Oncorhynchus kisutch (coho salmon): 109875288
Help
Entry
109875288 CDS
T09179
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109875288
04518 Integrin signaling
109875288
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109875288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
FitA-like_RHH
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
109875288
NCBI-ProteinID:
XP_020323180
Ensembl:
ENSOKIG00005030375
UniProt:
A0A8C7IGP4
LinkDB
All DBs
Position
LG30:complement(19140842..19224976)
Genome browser
AA seq
1595 aa
AA seq
DB search
MRWFIQVVFSLTCLAICSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDAGDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKFNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAVSDFAVGGRCKCNGHASECVKNNGFDKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLKCNCNGKSAECYFDPELYRATGHGGHCRNCADNT
DGPKCERCLDNHYRDRSGNRCLPCSCNSVGSLATQCDNTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFNCDRCKLGYFNLDPQNPQGCTL
CFCFQHSSVCDSAEGYSIDTVSSTFDKDDEQWTAQQRDGSSVSVQWSAGGEEISLVAEDY
FPMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNA
YPGENMQTFVFRLHDSTDYPWRPTLPQSEFQKLLHNLTSIKIRGTYSERSAGYLDDVMLI
TARRGPGTPARWVEKCTCPQGYMGQHCENCTLGYRRNRPDLGAFSSCDACNCNGHSDTCN
PDTGMCDCQHNTAGLSCERCEDGSYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTN
CPTGTTGKRCELCDDGFFGDPLGENGPVRVCRACKCSDNIDPNAVGNCDRETGECLKCIY
NTDGFFCDRCKEGFYGSPLATNPNDKCKPCSCSLYGTVDRQTTCLQVTGQCPCLAHVINR
DCSACEPGFFNLQSGTGCVRCTCNPIGSTNGQCDISSGQCECQPGVTGLRCERCEVNFFG
FGLSGCKPCDCDPEGSSTTQCKDDGRCECSPGFVGARCDMCEENYFYNRSTLGCQQCPAC
YSLIRDKVNQQRQKLHDLQNLIDNLGSTSEAVSDKAFEDRLKQAEKAIMDLLEEAQTSKN
VDKGLLERLGNLNNTLTTQWNRLQNIRNGVDDTGTQTDKARNRVRDTENLVDRAREELDK
AKDAISKLDIKTPSNTADPNNMTLLAEEARNLADKHKMDADQIEKIAKDANDTSTKALNL
LMKTLDGEGKTNKDIDELNRKYNEAKDLANNLEKQANKVHAEAEEAGDKALKIYSNLTSL
PPFNTKSLEGEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQT
ADQLLARADAAKALAEEAANKGRSTYQEAQDILGNLRDFDKRVNDNKTAAENAMKRIPEI
NATISAANEKTKQAEGALGNADADAKEAKSKAEEAEKIASLAQKGSAKTKVDAEKAFEDT
KKLDGEVNNMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNARKAKSAVRTVL
NTINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMVNSDLDRKLSELNDVAKSQEEMITD
YDRQIKEIQSDIANLNDIKNTLPNGCFNTPSIERP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggtttattcaagttgtgttttcattgacctgtttggctatatgtagccacagt
gctatggatgaatgcactgatgattcgagtcggcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctcccccagaagaa
tactgtgtacaaaccggcgttacgggggtcaccaagtcgtgccacatctgcgatgccggg
gatcggagacaacatcacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcagactatgttagcgggcatccagtatccaaactcaatcaatcta
actcttcatcttggcaaggcttttgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagctttgccatctacaagcgcacaagtgaggatggaccatggacgccctac
cagtactacagtggctcctgtgagaagacctaccagaagttcaacagaggcttcatccgc
accggagaggacgaacagcaggccctctgtacagacgagttcagtgacatctcacccctg
actggaggaaacgtggccttctccaccctcgagggccgacccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagccacagatatcaaagtgaccctgaacagg
ctcaacacatttggagatgaagttttcaatgatcccaaggtcctaaagtcctattactac
gctgtctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgcgagtgagtgt
gtgaaaaacaacggcttcgacaagccggtttgcaactgcaagcacaacacagagggtgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggcgagctacagccaat
aaccctaacgagtgtctgaagtgcaactgtaatggcaagagtgcagagtgctacttcgac
cctgagctgtaccgtgccaccggccacggaggacactgtcgcaactgtgccgacaacact
gacgggcctaaatgcgagcgctgcctggacaatcactacagagaccgatctggcaaccgc
tgcctgccctgcagctgcaactcagtgggctctctggccactcagtgtgacaacacaggg
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaccgctgccaacctggcttc
cacaccttgaccgaagcaggctgcagaccctgctcctgtaacccttctggaagcacacag
gagtgtgacgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcaactgt
gacaggtgtaagctgggatacttcaacctggacccccagaacccgcagggttgcactctg
tgcttctgcttccaacactcctctgtgtgtgacagcgctgaaggttacagcatcgacact
gtttcctccaccttcgacaaagatgatgagcagtggacagcccagcagcgtgacggctcc
agtgtttcagtccagtggtctgctggtggagaggagatttccctcgtcgctgaggactac
ttccccatgtactttgtggctccagagaggttcctgggcaatcagctgctgagctacggc
cagaacctcaccctgaacttccgggtggacaggagagacacacgcctttcagctgaagat
gtggttctggagggtgctggcctcagagtggctgtgcctctcattgctcagggaaatgcc
tatcctggggagaacatgcagacatttgtgttcaggctccacgacagcacagactacccc
tggaggcccaccctccctcagtctgagttccagaagctcctgcacaatctgacatccatc
aagatccgtggcacctacagcgagagaagtgctggctaccttgacgatgtaatgctgatc
acggcgaggagaggtcccgggaccccggcccgctgggtagagaagtgtacctgccctcag
ggctacatgggacagcattgtgagaactgcaccctgggatacaggaggaacagaccagac
ctgggagccttcagttcctgtgacgcctgcaactgtaacggacacagtgacacgtgcaac
cccgacacagggatgtgtgactgccaacacaacacagctggtctcagttgtgagaggtgt
gaagacggttcctatggagactccactgtggggagttccagcgactgcaagccctgcccc
tgccccggaggatccacttgtgctgtcgttcccaagaccaaggaggttgtctgcaccaac
tgtcccacaggaaccacaggcaagcgttgtgagctgtgtgacgacggtttcttcggagac
cccctgggtgagaacgggccggtgagggtgtgtcgggcctgtaagtgtagcgacaacatc
gaccccaacgctgtgggcaactgtgaccgagagaccggggagtgcctcaagtgtatctac
aacacagacggcttcttctgcgaccgctgcaaagagggcttctatggaagccctctggcc
accaaccccaacgacaagtgcaagccctgctcctgctctctgtacggcacagtggacaga
caaaccacctgtctacaggtcacaggccagtgcccgtgtctcgcccacgtcatcaacagg
gactgcagcgcctgtgagcctggcttcttcaacctgcagagcggcacaggttgcgtacga
tgcacctgcaatcctattgggtccaccaatggtcagtgtgacatcagttccggtcagtgt
gaatgccagcccggcgtcaccggtctgcgctgtgaacgctgcgaggtcaacttctttgga
ttcggattgtctggctgcaaaccgtgtgactgcgacccagagggctcctccacgacccag
tgtaaggacgatggccgctgcgagtgcagcccaggctttgtaggagccaggtgtgacatg
tgtgaggagaactacttctacaaccgctctactcttggctgccagcagtgtccagcttgt
tactctctcatcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagaat
ttgattgacaacctgggctctacgtcggaggctgtcagtgacaaggcttttgaggaccgt
ctgaagcaggcagagaaagccatcatggatctgctggaggaggctcagaccagcaaaaat
gtagacaaaggcctgctggagcgcctgggaaacctgaacaacacgctgaccactcagtgg
aaccgtctgcagaacatcaggaacggtgtggacgacacgggaacccagaccgacaaggcc
cgcaaccgggtccgagacactgagaacctggtcgaccgtgcccgcgaggaactggataag
gccaaggacgccatcagcaaactggacatcaaaacaccctcaaacactgcagatcctaac
aacatgacgcttctggcagaggaggctcgcaatctggccgacaaacataaaatggatgcg
gatcaaatcgagaagatcgccaaggatgccaacgacacgtccaccaaggctctcaacctg
ctgatgaagactctagatggcgagggaaagaccaacaaagacattgacgagctcaacagg
aagtacaatgaagcaaaggacctggctaataacctggagaaacaggccaacaaagtgcat
gctgaggcagaggaggcaggcgacaaagccctgaagatctactctaacctgaccagcctg
ccacccttcaacaccaaatcactggagggcgaagcgagcaagatcaagaaggaggcgtca
gacctggacaagctgattgacaagacggagaaggagtacaacgacctgagggacgacctg
agagggaaggagactgaggtccgcaagctgctggagaagggaaagactgagcagcagact
gcagatcagttgctggctcgtgctgatgctgccaaggcactggctgaggaggccgccaac
aaggggaggtccacctaccaggaggcccaagacattctgggaaatctgagagactttgac
aagagggtgaacgacaacaagacagcagctgagaacgccatgaagagaatcccagagatc
aacgccaccatctctgcagccaatgagaagaccaagcaggctgagggggcgctaggcaac
gcagacgcagacgcaaaggaggccaagagcaaggcggaggaggctgagaagatagccagc
cttgcgcagaagggttctgctaagaccaaggtggatgcagagaaggcctttgaggacacc
aagaagctggatggagaggtcaacaacatgatggaccagctaagtgcagcagaggcagag
ctggccaagaagaaggctgaggccgaccaggacatgatgatggctagcatggcatcagac
aatgcgaaggaagctgaggacaacgctcggaaagccaagagtgcagtcaggaccgttctc
aacaccatcaacgacctgcttaagtcactgggcaacattgacaaggtggacctgagcaag
ctgggcttgattgaggggtcgctgaagcaggccaaagacaagatggtgaacagcgacctg
gaccgcaagctgtcggagctgaacgacgtggccaagagccaggaggagatgatcaccgac
tacgataggcagatcaaggagatccagtctgacatcgccaacctcaacgacatcaagaac
acgttacccaacggctgcttcaacaccccatccatagagcgaccttaa
DBGET
integrated database retrieval system