KEGG   Oncorhynchus kisutch (coho salmon): 109875339
Entry
109875339         CDS       T09179                                 
Name
(RefSeq) probable flap endonuclease 1 homolog
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03030  DNA replication
oki03410  Base excision repair
oki03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109875339
   03410 Base excision repair
    109875339
   03450 Non-homologous end-joining
    109875339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oki03032]
    109875339
   03400 DNA repair and recombination proteins [BR:oki03400]
    109875339
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109875339
DNA replication proteins [BR:oki03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109875339
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109875339
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109875339
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109875339
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-GeneID: 109875339
NCBI-ProteinID: XP_020323255
Ensembl: ENSOKIG00005014883
UniProt: A0A8C7G0H6
LinkDB
Position
LG30:complement(7051074..7058565)
AA seq 351 aa
MGITKLADLIRSDAPGAISYKEICDYTGKVIALDTSIVLNQFRTAVPNLRLLGPLTGLFF
RTLTFLEHDIKPLFVFDGKPPGEKRAVLEKRAQVAGWSSPSHSGAVSPQTRDCLHLLKLM
GVPIIQAPGDGEALCAHLVKQGTVDAVASEDMDTLPFGGNILIRQLNAKKNCEVIEYSLP
KLLDILKMTHEEFVDLCILLGCDYCDKITGLGPKRALTLIQQHRNIENVVLNINRKTHPV
PLFWQYQDARKLFLDAPLTELPNLVWTEPDEEALVHFLCHEKHVKEQRVRGRMQKFSEKR
ERLRKEREEDKAAGQSQQTRMEDFFRVTRKRQQPSETGDSIGTKEKRARPK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggtattacaaaactggcagatttgattcgtagcgatgcacctggtgccatttcttac
aaagagatctgcgactacacaggaaaggtcattgcgttggacacctccattgttctgaac
cagttccgcactgcagtaccaaatcttcggttactgggtcccttgacaggtttgttcttt
cgaacgctaaccttcctggagcatgacatcaaaccattgtttgtgttcgatgggaagcct
cctggagagaaaagggctgtgttggagaagagggcacaggttgcaggctggagctccccc
agtcattcaggagcagtgtcccctcagacacgggactgtctccaccttctgaagcttatg
ggtgtgcccatcatccaggctccaggagatggcgaggcactatgtgcccacctggtgaaa
cagggcacagtagacgcggtagcatcagaagacatggacactttgccctttggtggaaac
attctgatccgccagctcaatgccaagaaaaactgcgaagtcattgagtactctctgccc
aagctgctagacattttgaagatgacacatgaagagtttgtggacctgtgtatcttgttg
ggctgtgactactgtgacaaaatcacaggccttggacctaagagagctctgactctgatc
cagcagcaccggaacatagagaacgtggtgctgaacatcaacagaaagacccaccctgtc
ccactgttctggcagtatcaggatgcccgcaagctgtttttggatgcccccctgaccgag
ctcccgaacctggtctggactgagccagatgaggaggccctggtccactttctgtgccac
gagaaacacgtcaaggagcaaagagtacgaggtcgaatgcagaagttcagtgagaagcgt
gaacgcctgaggaaggagagggaggaggacaaggcagcaggacagagccaacaaactcgc
atggaggacttcttccgtgttacacggaaaaggcaacagccatctgaaactggggattcc
attggcaccaaagaaaagagagcgaggccaaagtga

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