Oncorhynchus kisutch (coho salmon): 109875708
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Entry
109875708 CDS
T09179
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109875708
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
DUF7859
Motif
Other DBs
NCBI-GeneID:
109875708
NCBI-ProteinID:
XP_020323718
Ensembl:
ENSOKIG00005038010
UniProt:
A0A8C7JV38
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Position
LG24:complement(40165427..40199927)
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AA seq
818 aa
AA seq
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MGVLAHCVIIFIFQHLTSSYDFKEGQYNSGQYEFVKDPSLNIEKRSPDLDPFDSESSDHI
RSRRSADQGDCNRLQGFDTKLTNNTQTYSFNDLSGSVSLAWVGDATGVILALTTFQVPFF
MLRFGQSKLYRSENYGKSFQDVTNLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLGSR
IFISRDFGNSFEQQDLPFNPLMQIIYNPIDANVLLVISNTNELWLSEDFGEKWRKIHDMV
CLAKWGMDSNLFFTTNLNGSCNERGMLDLRKTADYGKTIKTVAIKIFSFGLGGKFLFASV
MTGTGTLRMIHVSTNQGEDWNMAQLPPVGHEEFYSILSANDDMVFMHVDEPGDTGYGSIY
VSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSILAEDGSVQSVVSFDQGGEW
VPLQKPANTKCDSTAKDPDKCSLHIHAAYSTAMKLNVPMLPLSEPNAVGLIMAHGSVGDA
ISVMKPDVFVSDDGGYTWLQALEGPHHYAILDSGGLLVAVEHSAQPIKDIKFSTDEGQCW
HVHQFTSDPIHFTGLASEPGARSMNVSVWGYRDSLLSQYWVSVTIDFRELLTRDCEDQDY
VQWLAHSDDISDPNDGCMLGYKEKFLRLRKASVCLNGRDYEVNKQPAPCPCTLDDFLCDF
GYYRKENSSECVEQPDLKGHVLEFCLQGKKELLQTRGYRKIPGDKCEGGTQPERKEIDLS
KRCVNDLLGPQELLTDGHLSSSAPIVVTVLIIILLSVVAGFLFVKKYVCGGRFLVHRYSV
LQQHAEAQGDGVDEPLDSNHTRASNKTGLHDSDEDLLE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggagttctggcgcactgtgttattatttttatattccagcatttgacgtcatcttat
gattttaaagaaggacaatataacagcggtcagtatgaatttgtgaaagatcccagtttg
aatatcgaaaagagatcaccagatttagatccgtttgattctgaatcatccgaccacatt
aggagcagaagaagtgcggatcaaggagactgtaaccgtctccagggattcgacaccaag
ttgactaacaacacccaaacctattccttcaatgacctgagtgggtccgtgtcactggcc
tgggttggagacgccaccggggtcatcctggctctgacaacattccaggtgccgttcttc
atgttgcgattcggtcagtctaaactctatcgaagtgagaactacgggaagtcgttccag
gacgtcacaaacctcatcaacaacactttcatccggacagagttcggcatcgccatcgga
ccagagaactctgggaaggtgatcctgacaggtgatgtgtctggcagcctgggctctcgt
atctttatctccagagactttgggaacagctttgagcagcaggaccttcccttcaacccc
ctgatgcagatcatatacaaccccatagatgccaacgttctcctggtcatcagcaacact
aatgaactctggctgtctgaggactttggggagaagtggaggaagatccacgacatggtg
tgtttggccaaatgggggatggacagtaatctattctttaccaccaacctcaatggatcc
tgcaatgaaagggggatgctagacttgagaaagacggcagactacgggaagaccatcaag
actgttgccattaaaatcttctctttcggcctggggggaaagttcctgtttgcttctgtt
atgactggaactggcactctgaggatgatccatgtgtcgactaaccagggggaggattgg
aacatggctcagctgcctccggttggccacgaggagttctattctatcttgtcagccaat
gacgacatggttttcatgcacgtggatgaaccaggagacacaggctacggcagcatctac
gtgtcagacgacaggggtacggtgtactctaagtctctggagcgtcacctctacaccacc
acagggggagacactgacttcaccaacgttacctctctacgaggggtcttcatcaccagt
atactggcagaggacggctcggtgcagtccgtggtgtccttcgaccagggaggggaatgg
gtgcccctgcagaaacctgccaacaccaaatgtgactccacagccaaagacccagacaag
tgcagtctccacatccacgcagcttacagcacggctatgaagctgaacgtccccatgctg
cctctcagtgaaccaaatgctgtaggactcatcatggctcacgggagtgtgggcgatgcc
atctctgtgatgaagcctgacgtattcgtgtcagatgatggaggttacacctggctacag
gccctggagggaccacaccactatgccatcctggactctggtggactcctggtggccgtg
gagcactctgctcagcccatcaaagacatcaagttttccacagacgagggccagtgctgg
cacgttcaccagttcactagcgatcccatccacttcacagggctagcatcggagccgggg
gcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcagtactgg
gtatcagtcaccatcgacttcagagagctgctcactagagactgtgaggaccaagactac
gtgcagtggctggcgcactctgatgacatcagcgaccctaacgacggctgtatgttgggt
tacaaggagaagttcctgcgtctgaggaaggcctctgtctgcttgaacggacgggactat
gaggtcaacaagcaacccgccccttgtccctgcaccctggatgactttctgtgtgacttt
gggtactatcgtaaagagaacagctccgagtgtgtggagcagccggacctgaagggccac
gttctggagttctgtctgcaaggcaagaaggagctgctgcagaccagaggctataggaag
atccctggggataagtgtgagggaggaacacagccggaaagaaaagagatagacctcagt
aagaggtgtgtcaatgacctactgggacctcaggaactactgacggacggccatctgtcc
agctcagcgcccatcgtagtgacggttctgattattatcctgctcagtgtcgtggccggg
ttcctctttgtcaagaagtacgtctgcggtggaaggttcctggtacacaggtactctgtc
ctacagcagcatgctgaggcccagggagacggagtagacgagccattagacagcaaccac
actcgggctagcaacaagaccggcttacacgattcagacgaggatcttctggagtaa
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