Oncorhynchus kisutch (coho salmon): 109875320
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Entry
109875320 CDS
T09179
Name
(RefSeq) cadherin-4
KO
K07597
desmoglein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109875320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109875320
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Major cadherins
109875320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
109875320
NCBI-ProteinID:
XP_020323227
Ensembl:
ENSOKIG00005026096
UniProt:
A0A8C7MKR1
LinkDB
All DBs
Position
LG30:25889961..25909857
Genome browser
AA seq
1177 aa
AA seq
DB search
MARVATATVLLLPFILTFLCVVAAEGGGLKLRRQKREWIIPPKRLKENVDYTSQEYISKI
RSDEQYMSKVTYSLTGIGADQNPRSLFTVNPNTGLVRVNGILDREKIPSYHLLGVATYNN
GSRAEKDIDLHISVEDQNDCQPVFVFGQSGSVNESSAAETVVMKVLATDADEVNTLHSQI
YYSIVQKSSSDSMFAINYQTGEIMVRQTTLDRETQDTYTLTVKGSDMNGAMGGNSGTGQV
VIKILDINDNIPTLEKEYYEGSVLENTVNVEVLRIKATDLDLMYTENWLAVFTIITGNEA
GYFTITTDSKTNEGIIMITKALDYEDLKVLNLAISVSNKAVYYFGSSSTSGGIGGGGVAG
GGMTGGGKTYPIKINVINQKEGPRFQPMVKVVTISEDSTTVTINKVITTYAAIDSDTLLT
ATNVRYAKKSDVDNWLIIDEKTAEIKLNKVPDRESKYLVNGTYYAKIIAITTDLPSKTAT
GTIAIQVEDFNDHCPILTATATTMCLGDTTVYVKAVDGDTFPNGAPFKFRVIQGDSKQKW
TVEHLNATTAILRDHAHMWPGHYKVAVEISDQQGKACADIQILNVDVCTCDQVNKVCFAW
KMGKDVTLGASAILLLLLGLLLLLLVPLLLLFCLCGGVASICDFKAMPFDTKEHLIPYHT
EGKGEDKEIPLLQIPVAIDGSIKVVDLANNGEGMGLIRDAGAAGGSAGGVFGDGFTPSAI
STWEHNHSHGSHQPSGRVKVSYGVGGGTMTGHEHFSRYGAGAYDGVALSEGDLKEYYSAK
ANHAAQNDQQRDDLLIYDYEGQGSPVGSVGCCSLLGADDDLDFLNDLGPKFKTLAKICQG
SIAMEAETVNMSVSSPRPRPTTSTHTEVNRDTALNVNTLNTSSTTSTSSTPLQENLVTRA
QGSATIRKVQENKVMPNKTLFIQQPPMYYAAAPTMYMVEPQPQLVLVEQRGGGGYVRAQQ
AVSQVGVGMGQGVVQVGGLHGSQGMISLERQVGAGGSGEGQGHVVMGASQVLQGAGHTIL
GGGHIITETSQTITRGGQFLQGADQTMIGKDHLSPGGNFSQGSLSGSRKVLVVESGSGSA
SAAGCSAGLGAAQVIMLQRGQGLEVKCHSVEVRGQGDASSLRSSSLCGTAGSNEASATAV
KVTTTPTAAPCSSSHTAVVQEKKISVTEKYVETSTIA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtagccacagccactgttttattattgccgttcatactaacgtttttatgt
gtggtggcagcagaaggcggtgggctgaagctgagaagacagaagagagaatggatcatt
cctcctaagaggttgaaggagaatgtagattacaccagccaagagtacatctcaaagatt
cgctctgatgagcagtacatgtcaaaggtgacttactcactgactgggatcggtgcagat
caaaaccccaggagcctattcactgtcaacccaaatacaggcctggtcagagtcaatgga
attctggacagagagaagataccttcctaccatttacttggagtagcgacatacaacaat
ggaagcagagcagagaaggacattgacctgcatatttccgttgaggaccagaatgactgc
caaccagtgttcgtctttggccaatctggatccgttaatgagtccagtgctgcagaaacc
gttgtcatgaaagttttagccacagatgcagatgaagtgaacacgctacactctcagatt
tactatagcatagtgcagaagagttcttcagatagcatgttcgccatcaactaccagact
ggagagatcatggttcgccagactacgctggacagagagacccaagacacctacaccctg
actgtaaaaggctcagacatgaacggagcaatgggtggaaactcaggaacaggacaggtg
gtgattaaaatcctggacatcaatgacaacatccccaccctggagaaagaatattacgag
gggagtgtgttggagaacacggtcaatgtggaggtgctgaggatcaaagccactgatctg
gacctgatgtacactgagaactggctggctgtgttcaccatcatcacaggcaacgaagcc
ggctacttcaccatcactaccgactccaagaccaacgaaggcattattatgataaccaag
gcactggactatgaggacctgaaagtgctcaaccttgccataagtgtttccaacaaagca
gtgtactactttggctcctcttctacgagtggagggataggaggaggaggggttgcaggc
gggggtatgacgggaggtggtaagacctaccccatcaagataaatgtgatcaaccagaaa
gagggccccagattccagccaatggttaaagtggtgaccatctctgaggactccaccaca
gtcaccattaacaaggtcatcactacctacgcagccattgacagtgacacactactgact
gctaccaatgttaggtatgccaaaaaatccgatgtagacaactggctgatcattgatgaa
aagacagcagagatcaagctgaacaaagtgcctgatcgggagtccaaatacctggtcaat
ggaacatactatgccaagataatagccatcacaaccgatctgccatccaaaacggccaca
gggacaatagctatccaggtggaggactttaacgaccactgtcccatactgacagctacg
gctacgaccatgtgtctgggggacaccactgtgtatgtcaaggctgtggatggggacacc
ttccccaacggagctcccttcaagttcagagtgattcagggggacagcaaacagaagtgg
acagtggagcacctcaatgctaccactgccattttacgagaccatgcccacatgtggcca
ggtcactacaaggttgctgtggagatcagtgaccagcaggggaaggcctgtgcagacatc
cagattctgaacgtggatgtgtgcacctgtgatcaggtcaataaggtctgctttgcctgg
aagatgggtaaggacgtcacattaggagcatctgccatcctgctgctccttctgggcctc
ctgctgttgctgctggtgcccctcctgctgctgttctgtctgtgtggaggagtggcgtcc
atatgtgactttaaggccatgccatttgacactaaagaacacctgattccatatcacacc
gagggaaaaggagaagacaaggaaattccactcctgcaaattcctgtggcgatagatggc
tccatcaaagttgttgacttggcaaacaacggggagggaatgggattaataagagatgca
ggggctgcaggaggatcagcaggaggagtgttcggggacggcttcaccccgtccgcaata
agcacatgggagcacaaccattcccatggctcccaccagcccagcggcagagtgaaggtg
agctacggcgtgggtggaggaaccatgactggacatgaacacttctccagatatggagct
ggagcttatgacggggtcgctctctccgagggagacctaaaggagtactactctgcaaag
gccaatcatgctgcgcagaacgaccaacagagagatgacctactgatctacgactatgaa
ggtcaggggtcaccggtaggctctgttggctgctgcagcctcctgggggccgatgacgac
ctggacttcctcaacgacctggggcccaagttcaagaccctggccaagatctgccagggg
tcaatagctatggaggcggagactgtcaacatgtctgtgtcatcccctagacctaggcct
accacatccacccacacagaggtcaatagagacacagctctcaatgtcaataccctgaac
acctcatccaccacctccacctcctccacacccctacaggagaacctggttactcgggcc
caaggatcagccaccatccgcaaggttcaggagaacaaggtgatgcccaacaagaccctc
ttcatccagcagccccctatgtactacgctgctgcccccaccatgtacatggtggagccc
cagccccagttggtgctggtggagcagagagggggaggtggttatgtccgtgcccagcag
gcggtaagccaggtgggggtagggatgggtcagggggtggtgcaggtaggagggctccat
ggttctcagggcatgatttcactggagaggcaggtaggagcaggtggtagtggggaagga
caaggtcatgttgttatgggggcaagccaggtcttacagggagcgggccacactattttg
gggggaggtcacattattacagagacgagccaaaccattacacggggaggccagtttcta
cagggggcagaccagaccatgatcggaaaagaccatctatcgccaggaggaaacttctca
cagggaagcctgtccgggtccaggaaagtgctggttgttgagagcgggtctgggtcagcc
tcggcagcagggtgcagcgcaggcttaggggctgcccaggtcatcatgctgcagagaggc
caggggttagaggtcaaatgtcatagtgtagaagtgagaggtcagggtgatgcttcctcg
ttgagatccagctccctgtgtggcacggcagggtcaaacgaggcctctgctactgctgtc
aaagtcaccaccacgcccacagctgcaccctgtagcagcagccacacagctgtggtgcaa
gagaagaaaatatctgtcactgagaaatacgttgagaccagtactatagcgtag
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