Oncorhynchus kisutch (coho salmon): 109875624
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Entry
109875624 CDS
T09179
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109875624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109875624
Membrane trafficking [BR:
oki04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
109875624
Endosome - Golgi transport
Arf GTPase associated proteins
109875624
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
109875624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_3
PH_6
PH_8
RA
PH_13
RNR_Alpha
Ras_bdg_2
NICE-1
Motif
Other DBs
NCBI-GeneID:
109875624
NCBI-ProteinID:
XP_031663597
Ensembl:
ENSOKIG00005035670
LinkDB
All DBs
Position
LG28:complement(16916757..16931549)
Genome browser
AA seq
1125 aa
AA seq
DB search
MADNEDALRAMQNCFHSQFSVDEAEYEDIEENRRTSVDEDSIYLGCTLSQSFNPDFHHSP
VIKMGWLHKTPPQGTLVFQKRWVMLDAQYLRYFQNEKEVYSKRIIAILSVTKVLNVGGQK
FEVVTRNRTFLFRAENNTVREEWVSVLKETIQQHCNSMEKSLMNSSDTRGQRASRVSLIS
KQGYLEMSGLRSKLYVVICADSVFLYRNAEEHSQGVGITSIEMNLGTVKGTDKRSFNLTT
IYRTFSFVAESEQQREQWVEVLQACVSHSLSSNAVAQKIWSEEANQRCADCGAPHPDWAS
VNLCVVLCKCCAGVHRGLGQSVSKVRSLKMDENAWTENQLFLLLGNDKVNLFWAANIPPS
EMLCPSSDSEERQRFVTAKYCQGKYRCYHALFGQQEALNKALCNTIQTGDVLETLSLVFC
GADVNCYTGDPELPSPVSVAQHYGQTLQVEFLTHNHNTELPGSRAGDHTILEAALPISHT
GYLFKTASSTRAVTERKSKGDFSRRWCSLNQGNFSYYESEKSSSQSGQMKMSDVLCLVVN
PQGKHGYGHSFELYHDSGRVYLFGEDSPDTVREWIKVIGKALVPPVAEDLVGWSFERVGR
LRYTVGQSFHCPCLGWFSLGGSRLLLLLHGEDQVDNIDLRKLQELSVEQEAGAVVLVDRG
RRLRLEGDRRPDYQGWLSGIQQGLGRGDGPLDQQQLTETEVPVIVDRCISYITQHGLKSE
GIYRRCGVNSKIAALLLSLRHDARQVRLSEGVCQVDNVANVLKRFLREVGEGVFNGHQAS
LPWLHTTTVSERRERVSQYKALLHSLPPVNRATLGAVINHLYCVQCFADENQMNMHNLAI
VFGPTLFQTDGTDNSAGQVVEELIQNYQDIFNVNAEQLQRQLDMISHVIKAQEEHAEEGT
PSPLTICGIYLERKEEGSELLVQISQAVSAEELVCEVLRRGNIPPQQGDYWSCFLVNDNQ
EMERPLHYQERALAIYFSLGKDCHLVVKRNCYMEAMLIYIAAMVDVSRNSMIKFSDEKGQ
RGKRTFSRRLCVLDGTSLRLYKEVKSTQPERECQVHALKVYYGIKKRLQPPSCWGMTVVC
EQAERDKQQWYLCCESKNELIKWLATFMNLQHNSDLCPAASRPDS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgaggatgcattgcgggccatgcagaactgtttccacagtcagtttagt
gtggatgaggctgagtacgaggacattgaggaaaacaggagaacatctgttgatgaagac
agtatctatcttggctgcacactgtcacaatccttcaaccctgattttcaccactcacct
gttatcaagatgggctggctgcacaagactccgcctcaggggacccttgttttccagaag
cgttgggtgatgttggatgcacagtaccttcgatactttcaaaatgagaaggaggtctac
tcaaagcggatcatagccatactgtctgtcactaaagtgcttaatgttggaggacagaag
tttgaggtggtgacaaggaacaggactttcttgttccgtgctgagaacaacaccgtcagg
gaggaatgggtgtcagtactgaaagagactattcagcagcattgtaacagcatggagaag
tcccttatgaactccagtgatacgcgtggacagcgtgctagtagagtctcgctcattagt
aagcaaggatacctggagatgagtggactgcgctccaagctctatgtagtcatctgtgcc
gacagtgttttcctctataggaacgctgaggagcacagccagggtgttggcatcacctcc
attgagatgaatttgggtactgtgaagggcacagacaaacggtccttcaacctcaccacc
atctacaggacattcagttttgtggccgagtcggagcagcagagggagcagtgggttgag
gtcctgcaggcctgtgtcagtcactctctgtccagcaacgcggtggcccagaagatctgg
tctgaggaggctaaccagcgctgtgcagattgtggcgccccccacccagactgggcctct
gtcaacctgtgtgtggtcctctgcaaatgctgtgcaggggtgcacaggggcctgggccag
agtgtgtccaaagtccgcagtctgaagatggatgaaaatgcgtggactgaaaatcagctg
ttcctgttgctaggtaacgacaaagtaaaccttttctgggcagctaacattccaccaagt
gagatgctctgtccatcaagtgacagtgaggagcgccagcgctttgttactgccaagtac
tgccaggggaaataccgctgctaccatgcactatttggccaacaggaagccctcaacaag
gctctgtgcaacaccattcagacaggtgatgtattggagactctgtcgctggtgttctgt
ggagcagatgtgaactgttatacaggtgatccagagctgcccagccctgtgtccgtggcc
cagcactatggacagactcttcaggtggagttcctcactcacaaccacaacacagagctc
ccagggtcaagggctggagatcacacaatcttagaggctgctctccccatctcacacact
ggttatctgttcaagactgcctcctcaacacgagcagttacagagcgcaaatctaaagga
gattttagtcgtcgctggtgctctttgaaccaaggtaacttcagctactatgagagtgag
aagagctccagccagagtggacagatgaagatgagtgatgtcctttgtctggtggtcaat
ccccaagggaaacatggttatggtcattcctttgagctgtaccatgactctgggagagtc
tacctgtttggagaggattcccctgacacggtgagggagtggatcaaggtcattggcaag
gccctggtcccccctgtagcagaggacctggtgggctggtcctttgagcgggtgggccgg
ctgcgctacactgtgggccagagcttccattgtccttgcctgggctggttctccctgggg
ggctccagactgctcctcctcctccacggagaagaccaagtggataacatcgacctgcga
aaactacaggagctctccgtggagcaagaagctggtgctgtggtgctggtggacagaggc
aggaggctgcgtttggagggggacaggaggcctgactaccagggctggctgagtggcatc
cagcagggcttagggagaggagacggccccctggaccagcagcagcttactgagacagaa
gtccctgtcatcgtggaccgctgcattagctacatcacacagcatggtttgaagtcagag
ggcatctatcggaggtgtggtgtgaactctaagatcgccgccctgctcctctctctccgc
catgacgcccgtcaggttcgtctgagtgaaggggtgtgccaggtggataatgtggccaac
gtcctgaagagattcctcagggaagttggagagggggttttcaatggccatcaggcctct
ctgccatggctccataccactactgtcagtgagagaagagagagagtgtcccagtacaag
gcccttctccacagcctccccccagtcaacagagccactctgggggctgtcatcaaccac
ctctactgcgttcagtgctttgcagatgagaatcagatgaacatgcacaacctggccatt
gtgtttggtcccacgctcttccagacggacggcactgataacagtgcaggacaggtggta
gaggagctcatccagaactaccaggatatcttcaatgtgaatgctgagcagcttcagagg
cagctggacatgatctctcatgtcatcaaagcacaggaggaacacgccgaggaggggacc
ccctcacctctcaccatctgtgggatttacctggagaggaaggaggagggctctgagctg
ctggttcagatctcccaggcagtgagtgctgaggagctagtgtgtgaggtcctgagacgc
gggaacatccctccacagcagggggactattggagctgcttcctggtcaacgacaaccag
gagatggagcgtccattgcactaccaggaacgagcgctggccatctatttctctctgggt
aaagactgtcacctggtggtcaagcggaactgctacatggaggccatgttaatctacata
gctgccatggtagacgtgtccagaaacagcatgattaagttcagtgatgagaagggtcaa
agggggaagagaaccttcagcagacgcctctgtgtactcgatggcacctctctcaggctc
tacaaagaagtaaagagtactcagcctgagagggaatgtcaagtccatgctctgaaagtc
tactatggcatcaagaagaggctacagccaccatcatgctgggggatgactgtagtgtgt
gagcaggcagaacgagacaaacagcagtggtacctgtgctgtgaatcaaagaacgaattg
atcaagtggctggccacttttatgaacctccagcacaatagtgacctgtgtcctgcagct
tccaggccagattcctga
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