Oncorhynchus kisutch (coho salmon): 109875075
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Entry
109875075 CDS
T09179
Name
(RefSeq) tenascin-N-like isoform X1
KO
K06252
tenascin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109875075
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109875075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109875075
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109875075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
EGF_Tenascin
Pur_ac_phosph_N
EGF_2
Interfer-bind
E217_Gp32
hEGF
Motif
Other DBs
NCBI-GeneID:
109875075
NCBI-ProteinID:
XP_031666050
Ensembl:
ENSOKIG00005035302
UniProt:
A0A8C7J469
LinkDB
All DBs
Position
LG30:complement(20275605..20307381)
Genome browser
AA seq
1032 aa
AA seq
DB search
MTTRLHWLTRALCLISILCTVTSKYVTEDYSSPAEKEVTFSHVYKIDLAKSPECKLALQT
LPSQQDQFSGLQELEGGTTLEGENNIVFRHQINLKTPKCDCDESESFTSLLYRVNGLEEE
VEHLKSQCSQGCCGGKGGGAGGVDTSCSGHGTYQHNTCSCQCNPSWEGPDCSISTCPDEC
NDNGRCVDGKCVCHAGYTGSDCSQLMCPGDCNDKGHCVDGKCVCFSHFTGEDCSEQKCDP
DCIHGTCVNGMCICDEGFFGEDCSTVTGPNGLRLVRVTDNSLLVEWEAVKAAEYYILTWH
PEGNEAELERFTVPNTETSYLITGLSPGVTYIVQVYAVIKEIQSKGDRIEATTEVSGIDG
IRVLGQTEDSIQVDWQNPAAPLDHFRLTYANPDGQEEEQNVPMIAEARTTHTIVGLQPGT
EYLITVQGIKGTIEGKASFATGVTDLDDPTNLLTKEVTEDTATVEWQKVQAEIDGYVITY
SSAEGSSGDISVGADSTSHRLTGLRPGVLYTVYIWAVKGSRVSRKSSTEAETELDVPTNL
LTREVTEDTATVTWDKVQAEIDGYLISYSSAEGSSGEIPVGADSTSYRLTGLRPGVIYTV
YIWAVKGSRVSRKSFVDAETDLDAPTNLFTREVTEDTADVSWDRPLADIDGYLISYSSAE
GSSGEIPVGADSTSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSTEAETEIDAPKNLKASD
VKLNVATLTWTAPLARIDGYILTLRAEDGSLKAVEKKLRAGESSFAMSDLEKGKNYIVTL
LAYRGPKRSRVIEITFKTVGLLYPFPMDCTQIKKNGNVASGIYTIYVNSDRTKPMEVYCD
MDTDGGGWVVFQRRNNGQMDFMKRWRQYMAGFGNMTDEFWLGLDNIYELTNTPTQYELRV
DLGVGSEKAYAVYDNFKIAPAKQKFKLTIGEYSGTAGDAMSYHQGRPFSTVDNDNDIALG
NCALTHRGAWWYKNCHLANLNGKFGDNRHSMGVNWEPWKGHLMSLDFTEMKIRPVGTARK
RRSLRSSTAPRK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagacttcactggctcacaagagccctatgcctgataagcatactgtgcact
gtcacttccaagtatgtgacagaagattattcatcccccgctgagaaagaagtcaccttc
agccacgtctataagattgacctggccaagagccctgagtgtaaactcgccttgcagacc
ctcccttcccaacaggaccagttttcaggcctgcaagagctggaagggggcactactctg
gagggggaaaacaacatcgttttcaggcaccaaatcaacctcaagaccccaaagtgtgac
tgtgatgagtcggagagctttacgtctctgctgtacagagtcaacgggctggaggaggag
gtggaacatctgaagagtcagtgctcccagggctgctgtggtggaaaaggtggtggagca
ggaggtgtggacactagctgtagtggccacgggacctaccagcacaacacctgcagttgt
caatgcaaccctagctgggagggtcctgactgctccatttccacctgtcctgatgagtgc
aacgacaacggccgctgtgtggatggcaagtgtgtctgccacgctggctatacggggagt
gactgcagccagctgatgtgcccaggcgactgcaacgataagggacactgcgtggacggc
aagtgtgtttgcttcagccacttcactggcgaggactgcagcgaacagaaatgcgatcct
gactgcatccacggcacctgcgtgaacggaatgtgtatctgtgacgaaggcttctttggg
gaagactgctctacagtgacgggccctaacggcctgcgtctggtaagggtgactgataat
tctctgctggtggaatgggaggctgtgaaagcagcagagtactacatcctgacctggcac
cctgagggcaatgaggcagagctggagcggttcaccgtgcccaacacagagacctcctac
ctgatcacaggactcagcccaggtgtcacctacattgtgcaggtgtacgctgtcatcaag
gagatccagagcaagggggacaggattgaggcgaccacagaggtgtctggtattgatggt
atccgggtattgggccagactgaggactctatccaggtggactggcagaaccctgcagca
cctctggaccacttcaggctgacctatgctaaccctgacgggcaggaggaggagcagaac
gtaccaatgattgcagaggccaggaccacccacaccatcgtaggactgcaacctggcact
gagtacctcatcacagtgcaaggcatcaaagggaccatcgaagggaaagcctccttcgcc
accggggtcacagatcttgacgatcctactaacctcttgaccaaagaagtgacagaggat
accgctaccgtggaatggcagaaggtacaagcagagattgacggctacgtgatcacctac
agctctgcggagggctccagtggggatatctctgttggggcagacagcacctcacacagg
ctgactgggctgaggcctggagtcctctacacagtctacatatgggctgtcaagggctcc
cgggtcagcaggaagagctccacagaagctgagacagaactagatgttcctactaacctg
ttgaccagagaagtgacagaagacacagcgacagtaacatgggataaagtccaggctgaa
atcgacggctacctgatcagctacagctctgctgagggctccagtggggagatccctgtt
ggggcagacagcacctcctacaggctgactgggctgaggcctggagtcatctacacagtc
tacatctgggctgtcaagggctcccgggtcagcaggaagagcttcgttgacgctgagaca
gatttggatgctcctactaacctctttaccagagaagtgacagaggacacagctgatgtg
tcgtgggacagacctttagcggacattgacggctacctgatcagctacagctctgctgag
ggctccagtggggagatccctgttggggcagacagcacctcctacaggctgactgggctg
aggcctggagtcatctacacagtctacatctgggctgtcaagggctcccgggtcagcagg
aagagctccacagaagctgagacagaaattgacgcaccaaaaaacctgaaagcatcggat
gttaaactgaatgtagctaccctgacctggactgctcccttagccagaatcgatggctac
atcctcacattgagagctgaggatggcagtttgaaggctgtggagaagaagctgagggca
ggagagagcagctttgccatgtcggacctggagaaaggaaagaactacattgttaccctc
cttgcttacagaggaccaaagaggagcagagtgatagagatcacattcaaaacagtgggt
ttgttgtacccattccccatggactgtactcagattaagaagaatggtaacgtggcaagt
ggaatctacaccatttacgtcaacagtgatcgcaccaagcccatggaggtgtactgtgac
atggacactgatggcggtggatgggtggtgttccagagacgcaacaatggacagatggac
ttcatgaagcgctggagacagtacatggctggttttgggaacatgactgatgaattttgg
cttggtctggacaatatctatgagctgaccaatactcccacgcagtacgagctgcgagtg
gaccttggtgtgggttcagagaaggcctatgctgtctatgacaacttcaagatagccccg
gctaagcagaagttcaagctgaccatcggtgaatacagtggaacagcaggcgatgccatg
agctaccatcaaggtcgccccttctccacggttgacaatgacaatgacattgctcttggt
aactgtgccctgacacatcgtggtgcatggtggtacaaaaactgtcaccttgccaacctc
aacggcaaattcggagacaacagacacagcatgggtgtgaactgggagccatggaagggt
cacctgatgtctcttgatttcactgagatgaagattcggcctgtgggcactgccaggaag
aggaggtcgcttagaagcagtacagctcccagaaaatag
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