtg
gacaatcttgtggagcacatcctcaaatacgaggagtctcttacagaaagtaaaggggtg
aactccacgcgcctggtgtcctgcatcaccactctcttcctgttcagcaagatccgggct
cagctcatcgtcaaacacgccatgaccatgcaaccctacctgaccaccaagtgcaataat
gccagcgacttcatggtgatctgtaacgtggccaagatcctggagctggtgatccctctg
ttagagcacccatctgagaccttcctcaccaccatagaggaagacctcatgaaactcatc
atcaaatacggcatgacggttgtccaacactgtgtcagctgcctcggtgccgtggtcaac
aaggtgacccacaactataagtttgtgtggtcttgctttaacagatactatggtgctctg
accaagctgaagacgcagcaccaggaagatcccaacagtacagctctggctgccaacaag
ccggccctcctgcgctccctcttcaccgtgggagccttgtgtcgacactttgagttcgac
atggaggagttcaagggcatcaccaaggtggtaatcaaagagaaggtgctggagctgctg
ctctactttaccaaacatgaggacgaggaggtgaagaccaaggctatcatcggcttaggc
ttcctggtgatcatgcaccctagccagatgttttccccggaggtgaagaccctgtacaac
ggaatcctggccgacaggagcacctcggtcaacttgaagatccaggtgttgaagaacctg
cagacctatctgcaggaggaggactcgcgcatgcaggaggctgaccagcagtggaagaag
ctgtccaagcaggaggacctgaaggagatgggggatatctcatcgggcatgagcagttcc
atcatgcagctgtacctcaagcaggtgctggaagctttcttccacacccagtccagtgtg
cgtcactttgccctcaacgtcatcgcactcaccctcaaccagggcctcatccaccccgtg
cagtgtgtaccgtatctcatcgccatgggaacggaccccgagcccagtatgagaaacaaa
gcggaccagcagttggtggagatcgacaagaagtacaccggattcattcacatgaaggca
gtggctgggatgaagatgtcctaccaggtgcagcaggccatcatggcgtcccgcaagagc
atcatccgaggcttccggcatgacgagaccacctcggccctctgcgcccacctcttctcc
atggtccgagggaaccggcagcaccggcgagccttcctcatctccctgctcaacctgttt
gacgacagctccaagactgaagtgaacatgctgctgttcatagccgacaacctggcctgt
ttcccctaccagagccaggaggagcccctcttcattatgcaccacatagacatcacactg
tctgtgtccggcagcaacctgctgcagaccttcaaagagtctctgttgaaggagccgcgg
cgccgcgagcccaaagttagaaaggagcgccagtcaaagaacgtctctggcggcgaggag
gacaaggagatctgtgactcacccaggagcgatgaaaactcaaaccctgatgatgacgat
gaggtggtgcggcggcctaagaagtccaagagaccggtggctgtggaggaacccagctcg
gagtcggatttagacctggaagacctggacgtggaagatgtggaccgggtgatgcggcga
ctgcctgagaacgccacgtcgctcctggactttgccaacgcctcgcagggcatcctgctg
ctcctcgtgctcaaacagcacctcaagaacctttacagcttctcagacagcaaaatccag
aagtactcgccgactgagtcagccaaagtgtatgacaaggcggtgaacagaaagacaaac
atccacttcaagccccgacagaccatcgacttcctgtccaacaactgggccaacgtggtg
ttcactcacgatatcaagacgaggatagtcaagcagtacctggatttcaaaaccctgatg
gaacacttggacccagacgaggaggacgaggagggcgaggcggcacaggccagcgccaac
atccggaacaaagccataaacgcactgcttggaggggccggccacgggcatcttgcacca
gtagagtatgatgaggatgacgagagtgaagaagatgagagaaaccctgggtcctctcgg
cgggcgagacgttcgggggaccccgggaacctcaacgagagcttggactctatggacgtc
atcgccatccattgccccaagcacaaggaccgtccgcagctcgcccgggtcatccagaag
atcagcacaggctacagcgtgcactggatgtccggctcctactctggcccctgggccgac
gccaagaaacgggacggacgcaaaacggtgccttgggtggacactattaaggagtctgac
atcatttacaaaaaaatcgccttgaccagtaaccacaaactgagtaacaaaatggcgcag
actttacggtcactgtacgctgccaaggaggggacttccagttaa
DBGET
integrated database retrieval system
