Oncorhynchus kisutch (coho salmon): 109875251
Help
Entry
109875251 CDS
T09179
Name
(RefSeq) cadherin-12-like isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109875251
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Major cadherins
109875251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Stevor
Motif
Other DBs
NCBI-GeneID:
109875251
NCBI-ProteinID:
XP_020323112
Ensembl:
ENSOKIG00005025152
LinkDB
All DBs
Position
LG30:22086858..22110874
Genome browser
AA seq
806 aa
AA seq
DB search
MITRNGLLLVFWFLLDKGFLAPLHAPPQSRMGREQHLRGVEGLGLRRHVASGVQRVKRGW
VWNQFFVLEEYMGSEPQYVGKLHTDLDRGDSDVKYTLSGEGVGTIFTIDQTTGDIHALMG
LDREVKSYYTLRAQAVDMNTGRPLEPESEFIIKIQDVNDNEPKFLDGPYTASVPEMSPGG
TFVMQVTATDADDPSYGNSARIVYSILHGQPYFSVDSKTGVIRTALPNMDREVKELYQVL
IQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSIFHLRVPESSLVGSAVGKIRAHDL
DSEKNAEVEYSIVPGDEGHMFNITYNGHSQEGIIVLSEHLDYETKRSYTFKVEASNAHLD
PRFLHRGPFKDTATVKVNVLDVDEPPVFTKTSYTIDVYEDTPVSTIIGSVTAQDLDASTS
AVRYSIEWKRPVDGCFDIDTVEGTISTTEMLDRESNRQHNIFVVATKVNNPLLSNKVTVT
VNVLDVNEFPPELTILFDTFVCENAKVGQVIQTINATDKDLPTVGQKFFFKSPREIRNRN
FTVRDFGNNTAGIVTKRVGFQRRVQEYYVVPVVVEDSGYPAQSSTGTLTVRVCACETDGS
LLSCTAEAVFLPVGLSTGAVMAILLCMVILLVIVVLYVGLRRQKKRETLMSSKEDIRDNV
VHYDVEGGGEEDTHAFDMGTLRNTKAIKENMLRRGTGSWSDVTTQTEINGSTPTTEGSTN
IIRDYIHQRLQENHLGFSALPYDSLATYAYEGDGSVAESLSSIESWTVDGREDFRYLSEW
GPSFKTLVGILDKDKADPPTAEVEES
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgattacaaggaacggtctgctgttggtcttttggtttctcttggacaaaggtttcctg
gctcccctccacgctccgccccaaagcaggatgggaagagagcaacacctgaggggtgtg
gaaggactgggactgaggagacatgtggcgtcaggggttcagagggtgaagagaggatgg
gtgtggaaccagttctttgtactggaggaatatatgggatcggaaccacaatatgttgga
aagcttcacactgacctggacaggggcgacagcgacgtgaagtacactctatcaggagaa
ggagtcggaaccatcttcaccatagaccagacgacaggtgacatccatgccttgatggga
ttggaccgagaggtgaagtcttactacacgttacgagcccaggctgtggacatgaacaca
ggcaggcctctggagcctgagtctgaattcatcataaaaattcaagacgtcaatgacaat
gaacccaagttcttggacggcccatacacagccagtgtcccagagatgtcaccagggggt
acttttgtaatgcaggtgactgccacagatgctgacgacccctcctatgggaatagtgca
cggatcgtctacagtatcctacatggacagccttacttttcagtcgactccaaaactggg
gttattagaactgcgttgcctaacatggaccgtgaagtgaaggagctttaccaggtcctt
attcaggcaaaggatatgggcggtcagctgggaggactagccggaaccaccaccatcaac
atcaccctcagcgacgtcaacgacaacccacccaggttttcaaaaagtatattccacctc
agggtcccagagtcttcgttagtgggctcagcagtggggaagatcagagctcatgacctg
gactctgagaagaatgcagaggtggaatattctatagttcctggagatgaaggacacatg
tttaacatcacctacaacgggcacagtcaagagggaatcatagtcctcagtgagcatctc
gactacgaaaccaaaagatcatacacctttaaagtggaggcctccaacgctcacctggat
ccccggttcctgcaccggggccccttcaaagacactgccaccgtgaaggtcaacgtgctg
gatgtggatgaaccccctgtgttcactaagacctcttacaccatagatgtgtatgaggac
actcctgtgagcaccataattggatctgttacagcgcaggacctagatgcaagtaccagc
gcagttagatactctattgagtggaagaggcctgtggacggctgctttgacattgatact
gtggaagggaccatctccaccaccgagatgttggacagagagagtaataggcagcacaat
atctttgttgtggccactaaagttaacaaccctctcctatccaacaaggtcacagtcaca
gtcaatgtgctggatgtcaacgagttccctccggagctcaccattctctttgacacgttt
gtctgtgaaaatgcaaaagtaggccaggtaattcagaccatcaatgctacggacaaggat
cttcccactgttggacagaagttcttcttcaagtcccccagggaaatcagaaacaggaat
ttcactgtgcgagactttggaaacaacacagcggggatagtgaccaagcgtgtggggttc
cagaggcgggtccaggagtactacgtggtgcctgtggtggtggaggacagtggctaccca
gcccagagcagcaccggcaccctcactgtccgcgtgtgtgcctgtgagactgacggttcc
ctcctgtcctgcacggcagaagcagtctttctaccagtgggtctcagcaccggggcagtg
atggccattttactgtgcatggtcatactcctggtgatcgtggtgctctacgtaggcctg
agacggcagaagaagagggagacattgatgtcgtccaaggaggacatccgggacaacgtg
gtccactatgacgtcgaggggggcggcgaggaggacacccacgccttcgacatgggcacg
ctgaggaacacgaaggccataaaggagaacatgctccgccggggcacagggtcatggtca
gatgtcaccactcaaactgagatcaatgggtcaacccctaccacagaaggcagcactaac
atcatcagggactatattcaccagcgtctccaggagaaccacctgggtttctctgctctc
ccgtatgactcgctggctacatacgcctacgagggggatgggtcagtggcagagtcgctg
agctccatcgagtcgtggacggtggacggccgtgaggacttcagatacctcagcgagtgg
gggccgtccttcaaaacgctggtggggatattagacaaagacaaagcagatcctcccact
gcggaagtggaggagagttga
DBGET
integrated database retrieval system