Oncorhynchus kisutch (coho salmon): 109875078
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Entry
109875078 CDS
T09179
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109875078
Membrane trafficking [BR:
oki04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
109875078
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRR_LRWD1
LRRNT
LRR_6
C2-set_2
V-set
Motif
Other DBs
NCBI-GeneID:
109875078
NCBI-ProteinID:
XP_020322828
Ensembl:
ENSOKIG00005050194
UniProt:
A0A8C7LRQ0
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Position
LG30:complement(35680012..35772156)
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AA seq
622 aa
AA seq
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MTGSPGISGQSLSPWRWLSRWGPVLLLVTMTTLLPGCCQACPPRCECSAQIRSVLCQRRR
LTGIPEGIPTETRLLDLSRNRLRWVEMGDLAPYPHLEEVDLSENLIATLEPNAFANLQSL
RVLRLRANQLKLVPMGAFAKLVNLTTLDLSENKLVILLDYTFQDLRSLRHLEVGDNDLVY
ISHEAFSGLLGVEDLTIERCNLTSISGQTLSSLRSLVTLRLRQLSIPALEDHNFRKLANL
RGLEIDNWPYLEYISPLSFQGLDLYWLSITNSNITSVPSSSFRNLIHLTHLNLSYNPITT
LEPWAFRDLLRLKELIMVNTGLATVEPHSLGGLRQIRVLNFSSNDLQTLEEGSFHSVNSL
ETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGNSLSTFTDSALFDHFTC
QKPKIRNRKLQQVTAREGQPVSFLCSAVGEPAPNIMWISPQRRLITAKSNGRITVLPGGT
LEIRYAQVTDSGTYMCIASNAGGNDTYFAMLTVRGAPLDASSAFFANRSMYGGEFFNDTN
LNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFAWSRGRGQRKNNFTVETPFR
KAEGPAAVGGAGGARKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactggctccccgggcatcagtgggcagtccctgtcaccatggcggtggctgagtcgc
tgggggccggtcctgctgctggttaccatgacaaccctactgccaggttgttgccaggca
tgccctccacggtgtgagtgctcggcccaaatccggtccgtcttgtgccagcggcggcgg
ctcaccggcatcccagagggcatccccacggaaactcgcctcctggacctcagccggaac
cgtctccgctgggtggagatgggtgacctggcgccgtatccgcaccttgaagaagtggac
ctgagtgagaacctcattgccacactggagcccaacgcgttcgccaacctgcagagcctc
cgggtgttacggctgagggcgaaccagttgaaacttgtacccatgggggccttcgccaag
ctggtcaacctgaccacgctggacctgagtgagaacaagctggtgattctgttggactac
accttccaagacctgaggagtctaagacacctggaggtgggagacaatgacctggtctac
atctctcatgaggccttctctggcctgctaggggtggaggatctgaccattgaacgctgc
aacctgacttccatctctggccagacgctgtcttccctacgcagcctggtcactttgcga
ctacgccagctcagcatccccgccctggaggaccataacttccgtaaactggccaacctc
cgggggctggagatcgacaactggccttacctggaatacatctcccccctgagcttccag
ggtctggacctgtactggctgtccatcaccaacagcaacatcacctctgtcccctcgtcc
tccttcagaaacctgatccacctcacccatctcaacctgtcctacaaccccatcaccacc
ctggagccttgggccttcagggacctgctgaggctcaaagagctgatcatggtgaacacg
ggcctggctacggtggagccccactccctgggaggcctcagacagatccgggtcctcaac
ttctcctccaatgacctccagactctggaggagggatcgttccactctgtcaacagcctg
gagacgctgcgggtggatgggaacccactgctgtgtgactgccgtttgttgtggatcctg
cagagacgcaagaccctcaactttgacggcagggtgcctgtgtgcgctgggccggtggag
gtgcaggggaacagcctcagcaccttcaccgactcagcgctctttgatcacttcacctgc
cagaagcccaagatacgcaaccgcaagcttcaacaggtgacagctcgtgagggccagcca
gtgagtttcctctgcagtgccgtgggagagcccgcccccaacatcatgtggatctcccct
cagcgccgactaatcacagccaagagcaatggtcgcatcaccgtcctcccaggagggacg
ttggagatccgctatgctcaggtcaccgacagcggcacctacatgtgcatcgccagcaat
gccgggggcaatgacacttactttgcgatgctcacggttcggggcgcgccgctggatgcc
tcgtcagccttcttcgccaaccgctcgatgtacggcggcgagttcttcaacgacacaaac
ctgaatagcactcgcgtcttcctcaagttcaccctggacctgaccaccatactggtctcc
acagcgatgggctgcatcaccttcctgggcgtggtgcttttctgtttcctgttgttgttt
gcatggagccgggggcggggccagcgtaagaacaacttcaccgtcgagacccctttccgg
aaggccgagggaccggcggcggtgggtggcgctggaggtgcccggaaattcaacatgaag
atgatatga
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