Oncorhynchus kisutch (coho salmon): 109875311 Help Entry 109875311         CDS       T09179                                  Symbol dmxl1 Name (RefSeq) dmX-like protein 1 isoform X1   KO K24155   rabconnectin-3a Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04142   Lysosome Brite KEGG Orthology (KO) [BR:oki00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     109875311 (dmxl1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oki04131]     109875311 (dmxl1) Membrane trafficking [BR:oki04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     109875311 (dmxl1)  Endosome - Lysosome transport   Acidification regulators    Rabconnectin-3 complex     109875311 (dmxl1)    RAVE complex     109875311 (dmxl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Rav1p_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_HPS5 Beta-prop_EML Beta-prop_CAF1B_HIR1 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_SPT8 Motif Other DBs NCBI-GeneID:  109875311 NCBI-ProteinID:  XP_020323216 Ensembl:  ENSOKIG00005006487 LinkDB All DBs Position LG3:11819052..11872373 Genome browser AA seq 3026 aa AA seqDB search MNLHQVLTGAVNPGDNCFSVGSINNQPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV GCVDSSLQGGQVAASYGSIVCVFEPVQLMNQKDRTSAELSYQWQKSGQFVLQSIVRNLAW DPTGTRLLTGSASLQLWSNISDGFDEAGEQTDMTIGDPQCPWRCIWHCKTASPIQLMKFS PDGEFFATAGQDDCLVKVWYGTSKWQSGVTKLFTPPEHNAQGELDFSFVYLAHPRTVTGF SWRKTSKYMPRGSVCNVLLTCCKDSVCRLWAETLLPSDSLLSGHTLSHIHNNGQSSDSLK SSSSKKTPSRIKTQDRNSLELNLQESWRAPLRGVAQPSLTGRLPTQQNSHHNHKTNSVPH ANALCHFHIAASINPATDIPLLPSITSLCGGDDEEPGGPFTVHWLNNKELLLTLAMEVFL QQLRGSVEQNHSENSQEELDYEEVEEASRRAAEGGPDVASTQLPAAAVEHQVEVLLEDWN RGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLSRSVV MYACNKNVDLAIQHGRQRPAGLPHSSSVLIPYGQSKATSYSSSLRLSIFTPNVLMISTHS DGSLNQWAVSFAEESAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRTP DVDSVPAPLTTLSQPFGGGPSRVSLGAVSQDPNAIYSELILWRVDPVGPLSFSGGVSELA RINSLHSSAFSNVAWLPTLIPSNCLGVYCNSPSACFVASDGHSLRLYQAVIEAKKLLSEL SNPDISKYVGKVFNIISQQSTAKPGCIIELDAITDFQGKETQLLHVFEEDLILGSERREA TQEAPAIETASSQPGFSARFFLVVVEFTKTGRSFLHMWHLQLAAGQITMDETGAPPEKEN MTSSPMNSSFSFETFSSPSAQKNKPYTSNLQSASRLTLATHRLYSQELALPDGVEVISVT PSAGHLSASSLQPAGGAPYLLATSCSDGKVRFWRCRVAAVEPDTKELTYTWEEWPLLVEE GLGNSSAVTVSGRPVTVSCCHTSRIAVAYRHNPSPHLSPNHLSPNPQQGVREPLVHVGLF QCESTGGSHWVLEQTLVLDASTPTGNNNNNMESGVKDLNVENNNLDIYLPNDDCLGTSGK SLVHLDWVSREDGSHILTVGIGSKLYMYGLLSGKPPELGLSEGPREQSSSRLVLLRSVDL VSSVEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPALAKSTASNTTTTDMGSVSSL LAAMKQSHEEGLNPVPPKKSLTRSMTSLAQKLSGKRTVYDLPAEMEDYGLFEAAHHLFPT LPQYHPVQLLELMDLGKVRRAKAILSHLVKCIAGEIVALKDNGTNQDKRLRSRTISAGGS TSRDPKLFSKGESSDYTEIDSIPPLPLYALLAADEDCSPKPKDKVASLSGDSGHGSSQTD AYDELFQSSGVGVDDLEHMDSDQEDGGAKVIDLSQYSPTFFGPEHAQVLSSHLLHSSLPG LTRMEQMSLMALADTIATTSTDIRESQSRGKGGETLDECGLKFLLAVRLHTFLLTTLPPA HRAQLLRQGLSTCHYAWAFHSEAEDELLHMLPALQKGDPTWPELRAMGMGWWLRSTNKLR RCIEKVAKASFQRQNDPLDAAIFYLAMKKKAVVWGLYRSQKNAKMTTFFSNNFGEERWRR AALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFETSS TYKRILQRHVLGQDRQLPAHQDPFLRSTAYWVLEDYSRALDTLLEQPAAPNLASSTQAGH TTQPGSTSSTSLCSPEVFNFYTYLRTHPLLLRRHFGSSEKTRVGLTAEGRMANSISLVER RLFFTAAYAHLQAGCPMLALEVLSKMPKVVKRSKLPQDDTTNPDLSETKKEQASDLDWSQ PALNGFESVSDSLSNSQSDSVLSFDWGQPSVSVQDEALELKWDSDKEEEEDEDDEPQGLA MKSADNTSSVFQDAISPLTETLLDEGDFLMPSEDILAAQLKFSACLKILTTELRTLSTGY ELDGGKLRYQLCQWLEREVVALQRCCSYKPCLPELALGMAGPGGEEEAQAHPGEAQRTRR HWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESQQDDGVQSAVAPYLHHASI PLLLACTASAKTVVANPIVHLTNLTHDILHTINALDSPPHPDVVNNEIYVMHTLAASLSA CIYQCLCDGHNHSHVNQFTGIVYQSILSFQHHSVRTVSMEETVLPNTHPAQWPGISTLIR LLNSAGEESQPGLAVLLCEILTAVFLSLFVHGLATHSSNELFRIVAHPLNSKLWVAVFGG GARTPITEKPSKAKSPPAANEEFDRKPRRFKLLSSSPRSASREGPETSSPTSPVVEQETS IFKEHFVPPELSIWDYFIAKPFLPPSESRVEYDSEESQGSQDEDDDDEDEFGDFDPNSPS REHSNPNSYSWCLMRLAMVQLVLGNLKSFYPMAGHDLLDLPVGSPLCHAVLKTLQRWEQV LLKRLEIFGGPPSKYISTHPLDETAASGPAILRHKALFEPSNTPFRSSHHSALPVKRLWQ YLVKQEEVQETFIRNIFTKKRNQNESVEDLNENDKCSGMEEPSCNQSEADLGYPGGKARI IHKDSDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDTEAEAKGDDFL VIQARDDFNTLHGTTPYTHSSLGTPINMPWLGGLQTGRGAAVLIKRNINNVRRMTSHPTL PYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGALRLWQT NTTGNTPKPYLTLQCHNKTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVNPMNSLVHA FSCHESGATVLSLAPRQQLLITGGRKGWISVLELPHRHQRQSFQAHDSPVKALAVDPTEG SFISGSAEGNIKVWSLSTQCLLHQFPNEHARQSLFRNLGTGVMQIEVGPANHIFSCGADG TMKMRILPDRFSVNNGNLKNDVKFII NT seq 9081 nt NT seq  +upstreamnt  +downstreamnt atgaatcttcaccaagtccttactggggccgtcaacccaggggacaattgtttttctgta ggtagcataaacaaccaaccattcacggcatatgcctctggctgtgacgttgtgattttg ggcagtgactttgaaaggctacagatcatcccaggagcgaagcatgggaacatccaggtg ggctgtgtggacagctcactacagggaggccaggttgcagcttcctatggaagtattgtc tgtgtctttgagccggttcagctcatgaatcagaaggacaggacatcagcagaactgagc taccagtggcagaagagtggacagtttgttttgcagtccatagtgcgtaacctggcctgg gaccccacaggcactcgtctcttaactgggtccgctagcctgcagctgtggtccaatatc agcgatggttttgatgaggcaggggaacagacagacatgacaattggtgaccctcagtgt ccctggaggtgtatctggcactgcaaaaccgcctccccaattcagctcatgaagttctct ccagatggagaattctttgctactgccggacaggacgactgtctggtcaaagtgtggtac ggcacgagcaaatggcagtctggcgtgaccaagctgttcaccccaccggagcacaacgct cagggcgagctcgacttctcttttgtctacctggcacacccacgcactgtaacaggcttc tcctggaggaagaccagcaagtacatgccacggggttcagtgtgcaatgttctactgaca tgctgtaaggacagtgtgtgtcgcctgtgggccgagaccctgcttcccagtgacagcttg ctgtccggacacacgctcagtcacattcataataacggacagagcagcgactcactgaaa tcgtcaagcagcaagaagactccctctcgtatcaaaacacaggacaggaattccctggag ttgaatctgcaggagtcgtggagagcccccttgagaggtgtggcccagccctccctaacc ggccgcctcccgacccagcagaacagtcaccacaaccacaagaccaacagcgtgccccat gccaacgctctctgccacttccacatcgctgccagcatcaaccctgccacagatatcccc ctgctgccctctatcacgtcgctgtgtgggggagatgacgaggagcctggcgggcccttc accgtgcactggctcaacaacaaggagctgcttctcaccctggccatggaggtgttcctg cagcagctcagaggcagtgtggagcagaaccactcggaaaactcccaggaggagcttgac tatgaggaggtagaggaggcttctaggcgagcggcagagggaggacccgatgtggcgtcc acccagctgcctgctgcagcggtggagcaccaggtagaggtgctactggaggactggaac agaggggcagacatgctgttcagtatccaccccatggatggctctctgctggtgtggcat gtggactggctggatgaataccagcccggcatgttccggcaggtccaggtgtcctttgtg tcccggattcctgtggccttccccacgggcgacgccaactccctgagccgcagcgtggtc atgtacgcctgtaacaagaacgtggacctagccatccaacatggccgccagcggcctgcc ggcctgccacattcctcgtcggtgctgattccctatggccagagcaaggcgacctcctac tccagcagcctccgcctcagcatcttcacccccaacgtgctcatgatctccacgcactcc gatggctccctcaaccagtgggcggtcagcttcgcagaggagtcggccttctccactgtg ctcagcgtgtcccacaagtcacgctactgcggccaccgcttccacctcaacgacctggcc tgccactccctgctgcccctgttgctcaccacctcacaccacaatgctctgcgtacccct gacgtggacagtgtccccgcccccttgaccaccctttctcaaccctttgggggcgggccc agccgggtgtccctgggcgctgtgtcgcaggaccccaacgccatctatagcgagctcatt ctgtggagggtggatccagtgggacctctgtccttctctggaggggtgtctgagctggcc aggatcaactctctccactcctccgccttctccaatgtagcctggctgcccacacttatc cccagcaactgccttggtgtctactgcaactctcccagtgcctgcttcgtggccagtgac ggtcactcgctgaggctttatcaggctgttattgaagccaagaaactactcagtgagctc tccaacccagatatttcaaaatatgtcgggaaagtttttaacatcatcagccagcaatcg actgctaaaccaggttgtatcatcgagctagatgccattactgacttccaaggaaaggag actcagctgctgcatgtgtttgaagaggatctgattctgggcagtgagcggagagaagcc actcaggaagctcccgctatagagactgcctccagccagccaggcttctccgcccgcttc ttcctggtggtggtagagttcaccaagactggcaggtctttcctgcatatgtggcacctg caactggcagctggccaaatcactatggacgagaccggcgctccgcctgaaaaggagaat atgacctcgtcgccaatgaacagctcctttagctttgagacgttcagctccccctcggcc cagaagaacaagccttacacgtccaacctgcagagtgccagtcgcctcaccctggccact cacaggttgtacagccaggagctagctcttccagatggtgttgaggtgatcagtgtcacg ccctcagcaggtcatctgagcgcatcctccctgcagccggcaggtggcgctccatatctc ctggccacttcctgttcagacgggaaggtgaggttctggaggtgcagggtggctgcagtg gagccagacaccaaggagctgacgtacacctgggaggaatggcctctattggtggaggag gggctgggcaacagcagtgctgtgaccgtgtcaggcagaccagtcacggtcagctgttgt cacaccagccgcattgcagtggcctaccgacacaaccctagccctcacctgagccctaac cacctgagccctaaccctcagcagggtgtcagggaaccactggtccatgtagggttattc cagtgtgagtccacaggtggctcccactgggtgctagagcagaccctcgtcctggatgcc tccactcccactggtaacaacaacaataacatggagagtggcgtcaaggacctgaatgtg gagaataataacctggacatctatctgcccaatgacgactgcctggggacctctggtaag agtctggtccacctggactgggtctccagggaggacggctcccacattcttactgtgggg attggttccaaactctacatgtatggcctgctctctggcaaacctcctgaactgggcctg tctgagggccccagggagcagagctcttcccgcctggtcctcctgcgctccgtggacctg gtctcctccgtggaaggctccctgcccatccccgtctccctgtcctgggtgagagacggc atcctggtggtgggcatggactgtgagatgcacgtgtactcccagtggcaacccccggcc ctggccaagtccacggcctcgaacaccaccaccacagacatgggcagcgtgtcatctctc ctggctgcaatgaaacagagccatgaggagggcctgaaccccgttcctcccaagaagagc ttgaccaggtccatgaccagcctggcccagaagctgagtgggaagaggacagtgtacgac ctgcctgcggagatggaggactacgggctgtttgaggcggcacaccacctgttccccacc ctgccacagtaccacccggtacagctgctggagctcatggacctggggaaggtccggcgg gccaaggccatcctctcccacctcgtcaaatgcattgccggggagattgtggccctcaaa gacaacggcaccaaccaagacaagcgtctccgctcgcgcaccatcagcgccggcggcagc acctccagagaccccaagctcttcagcaagggcgagagctcggactacacagagattgac tccatccctcccctgcccctgtacgcgctgctggcggccgacgaggactgctcccccaag cccaaggacaaggtggccagcttgagtggagacagtggccacgggtccagtcagacggac gcctacgatgagctcttccagagcagcggggtgggtgtggacgacctggagcatatggat agcgaccaggaggacggcggtgctaaggtcatagacctgtctcaatatagccccaccttc tttgggccagagcacgcccaggttctgtccagccacctgctccactccagcctgccgggc ctgacccgcatggagcagatgtccctcatggccctggctgacaccatcgccaccacaagc actgacatccgggagagccagagcaggggtaaaggtggagaaactttggatgagtgcggt ctgaagttcctgttggctgtgaggctccatacgttcctgctgaccaccctgcctcctgcc catcgcgctcagctgcttcgccaaggtctgtccacatgtcactacgcctgggccttccac tccgaggctgaggacgagctgctccacatgttacctgccttgcagaaaggagaccccacc tggcccgagctccgcgccatgggcatgggctggtggctcaggagcaccaataaactccgg aggtgtatagaaaaagtcgcaaaagcgtcttttcaaaggcagaacgatcctctggacgcc gccatcttctatctcgctatgaaaaagaaagcggtggtctggggactgtacaggtctcag aagaatgctaaaatgactacgttcttcagcaacaacttcggtgaggaaaggtggaggagg gctgccttgaagaacgccttctctctgctggggaagcagcgcttccagcactctgcagcc ttctttcttttggcaggctccctcaaggacgctgtggaggtttgcctggagaagatgcag gacctgcagctggccctggtgatctcccggctctatgagtccgagtttgagacgtcctcc acctacaaacgcatcctgcagaggcacgtgctgggccaagaccgccagctccccgcccac caggaccccttcctgcgtagcacggcttactgggtgctggaggactacagccgggccctg gatactctgttggagcagcctgctgccccaaacctagcgtcctctactcaggctggccac acaactcaaccaggtagtacctcgtccacgtccctctgtagcccggaggtcttcaacttc tacacctacctccgcacacatcccttactgctgcgccgccattttggctcgtctgagaag accagggtgggtctgacagcggagggtcgcatggcaaactcaatcagcctggtggagagg aggctgttcttcaccgcagcctacgctcacctgcaggccggctgccccatgctggccctg gaggtcctctccaaaatgcccaaagtcgtcaaaagatccaagctcccccaggacgatacc accaaccccgacctgagcgagacgaaaaaggaacaggcgtcagatttggactggtctcag cccgcgttgaacggcttcgagtctgtgtcagacagcttgtccaatagccaatcggactct gtgctgagttttgactggggccagccctctgtgtcggttcaggatgaagccctggagttg aaatgggacagcgacaaggaggaggaagaggacgaagacgacgaaccacagggcttggcc atgaagagtgccgacaacaccagtagtgtctttcaagacgccatctctccattgacggag acgctgctggacgagggtgacttcctcatgccctctgaggacatcctggccgctcaactc aaattcagcgcctgcctaaagatcctgaccacggagctgcggactctgtccacaggttac gagctggacggggggaagctccgctaccagctgtgccagtggctggagagggaggtggtg gccctgcagaggtgctgcagctacaagccctgcctgccagagctggccctgggaatggca gggccgggtggagaggaggaggcccaggcccaccctggtgaggctcagcgcacccgcaga cactggctacagagcaaccagcctctcctgcgcatgttcctcagctactgcagcttgcac ggctcccacggaggaggcctggcctcggtgcgcatggaactcatcctgctgcttcaggag tctcaacaggatgacggtgtccagtcagccgtcgccccctacctgcaccacgcctccatt cctctcctgctggcctgcactgccagtgccaagacagttgtggccaaccccatcgtccat ctgaccaacctcacccacgacatcctgcacaccatcaacgcactggactccccgccacac ccagacgtcgtcaacaacgagatctatgtgatgcacacactggcagcctcgctgtccgcc tgcatataccagtgtctctgcgacggccacaaccacagccatgtgaaccagttcactggg atagtgtaccagagtatcctctccttccagcaccactcggtacgcactgtgagcatggag gagactgtactgcccaacacccacccagcacagtggccaggtatcagtaccctgatccgc ctgttgaactctgctggtgaggagagccagccaggcctggccgtgttactgtgtgagatc ctgacggctgtcttcctcagcctgtttgtgcacggcctggccactcactccagcaacgag ctgttccgcatcgtggcccacccgctcaacagcaagctgtgggtggctgtgttcggaggg ggggcgcgtacccccatcacagagaagcccagtaaggccaagtcacctccagcagccaat gaggagttcgataggaagcccaggcgcttcaagctgctgtcgtcgtcaccacgcagtgcc tccagagaggggccagagacctccagcccaaccagccctgtggtggagcaagagacctcc atcttcaaagagcactttgtacccccggagctcagcatctgggactactttatcgcaaag cctttcctccctccgtcagagagcagggtggagtacgactcggaggagagccagggcagt caggacgaggatgatgatgatgaagacgagtttggagactttgaccccaactctcctagc cgagaacattccaatcccaactcctacagttggtgtctgatgcgtctggccatggtccag ctggtcctaggcaacctgaagtcattctaccccatggcaggacacgacctactagatcta cctgtgggctctcctctgtgtcacgcggtgctgaaaaccctccagcgttgggagcaggtg ttgctgaagaggctggagatcttcggggggccgccctccaagtacatctccacacaccct ctggacgagacggctgcctcgggccccgccatcctcagacacaaagccctgtttgagccc tccaacacacccttcaggtccagtcaccactctgccctgcctgtgaagaggctgtggcag tacctggtcaaacaggaagaggtgcaggaaacgttcatccgcaatattttcaccaagaaa cgaaaccaaaacgagtcggttgaggacctcaatgaaaatgacaaatgttcagggatggag gagcctagctgtaaccagagcgaggcagatctgggctaccccggaggcaaggcccggatc atccacaaggactcggacatcattaccgccttcgccatcaacaaggctaatcggaactgc ttagtcatggcctccactcatgacatccaggagctggacgtgtcctccatcttggccact cagattctgacgtggatcgatgacgatacggaggccgaggccaaaggtgatgacttcctg gtgatccaggcccgggatgacttcaacaccctccacggcaccaccccctatacccacagc agcctagggacgcccatcaacatgccctggctcgggggcctgcagacggggagaggcgct gccgtgctcatcaaaaggaacatcaacaatgtgagaaggatgacctcccacccaaccttg ccttactacttaacaggagcgcaggacggaagtgtccggatgtttgagtggggccactct cagcagatcatctgcttccgaagtccaggcaattccagagtcacacggatacgattcaac caccaaggaaacaagtttggtatcgttgacgctgacggagccctacgtctatggcagacc aatacgactgggaacacccctaaaccctacctgacattgcagtgccataataagacggct cacgactttgtgttcgtgggctcatcctccctcatagccacagcagggctgtcaacagac aacaggaatgtgtgtctttgggatacattggtgaatccaatgaacagtctagtgcacgcc tttagttgtcatgagtcgggggccacagtgctgtcgctggcccccaggcagcagctgctg atcacaggtggcaggaagggctggatcagcgtgctggagctcccccacaggcaccagcgc cagagcttccaggcccatgactcccccgtcaaggccctggctgtggaccccaccgagggc agcttcatcagcggctctgccgagggcaacatcaaggtgtggagcctgtccacgcagtgc ttactgcatcagttccccaacgagcacgctcgccagtccctgttccggaatctgggcacg ggcgtgatgcagatcgaggtgggcccggccaaccacatcttttcgtgtggtgccgacggt accatgaagatgaggattctccctgaccgcttcagcgtcaacaatggcaatctgaagaac gacgtcaagttcatcatttag

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