Oncorhynchus kisutch (coho salmon): 109875069
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Entry
109875069 CDS
T09179
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109875069 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
109875069 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109875069 (lsm7)
03041 Spliceosome [BR:
oki03041
]
109875069 (lsm7)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109875069 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
109875069 (lsm7)
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109875069 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
GPAT_C
DUF150_C
Motif
Other DBs
NCBI-GeneID:
109875069
NCBI-ProteinID:
XP_020322813
Ensembl:
ENSOKIG00005033425
LinkDB
All DBs
Position
LG30:complement(39957717..39962497)
Genome browser
AA seq
107 aa
AA seq
DB search
MADRNKEGEKKKKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR
DPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaaacaaggaaggagagaagaaaaagaaggagagcatctttgacctgtcc
aagtacattgataaacaaatccgtgtcaagttccagggaggacgagaggccagtggagtc
ctaaaggggtttgaccccctgttgaacctggtattggacagcaccatcgagtacttgcga
gaccctgacgaccagttcaagctgacagaggacacgcgacagctgggcctggtggtgtgt
cgagggacctcagtggtgctcatctgtcctcaggacggcatggaggccatccccaacccc
ttcatccaacagcaggatggatag
DBGET
integrated database retrieval system
