Oncorhynchus kisutch (coho salmon): 109875218
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Entry
109875218 CDS
T09179
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109875218
Ion channels [BR:
oki04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
109875218
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
109875218
NCBI-ProteinID:
XP_031666164
Ensembl:
ENSOKIG00005029204
LinkDB
All DBs
Position
LG30:complement(10947974..11011826)
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AA seq
968 aa
AA seq
DB search
MRHRYAGAVYQHQIPDEERGSVQSQDPNPVAPVFSLPPPPPSFRERSTTTSHYLNHHQLP
CLSKPSRRGIHACQPQHGDPPPLTSYDIAQRPSHRVCEPAGQPAHQQQNLWAAAGSQLQS
EQIFFQSCHCNFSEEASLSHQRQPLAHPPQPSPSLPPSSSLLFLQESNHGDNLQSSDNYQ
QASKVERYRGGGGGGHRDQKQLLQQQQQQHSRLQHRDPSPETTRANSQKGRTINVCESIE
ANRRAFESQTQDLQQLQQLPQLRAQQQLLVGSSFPVYYCANGSGELCRNNQAPLLQQHQQ
DAQGRPQHCDQDRNKPERTNQANQPQHPNQPQHPNQPQHHCRDSRVNSPTQPYGGNSSAT
GRSSKSSPNYGSSYHLWPESPHKGEERILIDHHQATTEQKKLSHAGSSLSESSGRLPQIA
MNTCKHNGGVVRPLGSLASSRHNLAELDSETQPLQTLHSSGLEVVVSKGNSEDPGKASNE
SLVRDGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVY
GKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLE
LLVCAIHPIPGHYRFTWKARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSKLF
TDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDTQE
VTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLELT
KAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIH
QAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEDKLDSV
TGSLQALPCLISQAITQQQQEFLDGFLHRFRPASLGSERSERSERSWTSTARRRRSPSTA
PHTSSDSG
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcgaggc
agcgtgcagagccaagacccaaacccagtcgctcccgttttcagtctgccgccccctcct
ccgtctttcagagagcgttcgactaccacctcgcactacctgaaccaccaccaactgcct
tgtctgagcaagccctctcgaagaggtatccatgcctgtcagccgcagcacggcgacccc
ccgcctctgacaagctacgacatcgcccagcgaccttcacaccgggtctgtgaacccgca
gggcagccagcgcaccaacaacagaacctttgggccgcagccggttcccagctgcagtcg
gagcagattttttttcagagctgccactgcaatttttccgaggaggcgagcctttctcac
cagcgccagcccctcgctcacccgccgcagccctccccatctttgccgccgtcgtcctct
ctgctgtttttgcaggagtctaatcacggggataatttgcaaagcagtgacaattatcaa
caggcgagcaaagtggaacgctaccggggaggaggaggaggcgggcaccgcgaccagaag
cagttgttgcagcaacagcagcagcagcacagcagactccaacacagggacccctcccct
gaaacaacccgagcaaactcacagaaggggcgcactataaatgtatgtgagtcaatcgag
gctaatcggcgagcattcgagtcccagactcaggacctgcaacagctacagcaactccca
caattgcgagctcaacaacagctactggtggggagcagcttccctgtctactactgcgcc
aacggttcaggagagctctgtcggaataaccaggcaccactgctgcaacagcatcagcaa
gacgcacaggggcgtccgcagcactgtgaccaagaccgcaataagccagagaggacaaac
caagccaaccagccacagcaccccaaccagccacagcaccccaaccagccacagcaccat
tgccgcgactctcgtgtaaactcaccaacgcagccgtacggagggaactcgtctgcgact
ggcaggagcagcaagagcagccctaactacggctccagctatcacctgtggcccgagagc
ccgcataagggagaagagaggatactcatcgatcatcatcaggcaaccactgagcaaaag
aagctgagccatgctggatcctccctctccgagagcagcggccgactccctcagatagcc
atgaacacctgcaagcacaatggcggtgtagtgagaccactgggcagcctggcgtcgtcg
cggcacaacctagcagagctcgactccgaaacacagcccctccagacgctgcacagttct
ggcctggaggtggttgtttccaagggaaacagtgaggaccccggcaaggcgtccaacgag
agcctggtcagggacgggaacggtgctcctgtgaagaagaacaaagacatcggctataga
ctcggccaccggagggcgctctttgagaagcgaaagagactcagtgactacgcactcatc
ttcgggatgtttgggattgtcgtcatggtgacggagacggaactgtcctggggagtttac
ggcaaggaatcttcgtactcatttgcactgaaatgccttatcagcctttccactgttata
ttgcttggtcttataataatgtaccatgcccgggaaatccagctgttcatggtggacaat
ggggcggacgactggaggatagccatgacgtacgagcgcatcttcttcatcgtgctggag
ctgctggtgtgcgccatccatcccatcccgggccattaccgcttcacgtggaaggcgcgg
atcgccttcacctacacgccgtcgacagccaacgccgacgtggacatcatcctctccatt
cccatgttcctgcgcctctacctgatcggccgcgtcatgctgctgcacagcaagctcttc
acggacgcctcgtcgcgcagcatcggcgccctcaacaagatcaacttcaatacgcgcttc
gtcatgaagaccctcatgaccatctgccccggcaccgtgctgcttgtcttcagcatctcc
tcctggatcattgccgcctggacggtgcgcgtctgcgagaggtatcatgacacacaggaa
gtgaccagtaacttcctgggagccatgtggctcatctctattaccttcctctccattggc
tacggagacatggtacctaacacgtactgtgggaaaggcgtatgtctgcttacagggatc
atgggagcgggctgcactgcgctggtggtcgccgtggtagccaggaagttggagttgacc
aaggctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacgagtaaag
aacacagctgccaatgtactcagggaaacatggctcatctacaaacacactaagctggtc
aagaagatagatcacgctaaggtgcgcaaacaccagcggaagtttctacaggccatccat
caagctcagaaactacgcagtgtaaagatggagcagaggaaactcaacgatcaggccaac
acgctagtggacctggcgaagacccagaacgtgatgtacgacctggtgtcagagctgcag
gagcgcagcgaggagctagacaagcgcatcggcatgctggaggacaagctggactcggtg
acgggcagcctacaggcgctgccctgcctcatctcccaagccataacccagcagcagcag
gaatttctggacggtttcctgcaccgcttccggcctgcctcgctgggctcagagcgctcc
gaacgctcagagcgctcctggacctccaccgcccgccgacgccgctcgccctccacggcg
ccacacacctcctctgacagcggctag
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