Oncorhynchus kisutch (coho salmon): 109875576
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Entry
109875576 CDS
T09179
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109875576
Membrane trafficking [BR:
oki04131
]
Protein recycling
Others
EARP complex
109875576
Endosome - Golgi transport
Tethering complex
GARP complex
109875576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
hAT-like_RNase-H
Laminin_II
PsaD
VPS51_Exo84_N
NBD94
Motif
Other DBs
NCBI-GeneID:
109875576
NCBI-ProteinID:
XP_020323515
Ensembl:
ENSOKIG00005010922
LinkDB
All DBs
Position
LG18:30307968..30339640
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AA seq
831 aa
AA seq
DB search
MMMEEEELEFSEDLEAILHLIPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLA
NIDEVVNKIRLKIRRLDDNIRMVVRGQTNVGQDGRQALAEAQVAIGQLFGKIKDIKDKAE
KSEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQ
GVVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPAQGSKRAGGPSNVLR
DACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYE
EKYGRMFPEEWCMTERIAVEFCHITRTELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLA
KRFSGCTLTDGPGVKKPEPPLESTNPFLEDEVGDDGSEMEEDLDRPKKHKAPDNPFHGII
SKCFEPHLYVYIESQDKNLGEMIDRFVSDFRAQGPPKAGTEDGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSNSGGLTIKSLLQEKEGSEA
AKFNVEELCLICSILSTAEYCLATTQQLEEKLKEKVDKTLVERINLTGEMDTFSNVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRGNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKTLDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGPSLSFSTPTPEQENSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggaggaagaattggaattttcggaggatttggaggctattttgcatctt
attccggaggtgcagttggccatcgagcaggttttccccagtcaagacccattggacaga
gcagattttaatgctgtggaatacatcaatacattgtttcccactgagcagtcactggca
aatatagatgaagtggtcaacaagatccgtctgaagattcggcgtctggatgacaacatc
aggatggtggtgagaggtcagaccaacgtgggtcaggatggcagacaggcactggcagag
gcccaggtagccatcggccagctctttggcaaaatcaaagacattaaggacaaggctgag
aaatctgagcaaatggtcaaagagataacgcgggacatcaaacagctggaccatgctaag
cgtcacctgaccacctccatcaccaccctcaaccacctgcacatgctggccgggggcgtt
gactctctagaggccatgacgaggaggaggcagtatggcgaggtggctaacctgctacag
ggggtggtcaacgtgctggaacacttccacaaatacatgggcatccctcagatcagacag
ctctcagagagggtgaaagcagcccaaagtgagctggggactcagatcctggcagacttc
gaagaggccttccccgctcaggggtcaaagagagcagggggacccagtaacgttctgagg
gatgcctgtctggtggccaacgtcttggaccctcgcatcaaacaggagatcatcaagaag
ttcatcagacagcacctctctgagtacatggtgctcttccaggagaaccaggacgtagct
tggctggataagatcgaccggcgctacgcctggattaagcgtcagctggtggactatgag
gagaagtacggacgcatgtttcctgaagagtggtgtatgaccgaacgcatcgctgtagag
ttctgccacatcaccaggacagagctggccaaagtaatgcggacgcgagccaaagagatt
gaggtcaagctgcttctgtttgccattcagaggaccaccaacttcgaggggctgctcgcc
aagcgcttctctgggtgcaccctcaccgacgggcccggggtgaaaaagcctgagccacca
ctggagtccaccaaccctttcctggaggacgaggttggagatgatggttcagagatggag
gaggatctggataggcccaagaagcacaaggctcctgacaaccccttccatggcataatt
tccaagtgctttgagcctcacctctatgtctacatcgagtctcaggacaagaacctgggg
gagatgattgaccgttttgtgtcagacttccgggcgcagggcccccccaaggcgggcacg
gaggacgggggagcagtgctgcccagctgtgctgacctgtttgtctactataagaagtgc
atggtgcagtgctcccagctcagcacaggggaacctatgatcgccctcaccaccatcttc
cagaagtacctcagagagtatgcctggaagatactgtctggaaacctgcccaagactagc
agtaatagtggaggactgaccatcaagagtctactgcaggagaaggagggttcggaggct
gctaagttcaatgtagaggagctgtgtctcatctgtagcatcctcagtactgcagagtac
tgtctagccaccacacagcagttggaggagaagctgaaggagaaggtggataagactctg
gtggagagaatcaacctgactggagagatggacaccttcagcaatgtgatttccaacagt
atccagttgcttgttcaggacctggacgctgcctgtgatcctgctctcactgccatgagc
aagatgccatggcagagtgtagaacatgtaggtgaccaaagtccctacgtgacgtcagtc
atcatgcacatcaaacagaacgtccccatcatcagagggaacctggcctccacacgaaaa
tacttcacccagttctgcatcaagttcaccaactcttttattcctaaattcatcaaccac
ttgttcaggtgtaagcctatcagcatggtgggggctgaacagctcctcctggacacccac
tccctgaagacagtgttgttggatctgccctctatagggtctcaggtggtccgcaaggcc
ccagccagctacaccaagatagtcgtgaaggggatgacccgcgctgagatgatcctcaag
gtggtcatggccccccatgaaccctccgtggtgtttgtggataactacatcaagctcctc
gctgatggaaacccagagaccttccagaaaactctggatatgaaggggttgaagcgcagt
gagcagagcagcatgttggagctcttcagacagaggttacccactccaccctcaggggcc
gatggaggcccctctctttccttcagcacccccacccccgagcaggagaactcgcgcata
cgcaaactggagaagctcatcaaaaagagactatga
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