Oncorhynchus kisutch (coho salmon): 109875345
Help
Entry
109875345 CDS
T09179
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00601
Glycosphingolipid biosynthesis - lacto and neolacto series
oki01100
Metabolic pathways
Module
oki_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
oki_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109875345
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oki01003
]
109875345
Enzymes [BR:
oki01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
109875345
Glycosyltransferases [BR:
oki01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
109875345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Orthopox_A43R
Motif
Other DBs
NCBI-GeneID:
109875345
NCBI-ProteinID:
XP_020323261
Ensembl:
ENSOKIG00005024206
LinkDB
All DBs
Position
LG30:9001406..9015724
Genome browser
AA seq
387 aa
AA seq
DB search
MFVNFRRIRKCQCVQLMTTCLVLSVVMVCWEQLDSGMVSHINSYSYRYLVNSYTFINKSF
TIPRQEAHMFSNHRYLLNHPYKCSGEKDILLLLLIKSSPENFERRRAIRSTWGNETYIRQ
DLGVTVKVMFVLGLPKQHETAQTWRGRSGGIQDSLVDEDRRHGDMVQQDFVDTFHNLTLK
LLLQFRWAHFYCPHARFLMTADNDIFVHMPNLVRYLQDMDRKGVTDFWIGHVHRGAPPIR
QKESKYYVPQEMYPWASYPDYTAGAGYVVSRDVADKIYQASLTLNASLYIDDVFMGICAN
AMGVSPQEHVYFSGEGKAPYHLCIYDKMMTSHGHVADIYELWEAATNPEVKRVTSGLFGR
LYCTAVKLTLLCRPYFFNTYPCKAALL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgaatttccggcggatccgcaagtgccagtgcgtgcagttgatgaccacatgc
ctggtgctgtcggtggtgatggtatgctgggagcagctggacagtggcatggtgagccac
atcaactcctactcttaccgctacctggtcaacagctacactttcatcaacaagagcttc
accatcccacgacaggaggcccacatgttcagtaaccaccgctacctactcaaccacccg
tacaagtgttcaggagagaaggacattttactgcttctgctcatcaagtcctccccggag
aacttcgagagacggcgagccatacggtcgacgtggggcaacgagacctacattcgccaa
gacctgggggtgacggtgaaggtgatgtttgtgctgggccttcccaagcagcatgagact
gcccagacgtggagggggaggagcggaggcatccaggacagcctggtcgatgaggaccgc
aggcatggcgacatggtccagcaggactttgtggacacgttccacaacctcaccctcaag
cttctgctacagttccgctgggctcatttctactgcccgcatgcccgattcctcatgacg
gctgacaatgatatcttcgtgcacatgcccaacctggtgcgctacctgcaggacatggac
aggaagggcgtgacggacttctggatcggtcacgtgcacagaggcgcgccaccgatccgc
cagaaggaaagcaagtactacgtcccgcaagagatgtacccttgggcgtcatacccggac
tacacggcaggggccggttacgtcgtctcaagagacgtggcggacaaaatctaccaggcc
tcattgacgctcaatgcctcgctgtacattgacgatgtcttcatgggcatctgtgccaat
gccatgggcgtgtcgccacaggaacacgtgtacttctcaggcgaaggcaaggcgccctac
cacttgtgcatctacgacaagatgatgacatcgcacggccatgtggccgacatttatgag
ctctgggaagccgccacaaacccggaggtcaaaagggtcacatcgggactttttgggagg
ttgtactgcacggcagtgaaactcacccttctgtgcagaccctacttcttcaacacctac
ccctgcaaggcagccttgttgtag
DBGET
integrated database retrieval system
